RNA–Protein interactions for RNA: ENST00000638304.1

GFAP-226, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,139 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-226ENST00000638304 NISCHQ9Y2I1 1504 aa32.05■■■□□ 2.72
GFAP-226ENST00000638304 CCDC180Q9P1Z9 1646 aa28.08■■■□□ 2.09
GFAP-226ENST00000638304 ABCC9O60706 1549 aa27.22■■□□□ 1.95
GFAP-226ENST00000638304 ZCCHC6Q5VYS8 1495 aaKnown RBP26.81■■□□□ 1.88
GFAP-226ENST00000638304 DCAF8L2P0C7V8 631 aa26.78■■□□□ 1.88
GFAP-226ENST00000638304 DCAF1Q9Y4B6 1507 aa26.41■■□□□ 1.82
GFAP-226ENST00000638304 NACADO15069 1562 aa26.31■■□□□ 1.8
GFAP-226ENST00000638304 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
GFAP-226ENST00000638304 RB1CC1Q8TDY2 1594 aa26.22■■□□□ 1.79
GFAP-226ENST00000638304 SHROOM4Q9ULL8 1493 aa25.94■■□□□ 1.74
GFAP-226ENST00000638304 SCRIBQ14160 1630 aa25.9■■□□□ 1.74
GFAP-226ENST00000638304 UNC13AQ9UPW8 1703 aa25.69■■□□□ 1.7
GFAP-226ENST00000638304 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.69
GFAP-226ENST00000638304 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
GFAP-226ENST00000638304 CECR2Q9BXF3 1484 aa25.04■■□□□ 1.6
GFAP-226ENST00000638304 MROH2BQ7Z745 1585 aa24.79■■□□□ 1.56
GFAP-226ENST00000638304 EIF4G1Q04637 1599 aaKnown RBP24.78■■□□□ 1.56
GFAP-226ENST00000638304 BAZ1AQ9NRL2 1556 aaPredicted RBP24.75■■□□□ 1.55
GFAP-226ENST00000638304 SMARCA4P51532 1647 aa24.73■■□□□ 1.55
GFAP-226ENST00000638304 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
GFAP-226ENST00000638304 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
GFAP-226ENST00000638304 DNAJC5BQ9UF47 199 aa24.59■■□□□ 1.53
GFAP-226ENST00000638304 CC2D2AQ9P2K1 1620 aa24.56■■□□□ 1.52
GFAP-226ENST00000638304 WIZO95785 1651 aa24.54■■□□□ 1.52
GFAP-226ENST00000638304 ATAD2BQ9ULI0 1458 aa24.5■■□□□ 1.51
GFAP-226ENST00000638304 PEG3Q9GZU2 1588 aa24.41■■□□□ 1.5
GFAP-226ENST00000638304 SMARCA2P51531 1590 aa24.39■■□□□ 1.49
GFAP-226ENST00000638304 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
GFAP-226ENST00000638304 BAZ1BQ9UIG0 1483 aaKnown RBP24.31■■□□□ 1.48
GFAP-226ENST00000638304 HMGXB3Q12766 1538 aa24.22■■□□□ 1.47
GFAP-226ENST00000638304 TOP2AP11388 1531 aaKnown RBP24.22■■□□□ 1.47
GFAP-226ENST00000638304 CCDC88BA6NC98 1476 aa24.03■■□□□ 1.44
GFAP-226ENST00000638304 NESP48681 1621 aa23.76■■□□□ 1.39
GFAP-226ENST00000638304 CADPSQ9ULU8 1353 aa23.71■■□□□ 1.39
GFAP-226ENST00000638304 CFTRP13569 1480 aa23.67■■□□□ 1.38
GFAP-226ENST00000638304 LAMC3Q9Y6N6 1575 aa23.55■■□□□ 1.36
GFAP-226ENST00000638304 FANCD2Q9BXW9 1451 aa23.45■■□□□ 1.35
GFAP-226ENST00000638304 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
GFAP-226ENST00000638304 ABCC8Q09428 1581 aa23.39■■□□□ 1.33
GFAP-226ENST00000638304 PRDM2Q13029 1718 aa23.38■■□□□ 1.33
GFAP-226ENST00000638304 KIF21AQ7Z4S6 1674 aa23.36■■□□□ 1.33
GFAP-226ENST00000638304 ERCC6Q03468 1493 aa23.34■■□□□ 1.33
GFAP-226ENST00000638304 CEP164Q9UPV0 1460 aa23.33■■□□□ 1.33
GFAP-226ENST00000638304 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
GFAP-226ENST00000638304 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
GFAP-226ENST00000638304 URB2Q14146 1524 aaKnown RBP23.21■■□□□ 1.31
GFAP-226ENST00000638304 CUX1P39880 1505 aa23.2■■□□□ 1.3
GFAP-226ENST00000638304 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
GFAP-226ENST00000638304 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
GFAP-226ENST00000638304 TRIM41Q8WV44 630 aa23.15■■□□□ 1.3
GFAP-226ENST00000638304 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
GFAP-226ENST00000638304 THOC2Q8NI27 1593 aaKnown RBP23.12■■□□□ 1.29
GFAP-226ENST00000638304 DNMBPQ6XZF7 1577 aa23.09■■□□□ 1.29
GFAP-226ENST00000638304 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
GFAP-226ENST00000638304 WDR62O43379 1518 aa23.06■■□□□ 1.28
GFAP-226ENST00000638304 FGD5Q6ZNL6 1462 aa23.03■■□□□ 1.28
GFAP-226ENST00000638304 BIVM-ERCC5R4GMW8 1640 aa23.03■■□□□ 1.28
GFAP-226ENST00000638304 POLA1P09884 1462 aaPredicted RBP23■■□□□ 1.27
GFAP-226ENST00000638304 RAD54L2Q9Y4B4 1467 aa22.97■■□□□ 1.27
GFAP-226ENST00000638304 CUX2O14529 1486 aa22.93■■□□□ 1.26
GFAP-226ENST00000638304 SOGA1O94964 1423 aa22.91■■□□□ 1.26
GFAP-226ENST00000638304 RUSC2Q8N2Y8 1516 aa22.82■■□□□ 1.24
GFAP-226ENST00000638304 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
GFAP-226ENST00000638304 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
GFAP-226ENST00000638304 TDRD9Q8NDG6 1382 aaKnown RBP22.81■■□□□ 1.24
GFAP-226ENST00000638304 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
GFAP-226ENST00000638304 IFT140Q96RY7 1462 aa22.78■■□□□ 1.24
GFAP-226ENST00000638304 ABCA10Q8WWZ4 1543 aa22.77■■□□□ 1.24
GFAP-226ENST00000638304 AQRO60306 1485 aaKnown RBP eCLIP22.74■■□□□ 1.23
GFAP-226ENST00000638304 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
GFAP-226ENST00000638304 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
GFAP-226ENST00000638304 GAPVD1Q14C86 1478 aa22.63■■□□□ 1.21
GFAP-226ENST00000638304 ABCA5Q8WWZ7 1642 aa22.62■■□□□ 1.21
GFAP-226ENST00000638304 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
GFAP-226ENST00000638304 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
GFAP-226ENST00000638304 IGF1RP08069 1367 aa22.59■■□□□ 1.21
GFAP-226ENST00000638304 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
GFAP-226ENST00000638304 EEA1Q15075 1411 aa22.53■■□□□ 1.2
GFAP-226ENST00000638304 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
GFAP-226ENST00000638304 PBRM1Q86U86 1689 aa22.48■■□□□ 1.19
GFAP-226ENST00000638304 SNAPC4Q5SXM2 1469 aa22.48■■□□□ 1.19
GFAP-226ENST00000638304 ERICH3Q5RHP9 1530 aa22.46■■□□□ 1.19
GFAP-226ENST00000638304 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
GFAP-226ENST00000638304 CARMIL1Q5VZK9 1371 aa22.44■■□□□ 1.18
GFAP-226ENST00000638304 PRXQ9BXM0 1461 aa22.41■■□□□ 1.18
GFAP-226ENST00000638304 FBLN2P98095 1184 aa22.4■■□□□ 1.18
GFAP-226ENST00000638304 RAPGEF2Q9Y4G8 1499 aa22.39■■□□□ 1.17
GFAP-226ENST00000638304 ADAMTS12P58397 1594 aa22.37■■□□□ 1.17
GFAP-226ENST00000638304 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
GFAP-226ENST00000638304 FHAD1B1AJZ9 1412 aa22.36■■□□□ 1.17
GFAP-226ENST00000638304 CUL7Q14999 1698 aa22.33■■□□□ 1.17
GFAP-226ENST00000638304 CHMP7Q8WUX9 453 aaPredicted RBP22.33■■□□□ 1.17
GFAP-226ENST00000638304 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
GFAP-226ENST00000638304 KIF21BO75037 1637 aa22.29■■□□□ 1.16
GFAP-226ENST00000638304 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.15
GFAP-226ENST00000638304 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
GFAP-226ENST00000638304 GRIN2AQ12879 1464 aa22.26■■□□□ 1.15
GFAP-226ENST00000638304 CHD1O14646 1710 aa22.21■■□□□ 1.15
GFAP-226ENST00000638304 RANGAP1P46060 587 aaPredicted RBP22.18■■□□□ 1.14
GFAP-226ENST00000638304 CEP170Q5SW79 1584 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms