RNA–Protein interactions for RNA: ENST00000637924.1

LINC00604-202, long intergenic non-protein coding RNA 604, humanhuman

TSL 5 BASIC

Gene LINC00604, Length 684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00604-202ENST00000637924 NISCHQ9Y2I1 1504 aa21.27■■□□□ 1
LINC00604-202ENST00000637924 ABCC9O60706 1549 aa19.12■□□□□ 0.65
LINC00604-202ENST00000637924 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.61
LINC00604-202ENST00000637924 DCAF8L2P0C7V8 631 aa18.3■□□□□ 0.52
LINC00604-202ENST00000637924 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
LINC00604-202ENST00000637924 NACADO15069 1562 aa17.95■□□□□ 0.46
LINC00604-202ENST00000637924 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
LINC00604-202ENST00000637924 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
LINC00604-202ENST00000637924 MYO15BQ96JP2 1530 aa17.63■□□□□ 0.41
LINC00604-202ENST00000637924 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
LINC00604-202ENST00000637924 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
LINC00604-202ENST00000637924 BICRAQ9NZM4 1560 aa17.51■□□□□ 0.39
LINC00604-202ENST00000637924 DCAF1Q9Y4B6 1507 aa17.46■□□□□ 0.39
LINC00604-202ENST00000637924 SCRIBQ14160 1630 aa17.41■□□□□ 0.38
LINC00604-202ENST00000637924 SHROOM4Q9ULL8 1493 aa17.19■□□□□ 0.34
LINC00604-202ENST00000637924 CECR2Q9BXF3 1484 aa17.18■□□□□ 0.34
LINC00604-202ENST00000637924 CC2D2AQ9P2K1 1620 aa17.16■□□□□ 0.34
LINC00604-202ENST00000637924 EIF4G1Q04637 1599 aaKnown RBP17.12■□□□□ 0.33
LINC00604-202ENST00000637924 NCAPD3P42695 1498 aa16.61■□□□□ 0.25
LINC00604-202ENST00000637924 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
LINC00604-202ENST00000637924 SMARCA4P51532 1647 aa16.53■□□□□ 0.24
LINC00604-202ENST00000637924 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
LINC00604-202ENST00000637924 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
LINC00604-202ENST00000637924 BAZ1AQ9NRL2 1556 aaPredicted RBP16.48■□□□□ 0.23
LINC00604-202ENST00000637924 BAZ1BQ9UIG0 1483 aaKnown RBP16.47■□□□□ 0.23
LINC00604-202ENST00000637924 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
LINC00604-202ENST00000637924 NESP48681 1621 aa16.42■□□□□ 0.22
LINC00604-202ENST00000637924 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
LINC00604-202ENST00000637924 DNAJC5Q9H3Z4 198 aa16.38■□□□□ 0.21
LINC00604-202ENST00000637924 CUX2O14529 1486 aa16.32■□□□□ 0.2
LINC00604-202ENST00000637924 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
LINC00604-202ENST00000637924 WIZO95785 1651 aa16.21■□□□□ 0.19
LINC00604-202ENST00000637924 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
LINC00604-202ENST00000637924 CADPSQ9ULU8 1353 aa16.19■□□□□ 0.18
LINC00604-202ENST00000637924 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
LINC00604-202ENST00000637924 RSF1Q96T23 1441 aaPredicted RBP16.13■□□□□ 0.17
LINC00604-202ENST00000637924 THOC2Q8NI27 1593 aaKnown RBP16.08■□□□□ 0.16
LINC00604-202ENST00000637924 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
LINC00604-202ENST00000637924 MRC2Q9UBG0 1479 aa16.02■□□□□ 0.15
LINC00604-202ENST00000637924 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
LINC00604-202ENST00000637924 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
LINC00604-202ENST00000637924 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
LINC00604-202ENST00000637924 CFTRP13569 1480 aa15.95■□□□□ 0.14
LINC00604-202ENST00000637924 WDR62O43379 1518 aa15.9■□□□□ 0.14
LINC00604-202ENST00000637924 CCDC88BA6NC98 1476 aa15.89■□□□□ 0.13
LINC00604-202ENST00000637924 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
LINC00604-202ENST00000637924 URB2Q14146 1524 aaKnown RBP15.83■□□□□ 0.12
LINC00604-202ENST00000637924 OSCARQ8IYS5 282 aa15.77■□□□□ 0.12
LINC00604-202ENST00000637924 SUPT5HO00267 1087 aaKnown RBP15.73■□□□□ 0.11
LINC00604-202ENST00000637924 TOPBP1Q92547 1522 aa15.67■□□□□ 0.1
LINC00604-202ENST00000637924 ZNF608Q9ULD9 1512 aaPredicted RBP15.67■□□□□ 0.1
LINC00604-202ENST00000637924 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
LINC00604-202ENST00000637924 FBLN2P98095 1184 aa15.62■□□□□ 0.09
LINC00604-202ENST00000637924 ABCC8Q09428 1581 aa15.6■□□□□ 0.09
LINC00604-202ENST00000637924 PRDM2Q13029 1718 aa15.6■□□□□ 0.09
LINC00604-202ENST00000637924 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC00604-202ENST00000637924 DNMBPQ6XZF7 1577 aa15.56■□□□□ 0.08
LINC00604-202ENST00000637924 RAD54L2Q9Y4B4 1467 aa15.54■□□□□ 0.08
LINC00604-202ENST00000637924 TDRD9Q8NDG6 1382 aaKnown RBP15.53■□□□□ 0.08
LINC00604-202ENST00000637924 SOGA1O94964 1423 aa15.52■□□□□ 0.08
LINC00604-202ENST00000637924 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.07
LINC00604-202ENST00000637924 EIF4G3O43432 1585 aaKnown RBP15.47■□□□□ 0.07
LINC00604-202ENST00000637924 CYB5RLQ6IPT4 315 aa15.47■□□□□ 0.07
LINC00604-202ENST00000637924 CHMP7Q8WUX9 453 aaPredicted RBP15.45■□□□□ 0.06
LINC00604-202ENST00000637924 FGD5Q6ZNL6 1462 aa15.45■□□□□ 0.06
LINC00604-202ENST00000637924 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
LINC00604-202ENST00000637924 CUX1P39880 1505 aa15.41■□□□□ 0.06
LINC00604-202ENST00000637924 RIMBP3CA6NJZ7 1639 aa15.39■□□□□ 0.05
LINC00604-202ENST00000637924 RIMBP3BA6NNM3 1639 aa15.39■□□□□ 0.05
LINC00604-202ENST00000637924 RIMBP3Q9UFD9 1639 aa15.39■□□□□ 0.05
LINC00604-202ENST00000637924 ARHGEF11O15085 1522 aa15.38■□□□□ 0.05
LINC00604-202ENST00000637924 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
LINC00604-202ENST00000637924 CHD1O14646 1710 aa15.32■□□□□ 0.04
LINC00604-202ENST00000637924 TRHP20396 242 aaPredicted RBP15.32■□□□□ 0.04
LINC00604-202ENST00000637924 GRIN2BQ13224 1484 aa15.32■□□□□ 0.04
LINC00604-202ENST00000637924 GAPVD1Q14C86 1478 aa15.28■□□□□ 0.04
LINC00604-202ENST00000637924 MAGI1Q96QZ7 1491 aaPredicted RBP15.26■□□□□ 0.03
LINC00604-202ENST00000637924 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
LINC00604-202ENST00000637924 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
LINC00604-202ENST00000637924 ARAP1Q96P48 1450 aa15.24■□□□□ 0.03
LINC00604-202ENST00000637924 ABCA10Q8WWZ4 1543 aa15.22■□□□□ 0.03
LINC00604-202ENST00000637924 WDR97A6NE52 1622 aa15.21■□□□□ 0.02
LINC00604-202ENST00000637924 SYNJ1O43426 1573 aa15.2■□□□□ 0.02
LINC00604-202ENST00000637924 CLASP1Q7Z460 1538 aa15.16■□□□□ 0.02
LINC00604-202ENST00000637924 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
LINC00604-202ENST00000637924 TOP2BQ02880 1626 aa15.13■□□□□ 0.01
LINC00604-202ENST00000637924 ABCA5Q8WWZ7 1642 aa15.13■□□□□ 0.01
LINC00604-202ENST00000637924 GRIN2AQ12879 1464 aa15.1■□□□□ 0.01
LINC00604-202ENST00000637924 FHAD1B1AJZ9 1412 aa15.09■□□□□ 0.01
LINC00604-202ENST00000637924 BIVM-ERCC5R4GMW8 1640 aa15.08■□□□□ 0
LINC00604-202ENST00000637924 ADAMTS12P58397 1594 aa15.03■□□□□ -0
LINC00604-202ENST00000637924 JPH4Q96JJ6 628 aa15.03■□□□□ -0
LINC00604-202ENST00000637924 NUP160Q12769 1436 aa15.02■□□□□ -0
LINC00604-202ENST00000637924 CEP170Q5SW79 1584 aa15.02□□□□□ -0.01
LINC00604-202ENST00000637924 ERCC6L2Q5T890 1561 aa15.02□□□□□ -0.01
LINC00604-202ENST00000637924 ERICH3Q5RHP9 1530 aa15.01□□□□□ -0.01
LINC00604-202ENST00000637924 PRG4Q92954 1404 aaPredicted RBP14.99□□□□□ -0.01
LINC00604-202ENST00000637924 TTBK1Q5TCY1 1321 aaPredicted RBP14.98□□□□□ -0.01
LINC00604-202ENST00000637924 IGF1RP08069 1367 aa14.97□□□□□ -0.01
LINC00604-202ENST00000637924 KIF27Q86VH2 1401 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms