RNA–Protein interactions for RNA: ENST00000637892.1

EFHC1-237, Transcript of EF-hand domain containing 1, humanhuman

TSL 5

Gene EFHC1, Length 2,635 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-237ENST00000637892 NISCHQ9Y2I1 1504 aa28.37■■■□□ 2.13
EFHC1-237ENST00000637892 CCDC180Q9P1Z9 1646 aa24.26■■□□□ 1.47
EFHC1-237ENST00000637892 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
EFHC1-237ENST00000637892 ZCCHC6Q5VYS8 1495 aaKnown RBP23.92■■□□□ 1.42
EFHC1-237ENST00000637892 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
EFHC1-237ENST00000637892 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.33
EFHC1-237ENST00000637892 DCAF1Q9Y4B6 1507 aa23.26■■□□□ 1.31
EFHC1-237ENST00000637892 ABCC9O60706 1549 aa22.88■■□□□ 1.25
EFHC1-237ENST00000637892 MYO15BQ96JP2 1530 aa22.73■■□□□ 1.23
EFHC1-237ENST00000637892 SCRIBQ14160 1630 aa22.72■■□□□ 1.23
EFHC1-237ENST00000637892 NACADO15069 1562 aa22.55■■□□□ 1.2
EFHC1-237ENST00000637892 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
EFHC1-237ENST00000637892 RSF1Q96T23 1441 aaPredicted RBP22.32■■□□□ 1.16
EFHC1-237ENST00000637892 RB1CC1Q8TDY2 1594 aa22.27■■□□□ 1.16
EFHC1-237ENST00000637892 CECR2Q9BXF3 1484 aa22.17■■□□□ 1.14
EFHC1-237ENST00000637892 MROH2BQ7Z745 1585 aa22.04■■□□□ 1.12
EFHC1-237ENST00000637892 WIZO95785 1651 aa21.89■■□□□ 1.09
EFHC1-237ENST00000637892 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
EFHC1-237ENST00000637892 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.08
EFHC1-237ENST00000637892 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
EFHC1-237ENST00000637892 LOC105371045A0A1W2PR82 267 aa21.8■■□□□ 1.08
EFHC1-237ENST00000637892 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
EFHC1-237ENST00000637892 SMARCA4P51532 1647 aa21.68■■□□□ 1.06
EFHC1-237ENST00000637892 BICRAQ9NZM4 1560 aa21.66■■□□□ 1.06
EFHC1-237ENST00000637892 FAM9AQ8IZU1 332 aaPredicted RBP21.58■■□□□ 1.05
EFHC1-237ENST00000637892 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
EFHC1-237ENST00000637892 CCDC88BA6NC98 1476 aa21.46■■□□□ 1.03
EFHC1-237ENST00000637892 EHMT2Q96KQ7 1210 aa21.42■■□□□ 1.02
EFHC1-237ENST00000637892 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
EFHC1-237ENST00000637892 PCGF6Q9BYE7 350 aa21.4■■□□□ 1.02
EFHC1-237ENST00000637892 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
EFHC1-237ENST00000637892 ABCC8Q09428 1581 aa21.29■■□□□ 1
EFHC1-237ENST00000637892 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
EFHC1-237ENST00000637892 ATAD2BQ9ULI0 1458 aa21.24■□□□□ 0.99
EFHC1-237ENST00000637892 BAZ1BQ9UIG0 1483 aaKnown RBP21.17■□□□□ 0.98
EFHC1-237ENST00000637892 HRCP23327 699 aa21.08■□□□□ 0.97
EFHC1-237ENST00000637892 TRIM26Q12899 539 aaPredicted RBP21.06■□□□□ 0.96
EFHC1-237ENST00000637892 SOGA1O94964 1423 aa21.03■□□□□ 0.96
EFHC1-237ENST00000637892 WRNQ14191 1432 aaPredicted RBP eCLIP20.99■□□□□ 0.95
EFHC1-237ENST00000637892 RUSC2Q8N2Y8 1516 aa20.93■□□□□ 0.94
EFHC1-237ENST00000637892 NCAPD3P42695 1498 aa20.88■□□□□ 0.93
EFHC1-237ENST00000637892 CSRNP3Q8WYN3 585 aa20.88■□□□□ 0.93
EFHC1-237ENST00000637892 SYNJ1O43426 1573 aa20.87■□□□□ 0.93
EFHC1-237ENST00000637892 PPARGC1BQ86YN6 1023 aaKnown RBP20.86■□□□□ 0.93
EFHC1-237ENST00000637892 HMGXB3Q12766 1538 aa20.83■□□□□ 0.93
EFHC1-237ENST00000637892 EEA1Q15075 1411 aa20.83■□□□□ 0.92
EFHC1-237ENST00000637892 UBTFP17480 764 aaKnown RBP20.79■□□□□ 0.92
EFHC1-237ENST00000637892 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
EFHC1-237ENST00000637892 TNIKQ9UKE5 1360 aa20.72■□□□□ 0.91
EFHC1-237ENST00000637892 GOLGA3Q08378 1498 aa20.68■□□□□ 0.9
EFHC1-237ENST00000637892 TOP2BQ02880 1626 aa20.64■□□□□ 0.89
EFHC1-237ENST00000637892 TTBK1Q5TCY1 1321 aaPredicted RBP20.63■□□□□ 0.89
EFHC1-237ENST00000637892 CFTRP13569 1480 aa20.61■□□□□ 0.89
EFHC1-237ENST00000637892 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
EFHC1-237ENST00000637892 CC2D2AQ9P2K1 1620 aa20.56■□□□□ 0.88
EFHC1-237ENST00000637892 BIVM-ERCC5R4GMW8 1640 aa20.55■□□□□ 0.88
EFHC1-237ENST00000637892 CUX1P39880 1505 aa20.54■□□□□ 0.88
EFHC1-237ENST00000637892 KIF21BO75037 1637 aa20.54■□□□□ 0.88
EFHC1-237ENST00000637892 RAPGEF2Q9Y4G8 1499 aa20.53■□□□□ 0.88
EFHC1-237ENST00000637892 RANGAP1P46060 587 aaPredicted RBP20.51■□□□□ 0.87
EFHC1-237ENST00000637892 CADPSQ9ULU8 1353 aa20.47■□□□□ 0.87
EFHC1-237ENST00000637892 CLIP1P30622 1438 aa20.45■□□□□ 0.86
EFHC1-237ENST00000637892 ZEB1P37275 1124 aaPredicted RBP20.4■□□□□ 0.86
EFHC1-237ENST00000637892 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
EFHC1-237ENST00000637892 PRXQ9BXM0 1461 aa20.35■□□□□ 0.85
EFHC1-237ENST00000637892 PRDM2Q13029 1718 aa20.35■□□□□ 0.85
EFHC1-237ENST00000637892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.85
EFHC1-237ENST00000637892 VPS8Q8N3P4 1428 aa20.3■□□□□ 0.84
EFHC1-237ENST00000637892 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
EFHC1-237ENST00000637892 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.84
EFHC1-237ENST00000637892 CUX2O14529 1486 aa20.27■□□□□ 0.84
EFHC1-237ENST00000637892 NESP48681 1621 aa20.26■□□□□ 0.83
EFHC1-237ENST00000637892 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
EFHC1-237ENST00000637892 CCER1Q8TC90 406 aaPredicted RBP20.25■□□□□ 0.83
EFHC1-237ENST00000637892 APLP2Q06481 763 aa20.24■□□□□ 0.83
EFHC1-237ENST00000637892 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
EFHC1-237ENST00000637892 IGF1RP08069 1367 aa20.19■□□□□ 0.82
EFHC1-237ENST00000637892 ARAP1Q96P48 1450 aa20.14■□□□□ 0.81
EFHC1-237ENST00000637892 CARMIL1Q5VZK9 1371 aa20.11■□□□□ 0.81
EFHC1-237ENST00000637892 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
EFHC1-237ENST00000637892 HNRNPUL2Q1KMD3 747 aaKnown RBP20.09■□□□□ 0.81
EFHC1-237ENST00000637892 TOPBP1Q92547 1522 aa20.09■□□□□ 0.81
EFHC1-237ENST00000637892 DNMBPQ6XZF7 1577 aa20.09■□□□□ 0.81
EFHC1-237ENST00000637892 POLA1P09884 1462 aaPredicted RBP20.07■□□□□ 0.8
EFHC1-237ENST00000637892 ARHGAP35Q9NRY4 1499 aa20.04■□□□□ 0.8
EFHC1-237ENST00000637892 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
EFHC1-237ENST00000637892 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.79
EFHC1-237ENST00000637892 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
EFHC1-237ENST00000637892 ABCA10Q8WWZ4 1543 aa19.99■□□□□ 0.79
EFHC1-237ENST00000637892 PDS5BQ9NTI5 1447 aa19.96■□□□□ 0.79
EFHC1-237ENST00000637892 P3H3Q8IVL6 736 aa19.91■□□□□ 0.78
EFHC1-237ENST00000637892 TDRD9Q8NDG6 1382 aaKnown RBP19.91■□□□□ 0.78
EFHC1-237ENST00000637892 KIF21AQ7Z4S6 1674 aa19.86■□□□□ 0.77
EFHC1-237ENST00000637892 ATP1B4Q9UN42 357 aaPredicted RBP19.81■□□□□ 0.76
EFHC1-237ENST00000637892 CUL7Q14999 1698 aa19.8■□□□□ 0.76
EFHC1-237ENST00000637892 WDR97A6NE52 1622 aa19.79■□□□□ 0.76
EFHC1-237ENST00000637892 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
EFHC1-237ENST00000637892 FHOD3Q2V2M9 1422 aa19.78■□□□□ 0.76
EFHC1-237ENST00000637892 ABCA5Q8WWZ7 1642 aa19.76■□□□□ 0.75
EFHC1-237ENST00000637892 RRBP1Q9P2E9 1410 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms