RNA–Protein interactions for RNA: ENST00000638395.1

KCNC1-206, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-206ENST00000638395 AEBP2Q6ZN18 517 aaPredicted RBP27.09■■□□□ 1.93
KCNC1-206ENST00000638395 NISCHQ9Y2I1 1504 aa25.82■■□□□ 1.72
KCNC1-206ENST00000638395 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
KCNC1-206ENST00000638395 SENP3Q9H4L4 574 aaPredicted RBP23.1■■□□□ 1.29
KCNC1-206ENST00000638395 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
KCNC1-206ENST00000638395 PHF23Q9BUL5 403 aaPredicted RBP22.81■■□□□ 1.24
KCNC1-206ENST00000638395 ABCC9O60706 1549 aa21.84■■□□□ 1.09
KCNC1-206ENST00000638395 ZCCHC6Q5VYS8 1495 aaKnown RBP21.62■■□□□ 1.05
KCNC1-206ENST00000638395 FOXD1Q16676 465 aa21.52■■□□□ 1.04
KCNC1-206ENST00000638395 DCAF1Q9Y4B6 1507 aa21.46■■□□□ 1.03
KCNC1-206ENST00000638395 MYO15BQ96JP2 1530 aa21.43■■□□□ 1.02
KCNC1-206ENST00000638395 NACADO15069 1562 aa21.4■■□□□ 1.02
KCNC1-206ENST00000638395 RB1CC1Q8TDY2 1594 aa21.33■■□□□ 1.01
KCNC1-206ENST00000638395 DCAF8L2P0C7V8 631 aa21.14■□□□□ 0.97
KCNC1-206ENST00000638395 UNC13AQ9UPW8 1703 aa20.98■□□□□ 0.95
KCNC1-206ENST00000638395 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
KCNC1-206ENST00000638395 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
KCNC1-206ENST00000638395 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.9
KCNC1-206ENST00000638395 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
KCNC1-206ENST00000638395 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
KCNC1-206ENST00000638395 PPP6R1Q9UPN7 881 aa20.18■□□□□ 0.82
KCNC1-206ENST00000638395 PIAS4Q8N2W9 510 aaPredicted RBP20.16■□□□□ 0.82
KCNC1-206ENST00000638395 ADRA2BP18089 450 aa20.13■□□□□ 0.81
KCNC1-206ENST00000638395 MSH5O43196 834 aa20.11■□□□□ 0.81
KCNC1-206ENST00000638395 EIF4G1Q04637 1599 aaKnown RBP20.07■□□□□ 0.8
KCNC1-206ENST00000638395 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
KCNC1-206ENST00000638395 SMARCA4P51532 1647 aa20.02■□□□□ 0.79
KCNC1-206ENST00000638395 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
KCNC1-206ENST00000638395 CC2D2AQ9P2K1 1620 aa19.89■□□□□ 0.77
KCNC1-206ENST00000638395 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
KCNC1-206ENST00000638395 PEG3Q9GZU2 1588 aa19.85■□□□□ 0.77
KCNC1-206ENST00000638395 SMARCA2P51531 1590 aa19.79■□□□□ 0.76
KCNC1-206ENST00000638395 RSF1Q96T23 1441 aaPredicted RBP19.74■□□□□ 0.75
KCNC1-206ENST00000638395 WIZO95785 1651 aa19.73■□□□□ 0.75
KCNC1-206ENST00000638395 ATAD2BQ9ULI0 1458 aa19.72■□□□□ 0.75
KCNC1-206ENST00000638395 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
KCNC1-206ENST00000638395 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
KCNC1-206ENST00000638395 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
KCNC1-206ENST00000638395 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
KCNC1-206ENST00000638395 TOP2AP11388 1531 aaKnown RBP19.56■□□□□ 0.72
KCNC1-206ENST00000638395 POTEDQ86YR6 584 aa19.52■□□□□ 0.72
KCNC1-206ENST00000638395 SUPT5HO00267 1087 aaKnown RBP19.36■□□□□ 0.69
KCNC1-206ENST00000638395 CCDC88BA6NC98 1476 aa19.23■□□□□ 0.67
KCNC1-206ENST00000638395 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
KCNC1-206ENST00000638395 LAMC3Q9Y6N6 1575 aa19.18■□□□□ 0.66
KCNC1-206ENST00000638395 CFTRP13569 1480 aa19.08■□□□□ 0.64
KCNC1-206ENST00000638395 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
KCNC1-206ENST00000638395 NESP48681 1621 aa19.02■□□□□ 0.64
KCNC1-206ENST00000638395 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
KCNC1-206ENST00000638395 PDS5BQ9NTI5 1447 aa18.92■□□□□ 0.62
KCNC1-206ENST00000638395 FANCD2Q9BXW9 1451 aa18.87■□□□□ 0.61
KCNC1-206ENST00000638395 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
KCNC1-206ENST00000638395 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
KCNC1-206ENST00000638395 THOC2Q8NI27 1593 aaKnown RBP18.81■□□□□ 0.6
KCNC1-206ENST00000638395 MRC2Q9UBG0 1479 aa18.74■□□□□ 0.59
KCNC1-206ENST00000638395 WDR62O43379 1518 aa18.73■□□□□ 0.59
KCNC1-206ENST00000638395 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
KCNC1-206ENST00000638395 ABCC8Q09428 1581 aa18.7■□□□□ 0.58
KCNC1-206ENST00000638395 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
KCNC1-206ENST00000638395 URB2Q14146 1524 aaKnown RBP18.66■□□□□ 0.58
KCNC1-206ENST00000638395 TOP2BQ02880 1626 aa18.64■□□□□ 0.57
KCNC1-206ENST00000638395 CUX1P39880 1505 aa18.64■□□□□ 0.57
KCNC1-206ENST00000638395 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
KCNC1-206ENST00000638395 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
KCNC1-206ENST00000638395 SYNJ1O43426 1573 aa18.62■□□□□ 0.57
KCNC1-206ENST00000638395 CUX2O14529 1486 aa18.57■□□□□ 0.56
KCNC1-206ENST00000638395 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
KCNC1-206ENST00000638395 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
KCNC1-206ENST00000638395 POLA1P09884 1462 aaPredicted RBP18.5■□□□□ 0.55
KCNC1-206ENST00000638395 MAPK8IP2Q13387 824 aaPredicted RBP18.47■□□□□ 0.55
KCNC1-206ENST00000638395 TARBP1Q13395 1621 aaKnown RBP18.47■□□□□ 0.55
KCNC1-206ENST00000638395 IFT140Q96RY7 1462 aa18.43■□□□□ 0.54
KCNC1-206ENST00000638395 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
KCNC1-206ENST00000638395 ABCA10Q8WWZ4 1543 aa18.37■□□□□ 0.53
KCNC1-206ENST00000638395 SOGA1O94964 1423 aa18.36■□□□□ 0.53
KCNC1-206ENST00000638395 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
KCNC1-206ENST00000638395 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
KCNC1-206ENST00000638395 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
KCNC1-206ENST00000638395 TRIM41Q8WV44 630 aa18.33■□□□□ 0.52
KCNC1-206ENST00000638395 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
KCNC1-206ENST00000638395 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
KCNC1-206ENST00000638395 ZNF608Q9ULD9 1512 aaPredicted RBP18.25■□□□□ 0.51
KCNC1-206ENST00000638395 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
KCNC1-206ENST00000638395 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
KCNC1-206ENST00000638395 ERICH3Q5RHP9 1530 aa18.19■□□□□ 0.5
KCNC1-206ENST00000638395 CUL7Q14999 1698 aa18.18■□□□□ 0.5
KCNC1-206ENST00000638395 EEA1Q15075 1411 aa18.16■□□□□ 0.5
KCNC1-206ENST00000638395 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.5
KCNC1-206ENST00000638395 GRIN2BQ13224 1484 aa18.16■□□□□ 0.5
KCNC1-206ENST00000638395 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
KCNC1-206ENST00000638395 ADAMTS12P58397 1594 aa18.13■□□□□ 0.49
KCNC1-206ENST00000638395 MAGI1Q96QZ7 1491 aaPredicted RBP18.12■□□□□ 0.49
KCNC1-206ENST00000638395 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
KCNC1-206ENST00000638395 RUSC2Q8N2Y8 1516 aa18.1■□□□□ 0.49
KCNC1-206ENST00000638395 CHD1O14646 1710 aa18.08■□□□□ 0.48
KCNC1-206ENST00000638395 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
KCNC1-206ENST00000638395 IGF1RP08069 1367 aa18.02■□□□□ 0.47
KCNC1-206ENST00000638395 KIF21BO75037 1637 aa18.01■□□□□ 0.47
KCNC1-206ENST00000638395 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
KCNC1-206ENST00000638395 FHAD1B1AJZ9 1412 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms