RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
LINC00598-216ENST00000638163 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
LINC00598-216ENST00000638163 ZCCHC6Q5VYS8 1495 aaKnown RBP19.93■□□□□ 0.78
LINC00598-216ENST00000638163 ABCC9O60706 1549 aa19.92■□□□□ 0.78
LINC00598-216ENST00000638163 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
LINC00598-216ENST00000638163 MYO15BQ96JP2 1530 aa19.71■□□□□ 0.75
LINC00598-216ENST00000638163 NACADO15069 1562 aa19.53■□□□□ 0.72
LINC00598-216ENST00000638163 DCAF8L2P0C7V8 631 aa19.42■□□□□ 0.7
LINC00598-216ENST00000638163 RB1CC1Q8TDY2 1594 aa19.37■□□□□ 0.69
LINC00598-216ENST00000638163 SCRIBQ14160 1630 aa18.96■□□□□ 0.63
LINC00598-216ENST00000638163 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
LINC00598-216ENST00000638163 UNC13AQ9UPW8 1703 aa18.73■□□□□ 0.59
LINC00598-216ENST00000638163 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
LINC00598-216ENST00000638163 BICRAQ9NZM4 1560 aa18.61■□□□□ 0.57
LINC00598-216ENST00000638163 BAZ1AQ9NRL2 1556 aaPredicted RBP18.43■□□□□ 0.54
LINC00598-216ENST00000638163 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
LINC00598-216ENST00000638163 CECR2Q9BXF3 1484 aa18.29■□□□□ 0.52
LINC00598-216ENST00000638163 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
LINC00598-216ENST00000638163 SMARCA4P51532 1647 aa18.27■□□□□ 0.52
LINC00598-216ENST00000638163 MROH2BQ7Z745 1585 aa18.22■□□□□ 0.51
LINC00598-216ENST00000638163 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
LINC00598-216ENST00000638163 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
LINC00598-216ENST00000638163 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
LINC00598-216ENST00000638163 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
LINC00598-216ENST00000638163 WIZO95785 1651 aa18.03■□□□□ 0.48
LINC00598-216ENST00000638163 ATAD2BQ9ULI0 1458 aa18.02■□□□□ 0.48
LINC00598-216ENST00000638163 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.47
LINC00598-216ENST00000638163 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
LINC00598-216ENST00000638163 HMGXB3Q12766 1538 aa17.98■□□□□ 0.47
LINC00598-216ENST00000638163 NCAPD3P42695 1498 aa17.98■□□□□ 0.47
LINC00598-216ENST00000638163 BAZ1BQ9UIG0 1483 aaKnown RBP17.94■□□□□ 0.46
LINC00598-216ENST00000638163 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
LINC00598-216ENST00000638163 CFTRP13569 1480 aa17.5■□□□□ 0.39
LINC00598-216ENST00000638163 CADPSQ9ULU8 1353 aa17.46■□□□□ 0.39
LINC00598-216ENST00000638163 LAMC3Q9Y6N6 1575 aa17.42■□□□□ 0.38
LINC00598-216ENST00000638163 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
LINC00598-216ENST00000638163 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.37
LINC00598-216ENST00000638163 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
LINC00598-216ENST00000638163 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
LINC00598-216ENST00000638163 WRNQ14191 1432 aaPredicted RBP eCLIP17.28■□□□□ 0.36
LINC00598-216ENST00000638163 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
LINC00598-216ENST00000638163 NESP48681 1621 aa17.23■□□□□ 0.35
LINC00598-216ENST00000638163 ABCC8Q09428 1581 aa17.22■□□□□ 0.35
LINC00598-216ENST00000638163 CEP164Q9UPV0 1460 aa17.19■□□□□ 0.34
LINC00598-216ENST00000638163 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
LINC00598-216ENST00000638163 ERCC6Q03468 1493 aa17.17■□□□□ 0.34
LINC00598-216ENST00000638163 BIVM-ERCC5R4GMW8 1640 aa17.16■□□□□ 0.34
LINC00598-216ENST00000638163 EEA1Q15075 1411 aa17.12■□□□□ 0.33
LINC00598-216ENST00000638163 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
LINC00598-216ENST00000638163 DNMBPQ6XZF7 1577 aa17.1■□□□□ 0.33
LINC00598-216ENST00000638163 CUX1P39880 1505 aa17.08■□□□□ 0.32
LINC00598-216ENST00000638163 MRC2Q9UBG0 1479 aa17.03■□□□□ 0.32
LINC00598-216ENST00000638163 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
LINC00598-216ENST00000638163 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
LINC00598-216ENST00000638163 CUX2O14529 1486 aa16.99■□□□□ 0.31
LINC00598-216ENST00000638163 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.31
LINC00598-216ENST00000638163 WDR62O43379 1518 aa16.96■□□□□ 0.3
LINC00598-216ENST00000638163 FGD5Q6ZNL6 1462 aa16.95■□□□□ 0.3
LINC00598-216ENST00000638163 THOC2Q8NI27 1593 aaKnown RBP16.94■□□□□ 0.3
LINC00598-216ENST00000638163 KIF27Q86VH2 1401 aa16.92■□□□□ 0.3
LINC00598-216ENST00000638163 POLA1P09884 1462 aaPredicted RBP16.91■□□□□ 0.3
LINC00598-216ENST00000638163 ABCA10Q8WWZ4 1543 aa16.89■□□□□ 0.29
LINC00598-216ENST00000638163 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
LINC00598-216ENST00000638163 SOGA1O94964 1423 aa16.87■□□□□ 0.29
LINC00598-216ENST00000638163 IFT140Q96RY7 1462 aa16.83■□□□□ 0.28
LINC00598-216ENST00000638163 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
LINC00598-216ENST00000638163 KIF21BO75037 1637 aa16.78■□□□□ 0.28
LINC00598-216ENST00000638163 TARBP1Q13395 1621 aaKnown RBP16.77■□□□□ 0.27
LINC00598-216ENST00000638163 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
LINC00598-216ENST00000638163 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
LINC00598-216ENST00000638163 RAD54L2Q9Y4B4 1467 aa16.73■□□□□ 0.27
LINC00598-216ENST00000638163 ABCA5Q8WWZ7 1642 aa16.72■□□□□ 0.27
LINC00598-216ENST00000638163 FAM9AQ8IZU1 332 aaPredicted RBP16.72■□□□□ 0.27
LINC00598-216ENST00000638163 RUSC2Q8N2Y8 1516 aa16.71■□□□□ 0.27
LINC00598-216ENST00000638163 PRXQ9BXM0 1461 aa16.71■□□□□ 0.27
LINC00598-216ENST00000638163 CUL7Q14999 1698 aa16.7■□□□□ 0.26
LINC00598-216ENST00000638163 GAPVD1Q14C86 1478 aa16.7■□□□□ 0.26
LINC00598-216ENST00000638163 IGF1RP08069 1367 aa16.68■□□□□ 0.26
LINC00598-216ENST00000638163 GRIN2BQ13224 1484 aa16.65■□□□□ 0.26
LINC00598-216ENST00000638163 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.25
LINC00598-216ENST00000638163 RAPGEF2Q9Y4G8 1499 aa16.63■□□□□ 0.25
LINC00598-216ENST00000638163 CARMIL1Q5VZK9 1371 aa16.63■□□□□ 0.25
LINC00598-216ENST00000638163 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
LINC00598-216ENST00000638163 PBRM1Q86U86 1689 aa16.57■□□□□ 0.24
LINC00598-216ENST00000638163 EIF4G3O43432 1585 aaKnown RBP16.57■□□□□ 0.24
LINC00598-216ENST00000638163 MAGI1Q96QZ7 1491 aaPredicted RBP16.57■□□□□ 0.24
LINC00598-216ENST00000638163 FHAD1B1AJZ9 1412 aa16.57■□□□□ 0.24
LINC00598-216ENST00000638163 LOC105371045A0A1W2PR82 267 aa16.55■□□□□ 0.24
LINC00598-216ENST00000638163 UBTFP17480 764 aaKnown RBP16.54■□□□□ 0.24
LINC00598-216ENST00000638163 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC00598-216ENST00000638163 ZNF608Q9ULD9 1512 aaPredicted RBP16.53■□□□□ 0.24
LINC00598-216ENST00000638163 ADAMTS12P58397 1594 aa16.52■□□□□ 0.24
LINC00598-216ENST00000638163 DNAJC5Q9H3Z4 198 aa16.52■□□□□ 0.24
LINC00598-216ENST00000638163 SYNJ2O15056 1496 aa16.47■□□□□ 0.23
LINC00598-216ENST00000638163 CEP162Q5TB80 1403 aa16.46■□□□□ 0.23
LINC00598-216ENST00000638163 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
LINC00598-216ENST00000638163 CLIP1P30622 1438 aa16.41■□□□□ 0.22
LINC00598-216ENST00000638163 GRIN2AQ12879 1464 aa16.41■□□□□ 0.22
LINC00598-216ENST00000638163 CTTNBP2Q8WZ74 1663 aa16.39■□□□□ 0.21
LINC00598-216ENST00000638163 EFCAB5A4FU69 1503 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms