RNA–Protein interactions for RNA: ENST00000638604.1

GABRD-203, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5

Gene GABRD, Length 2,377 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-203ENST00000638604 NISCHQ9Y2I1 1504 aa37.01■■■■□ 3.52
GABRD-203ENST00000638604 CCDC180Q9P1Z9 1646 aa31.9■■■□□ 2.7
GABRD-203ENST00000638604 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
GABRD-203ENST00000638604 SHROOM4Q9ULL8 1493 aa30.84■■■□□ 2.53
GABRD-203ENST00000638604 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
GABRD-203ENST00000638604 DCAF1Q9Y4B6 1507 aa30.54■■■□□ 2.48
GABRD-203ENST00000638604 SUPT5HO00267 1087 aaKnown RBP30.03■■■□□ 2.4
GABRD-203ENST00000638604 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
GABRD-203ENST00000638604 ABCC9O60706 1549 aa29.69■■■□□ 2.34
GABRD-203ENST00000638604 NACADO15069 1562 aa29.59■■■□□ 2.33
GABRD-203ENST00000638604 SCRIBQ14160 1630 aa29.55■■■□□ 2.32
GABRD-203ENST00000638604 RB1CC1Q8TDY2 1594 aa29.2■■■□□ 2.26
GABRD-203ENST00000638604 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
GABRD-203ENST00000638604 RSF1Q96T23 1441 aaPredicted RBP28.99■■■□□ 2.23
GABRD-203ENST00000638604 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
GABRD-203ENST00000638604 MROH2BQ7Z745 1585 aa28.64■■■□□ 2.18
GABRD-203ENST00000638604 UNC13AQ9UPW8 1703 aa28.61■■■□□ 2.17
GABRD-203ENST00000638604 BAZ1AQ9NRL2 1556 aaPredicted RBP28.53■■■□□ 2.16
GABRD-203ENST00000638604 WIZO95785 1651 aa28.47■■■□□ 2.15
GABRD-203ENST00000638604 LOC105371045A0A1W2PR82 267 aa28.33■■■□□ 2.13
GABRD-203ENST00000638604 SMARCA4P51532 1647 aa28.31■■■□□ 2.12
GABRD-203ENST00000638604 HRCP23327 699 aa28.3■■■□□ 2.12
GABRD-203ENST00000638604 PCGF6Q9BYE7 350 aa28.29■■■□□ 2.12
GABRD-203ENST00000638604 BICRAQ9NZM4 1560 aa28.27■■■□□ 2.12
GABRD-203ENST00000638604 PABPN1Q86U42 306 aaKnown RBP eCLIP28.18■■■□□ 2.1
GABRD-203ENST00000638604 TRIM41Q8WV44 630 aa28.16■■■□□ 2.1
GABRD-203ENST00000638604 TOP2AP11388 1531 aaKnown RBP28.15■■■□□ 2.1
GABRD-203ENST00000638604 SMARCA2P51531 1590 aa27.91■■■□□ 2.06
GABRD-203ENST00000638604 CCDC88BA6NC98 1476 aa27.91■■■□□ 2.06
GABRD-203ENST00000638604 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
GABRD-203ENST00000638604 PEG3Q9GZU2 1588 aa27.88■■■□□ 2.05
GABRD-203ENST00000638604 PPARGC1BQ86YN6 1023 aaKnown RBP27.82■■■□□ 2.04
GABRD-203ENST00000638604 FAM9AQ8IZU1 332 aaPredicted RBP27.71■■■□□ 2.03
GABRD-203ENST00000638604 ATAD2BQ9ULI0 1458 aa27.68■■■□□ 2.02
GABRD-203ENST00000638604 TRIM26Q12899 539 aaPredicted RBP27.65■■■□□ 2.02
GABRD-203ENST00000638604 BAZ1BQ9UIG0 1483 aaKnown RBP27.6■■■□□ 2.01
GABRD-203ENST00000638604 ABCC8Q09428 1581 aa27.57■■■□□ 2
GABRD-203ENST00000638604 EHMT2Q96KQ7 1210 aa27.48■■□□□ 1.99
GABRD-203ENST00000638604 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
GABRD-203ENST00000638604 NCAPD3P42695 1498 aa27.3■■□□□ 1.96
GABRD-203ENST00000638604 WRNQ14191 1432 aaPredicted RBP eCLIP27.3■■□□□ 1.96
GABRD-203ENST00000638604 EEA1Q15075 1411 aa27.25■■□□□ 1.95
GABRD-203ENST00000638604 SOGA1O94964 1423 aa27.2■■□□□ 1.94
GABRD-203ENST00000638604 SYNJ1O43426 1573 aa27.14■■□□□ 1.93
GABRD-203ENST00000638604 CSRNP3Q8WYN3 585 aa27.1■■□□□ 1.93
GABRD-203ENST00000638604 RUSC2Q8N2Y8 1516 aa27.04■■□□□ 1.92
GABRD-203ENST00000638604 ZEB1P37275 1124 aaPredicted RBP26.98■■□□□ 1.91
GABRD-203ENST00000638604 TNIKQ9UKE5 1360 aa26.97■■□□□ 1.91
GABRD-203ENST00000638604 TOP2BQ02880 1626 aa26.96■■□□□ 1.91
GABRD-203ENST00000638604 GOLGA3Q08378 1498 aa26.93■■□□□ 1.9
GABRD-203ENST00000638604 CFTRP13569 1480 aa26.9■■□□□ 1.9
GABRD-203ENST00000638604 BIVM-ERCC5R4GMW8 1640 aa26.9■■□□□ 1.9
GABRD-203ENST00000638604 CEP162Q5TB80 1403 aa26.9■■□□□ 1.9
GABRD-203ENST00000638604 UBTFP17480 764 aaKnown RBP26.89■■□□□ 1.89
GABRD-203ENST00000638604 CEP164Q9UPV0 1460 aa26.85■■□□□ 1.89
GABRD-203ENST00000638604 KIF21BO75037 1637 aa26.84■■□□□ 1.89
GABRD-203ENST00000638604 CC2D2AQ9P2K1 1620 aa26.84■■□□□ 1.89
GABRD-203ENST00000638604 PRDM2Q13029 1718 aa26.78■■□□□ 1.88
GABRD-203ENST00000638604 CUX1P39880 1505 aa26.73■■□□□ 1.87
GABRD-203ENST00000638604 CADPSQ9ULU8 1353 aa26.7■■□□□ 1.86
GABRD-203ENST00000638604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.63■■□□□ 1.85
GABRD-203ENST00000638604 RAPGEF2Q9Y4G8 1499 aa26.6■■□□□ 1.85
GABRD-203ENST00000638604 TTBK1Q5TCY1 1321 aaPredicted RBP26.58■■□□□ 1.85
GABRD-203ENST00000638604 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
GABRD-203ENST00000638604 CLIP1P30622 1438 aa26.54■■□□□ 1.84
GABRD-203ENST00000638604 ERICH3Q5RHP9 1530 aa26.53■■□□□ 1.84
GABRD-203ENST00000638604 PRXQ9BXM0 1461 aa26.5■■□□□ 1.83
GABRD-203ENST00000638604 CCER1Q8TC90 406 aaPredicted RBP26.48■■□□□ 1.83
GABRD-203ENST00000638604 FANCD2Q9BXW9 1451 aa26.42■■□□□ 1.82
GABRD-203ENST00000638604 VPS8Q8N3P4 1428 aa26.38■■□□□ 1.81
GABRD-203ENST00000638604 FGD5Q6ZNL6 1462 aa26.35■■□□□ 1.81
GABRD-203ENST00000638604 CUX2O14529 1486 aa26.34■■□□□ 1.81
GABRD-203ENST00000638604 RANGAP1P46060 587 aaPredicted RBP26.3■■□□□ 1.8
GABRD-203ENST00000638604 APLP2Q06481 763 aa26.28■■□□□ 1.8
GABRD-203ENST00000638604 LAMC3Q9Y6N6 1575 aa26.28■■□□□ 1.8
GABRD-203ENST00000638604 DNMBPQ6XZF7 1577 aa26.28■■□□□ 1.8
GABRD-203ENST00000638604 NESP48681 1621 aa26.26■■□□□ 1.79
GABRD-203ENST00000638604 IGF1RP08069 1367 aa26.23■■□□□ 1.79
GABRD-203ENST00000638604 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
GABRD-203ENST00000638604 SCAF1Q9H7N4 1312 aaKnown RBP26.16■■□□□ 1.78
GABRD-203ENST00000638604 ARAP1Q96P48 1450 aa26.15■■□□□ 1.78
GABRD-203ENST00000638604 CARMIL1Q5VZK9 1371 aa26.14■■□□□ 1.78
GABRD-203ENST00000638604 POLA1P09884 1462 aaPredicted RBP26.11■■□□□ 1.77
GABRD-203ENST00000638604 ABCA10Q8WWZ4 1543 aa26.11■■□□□ 1.77
GABRD-203ENST00000638604 PDS5BQ9NTI5 1447 aa26.1■■□□□ 1.77
GABRD-203ENST00000638604 RAD54L2Q9Y4B4 1467 aa26.07■■□□□ 1.76
GABRD-203ENST00000638604 ARHGAP35Q9NRY4 1499 aa26.03■■□□□ 1.76
GABRD-203ENST00000638604 URB2Q14146 1524 aaKnown RBP26.02■■□□□ 1.76
GABRD-203ENST00000638604 DIEXFQ68CQ4 756 aaKnown RBP26.01■■□□□ 1.75
GABRD-203ENST00000638604 HNRNPUL2Q1KMD3 747 aaKnown RBP25.97■■□□□ 1.75
GABRD-203ENST00000638604 DNAJC5BQ9UF47 199 aa25.97■■□□□ 1.75
GABRD-203ENST00000638604 CUL7Q14999 1698 aa25.95■■□□□ 1.75
GABRD-203ENST00000638604 WDR97A6NE52 1622 aa25.93■■□□□ 1.74
GABRD-203ENST00000638604 KIF21AQ7Z4S6 1674 aa25.92■■□□□ 1.74
GABRD-203ENST00000638604 NEUROD1Q13562 356 aa25.86■■□□□ 1.73
GABRD-203ENST00000638604 ACIN1Q9UKV3 1341 aaKnown RBP25.83■■□□□ 1.73
GABRD-203ENST00000638604 KANK4Q5T7N3 995 aaPredicted RBP25.82■■□□□ 1.72
GABRD-203ENST00000638604 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
GABRD-203ENST00000638604 ZNF316A6NFI3 1004 aaPredicted RBP25.79■■□□□ 1.72
GABRD-203ENST00000638604 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms