RNA–Protein interactions for RNA: ENST00000638149.1

GABRB3-226, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-226ENST00000638149 NISCHQ9Y2I1 1504 aa11.53□□□□□ -0.56
GABRB3-226ENST00000638149 ABCC9O60706 1549 aa10.75□□□□□ -0.69
GABRB3-226ENST00000638149 CCDC180Q9P1Z9 1646 aa10.42□□□□□ -0.74
GABRB3-226ENST00000638149 DNAJC5BQ9UF47 199 aa10.19□□□□□ -0.78
GABRB3-226ENST00000638149 DCAF8L2P0C7V8 631 aa10.09□□□□□ -0.79
GABRB3-226ENST00000638149 RB1CC1Q8TDY2 1594 aa10.09□□□□□ -0.79
GABRB3-226ENST00000638149 PABPN1Q86U42 306 aaKnown RBP eCLIP10.01□□□□□ -0.81
GABRB3-226ENST00000638149 NACADO15069 1562 aa9.92□□□□□ -0.82
GABRB3-226ENST00000638149 UNC13AQ9UPW8 1703 aa9.79□□□□□ -0.84
GABRB3-226ENST00000638149 BICRAQ9NZM4 1560 aa9.71□□□□□ -0.86
GABRB3-226ENST00000638149 CECR2Q9BXF3 1484 aa9.68□□□□□ -0.86
GABRB3-226ENST00000638149 CC2D2AQ9P2K1 1620 aa9.64□□□□□ -0.87
GABRB3-226ENST00000638149 MYO15BQ96JP2 1530 aa9.61□□□□□ -0.87
GABRB3-226ENST00000638149 SCRIBQ14160 1630 aa9.59□□□□□ -0.87
GABRB3-226ENST00000638149 EIF4G1Q04637 1599 aaKnown RBP9.55□□□□□ -0.88
GABRB3-226ENST00000638149 SHROOM4Q9ULL8 1493 aa9.55□□□□□ -0.88
GABRB3-226ENST00000638149 DNAJC5Q9H3Z4 198 aa9.55□□□□□ -0.88
GABRB3-226ENST00000638149 ZCCHC6Q5VYS8 1495 aaKnown RBP9.48□□□□□ -0.89
GABRB3-226ENST00000638149 DCAF1Q9Y4B6 1507 aa9.44□□□□□ -0.9
GABRB3-226ENST00000638149 ERCC6Q03468 1493 aa9.35□□□□□ -0.91
GABRB3-226ENST00000638149 CUX2O14529 1486 aa9.29□□□□□ -0.92
GABRB3-226ENST00000638149 TRIM41Q8WV44 630 aa9.22□□□□□ -0.93
GABRB3-226ENST00000638149 NCAPD3P42695 1498 aa9.14□□□□□ -0.95
GABRB3-226ENST00000638149 NESP48681 1621 aa9.13□□□□□ -0.95
GABRB3-226ENST00000638149 ATAD2BQ9ULI0 1458 aa9.11□□□□□ -0.95
GABRB3-226ENST00000638149 SMARCA2P51531 1590 aa9.1□□□□□ -0.95
GABRB3-226ENST00000638149 BAZ1BQ9UIG0 1483 aaKnown RBP9.08□□□□□ -0.96
GABRB3-226ENST00000638149 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
GABRB3-226ENST00000638149 SMARCA4P51532 1647 aa9.05□□□□□ -0.96
GABRB3-226ENST00000638149 THOC2Q8NI27 1593 aaKnown RBP9.03□□□□□ -0.96
GABRB3-226ENST00000638149 PDS5BQ9NTI5 1447 aa9.02□□□□□ -0.97
GABRB3-226ENST00000638149 LAMC3Q9Y6N6 1575 aa9.01□□□□□ -0.97
GABRB3-226ENST00000638149 KIF21AQ7Z4S6 1674 aa9□□□□□ -0.97
GABRB3-226ENST00000638149 BAZ1AQ9NRL2 1556 aaPredicted RBP8.99□□□□□ -0.97
GABRB3-226ENST00000638149 MRC2Q9UBG0 1479 aa8.93□□□□□ -0.98
GABRB3-226ENST00000638149 OSCARQ8IYS5 282 aa8.91□□□□□ -0.98
GABRB3-226ENST00000638149 CADPSQ9ULU8 1353 aa8.9□□□□□ -0.98
GABRB3-226ENST00000638149 MROH2BQ7Z745 1585 aa8.89□□□□□ -0.99
GABRB3-226ENST00000638149 PEG3Q9GZU2 1588 aa8.88□□□□□ -0.99
GABRB3-226ENST00000638149 CEP164Q9UPV0 1460 aa8.88□□□□□ -0.99
GABRB3-226ENST00000638149 WDR62O43379 1518 aa8.86□□□□□ -0.99
GABRB3-226ENST00000638149 FANCD2Q9BXW9 1451 aa8.83□□□□□ -1
GABRB3-226ENST00000638149 TRHP20396 242 aaPredicted RBP8.82□□□□□ -1
GABRB3-226ENST00000638149 WIZO95785 1651 aa8.8□□□□□ -1
GABRB3-226ENST00000638149 CYB5RLQ6IPT4 315 aa8.76□□□□□ -1.01
GABRB3-226ENST00000638149 AEBP2Q6ZN18 517 aaPredicted RBP8.76□□□□□ -1.01
GABRB3-226ENST00000638149 RIMBP3CA6NJZ7 1639 aa8.76□□□□□ -1.01
GABRB3-226ENST00000638149 RIMBP3BA6NNM3 1639 aa8.76□□□□□ -1.01
GABRB3-226ENST00000638149 RIMBP3Q9UFD9 1639 aa8.76□□□□□ -1.01
GABRB3-226ENST00000638149 FBLN2P98095 1184 aa8.74□□□□□ -1.01
GABRB3-226ENST00000638149 URB2Q14146 1524 aaKnown RBP8.72□□□□□ -1.01
GABRB3-226ENST00000638149 CFTRP13569 1480 aa8.71□□□□□ -1.01
GABRB3-226ENST00000638149 ARHGEF11O15085 1522 aa8.71□□□□□ -1.01
GABRB3-226ENST00000638149 IFT140Q96RY7 1462 aa8.68□□□□□ -1.02
GABRB3-226ENST00000638149 ZNF608Q9ULD9 1512 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-226ENST00000638149 TOP2AP11388 1531 aaKnown RBP8.65□□□□□ -1.02
GABRB3-226ENST00000638149 EIF4G3O43432 1585 aaKnown RBP8.62□□□□□ -1.03
GABRB3-226ENST00000638149 PRDM2Q13029 1718 aa8.62□□□□□ -1.03
GABRB3-226ENST00000638149 RSF1Q96T23 1441 aaPredicted RBP8.62□□□□□ -1.03
GABRB3-226ENST00000638149 TOPBP1Q92547 1522 aa8.61□□□□□ -1.03
GABRB3-226ENST00000638149 CHD1O14646 1710 aa8.6□□□□□ -1.03
GABRB3-226ENST00000638149 AQRO60306 1485 aaKnown RBP eCLIP8.6□□□□□ -1.03
GABRB3-226ENST00000638149 ARAP1Q96P48 1450 aa8.59□□□□□ -1.03
GABRB3-226ENST00000638149 ABCC8Q09428 1581 aa8.59□□□□□ -1.03
GABRB3-226ENST00000638149 CCDC88BA6NC98 1476 aa8.57□□□□□ -1.04
GABRB3-226ENST00000638149 CHMP7Q8WUX9 453 aaPredicted RBP8.57□□□□□ -1.04
GABRB3-226ENST00000638149 DNMBPQ6XZF7 1577 aa8.56□□□□□ -1.04
GABRB3-226ENST00000638149 TDRD9Q8NDG6 1382 aaKnown RBP8.53□□□□□ -1.04
GABRB3-226ENST00000638149 SOGA1O94964 1423 aa8.52□□□□□ -1.05
GABRB3-226ENST00000638149 RAD54L2Q9Y4B4 1467 aa8.51□□□□□ -1.05
GABRB3-226ENST00000638149 POLA1P09884 1462 aaPredicted RBP8.51□□□□□ -1.05
GABRB3-226ENST00000638149 SNAPC4Q5SXM2 1469 aa8.51□□□□□ -1.05
GABRB3-226ENST00000638149 TARBP1Q13395 1621 aaKnown RBP8.51□□□□□ -1.05
GABRB3-226ENST00000638149 SYNJ1O43426 1573 aa8.5□□□□□ -1.05
GABRB3-226ENST00000638149 GRIN2BQ13224 1484 aa8.45□□□□□ -1.06
GABRB3-226ENST00000638149 GAPVD1Q14C86 1478 aa8.45□□□□□ -1.06
GABRB3-226ENST00000638149 FGD5Q6ZNL6 1462 aa8.45□□□□□ -1.06
GABRB3-226ENST00000638149 CLASP1Q7Z460 1538 aa8.44□□□□□ -1.06
GABRB3-226ENST00000638149 MAGI1Q96QZ7 1491 aaPredicted RBP8.44□□□□□ -1.06
GABRB3-226ENST00000638149 SYNJ2O15056 1496 aa8.43□□□□□ -1.06
GABRB3-226ENST00000638149 WDR97A6NE52 1622 aa8.4□□□□□ -1.06
GABRB3-226ENST00000638149 PBRM1Q86U86 1689 aa8.39□□□□□ -1.07
GABRB3-226ENST00000638149 NPM1P06748 294 aaKnown RBP eCLIP8.37□□□□□ -1.07
GABRB3-226ENST00000638149 CUX1P39880 1505 aa8.36□□□□□ -1.07
GABRB3-226ENST00000638149 FAM69CQ0P6D2 419 aa8.33□□□□□ -1.08
GABRB3-226ENST00000638149 ERCC6L2Q5T890 1561 aa8.33□□□□□ -1.08
GABRB3-226ENST00000638149 GRIN2AQ12879 1464 aa8.32□□□□□ -1.08
GABRB3-226ENST00000638149 CEP170Q5SW79 1584 aa8.31□□□□□ -1.08
GABRB3-226ENST00000638149 TTBK1Q5TCY1 1321 aaPredicted RBP8.29□□□□□ -1.08
GABRB3-226ENST00000638149 ABCA10Q8WWZ4 1543 aa8.29□□□□□ -1.08
GABRB3-226ENST00000638149 ABCA5Q8WWZ7 1642 aa8.29□□□□□ -1.08
GABRB3-226ENST00000638149 WRNQ14191 1432 aaPredicted RBP eCLIP8.29□□□□□ -1.08
GABRB3-226ENST00000638149 PRG4Q92954 1404 aaPredicted RBP8.29□□□□□ -1.08
GABRB3-226ENST00000638149 SUPT5HO00267 1087 aaKnown RBP8.28□□□□□ -1.08
GABRB3-226ENST00000638149 ADAMTS12P58397 1594 aa8.27□□□□□ -1.09
GABRB3-226ENST00000638149 ILDR1Q86SU0 546 aaPredicted RBP8.27□□□□□ -1.09
GABRB3-226ENST00000638149 KIF13AQ9H1H9 1805 aa8.26□□□□□ -1.09
GABRB3-226ENST00000638149 JPH4Q96JJ6 628 aa8.26□□□□□ -1.09
GABRB3-226ENST00000638149 FHAD1B1AJZ9 1412 aa8.26□□□□□ -1.09
GABRB3-226ENST00000638149 NUP160Q12769 1436 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms