RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 NISCHQ9Y2I1 1504 aa14.1□□□□□ -0.15
CACNA1D-227ENST00000637844 CCDC180Q9P1Z9 1646 aa12.37□□□□□ -0.43
CACNA1D-227ENST00000637844 ZCCHC6Q5VYS8 1495 aaKnown RBP11.84□□□□□ -0.51
CACNA1D-227ENST00000637844 DCAF1Q9Y4B6 1507 aa11.69□□□□□ -0.54
CACNA1D-227ENST00000637844 DCAF8L2P0C7V8 631 aa11.62□□□□□ -0.55
CACNA1D-227ENST00000637844 ABCC9O60706 1549 aa11.56□□□□□ -0.56
CACNA1D-227ENST00000637844 MYO15BQ96JP2 1530 aa11.53□□□□□ -0.56
CACNA1D-227ENST00000637844 SHROOM4Q9ULL8 1493 aa11.48□□□□□ -0.57
CACNA1D-227ENST00000637844 NACADO15069 1562 aa11.48□□□□□ -0.57
CACNA1D-227ENST00000637844 RB1CC1Q8TDY2 1594 aa11.38□□□□□ -0.59
CACNA1D-227ENST00000637844 SCRIBQ14160 1630 aa11.31□□□□□ -0.6
CACNA1D-227ENST00000637844 UNC13AQ9UPW8 1703 aa11.12□□□□□ -0.63
CACNA1D-227ENST00000637844 SUPT5HO00267 1087 aaKnown RBP11.08□□□□□ -0.64
CACNA1D-227ENST00000637844 BICRAQ9NZM4 1560 aa10.94□□□□□ -0.66
CACNA1D-227ENST00000637844 BAZ1AQ9NRL2 1556 aaPredicted RBP10.93□□□□□ -0.66
CACNA1D-227ENST00000637844 RSF1Q96T23 1441 aaPredicted RBP10.91□□□□□ -0.66
CACNA1D-227ENST00000637844 CECR2Q9BXF3 1484 aa10.88□□□□□ -0.67
CACNA1D-227ENST00000637844 PABPN1Q86U42 306 aaKnown RBP eCLIP10.86□□□□□ -0.67
CACNA1D-227ENST00000637844 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
CACNA1D-227ENST00000637844 SMARCA4P51532 1647 aa10.85□□□□□ -0.67
CACNA1D-227ENST00000637844 WIZO95785 1651 aa10.81□□□□□ -0.68
CACNA1D-227ENST00000637844 TOP2AP11388 1531 aaKnown RBP10.73□□□□□ -0.69
CACNA1D-227ENST00000637844 PEG3Q9GZU2 1588 aa10.71□□□□□ -0.69
CACNA1D-227ENST00000637844 SMARCA2P51531 1590 aa10.69□□□□□ -0.7
CACNA1D-227ENST00000637844 EIF4G1Q04637 1599 aaKnown RBP10.65□□□□□ -0.7
CACNA1D-227ENST00000637844 ATAD2BQ9ULI0 1458 aa10.62□□□□□ -0.71
CACNA1D-227ENST00000637844 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
CACNA1D-227ENST00000637844 CHIC1Q5VXU3 224 aa10.59□□□□□ -0.71
CACNA1D-227ENST00000637844 HMGXB3Q12766 1538 aa10.57□□□□□ -0.72
CACNA1D-227ENST00000637844 CCDC88BA6NC98 1476 aa10.56□□□□□ -0.72
CACNA1D-227ENST00000637844 NCAPD3P42695 1498 aa10.53□□□□□ -0.72
CACNA1D-227ENST00000637844 CC2D2AQ9P2K1 1620 aa10.49□□□□□ -0.73
CACNA1D-227ENST00000637844 TRIM41Q8WV44 630 aa10.46□□□□□ -0.73
CACNA1D-227ENST00000637844 PRDM2Q13029 1718 aa10.38□□□□□ -0.75
CACNA1D-227ENST00000637844 ABCC8Q09428 1581 aa10.36□□□□□ -0.75
CACNA1D-227ENST00000637844 WRNQ14191 1432 aaPredicted RBP eCLIP10.32□□□□□ -0.76
CACNA1D-227ENST00000637844 CFTRP13569 1480 aa10.31□□□□□ -0.76
CACNA1D-227ENST00000637844 CADPSQ9ULU8 1353 aa10.26□□□□□ -0.77
CACNA1D-227ENST00000637844 SYNJ1O43426 1573 aa10.26□□□□□ -0.77
CACNA1D-227ENST00000637844 BIVM-ERCC5R4GMW8 1640 aa10.25□□□□□ -0.77
CACNA1D-227ENST00000637844 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
CACNA1D-227ENST00000637844 EEA1Q15075 1411 aa10.24□□□□□ -0.77
CACNA1D-227ENST00000637844 LAMC3Q9Y6N6 1575 aa10.23□□□□□ -0.77
CACNA1D-227ENST00000637844 FAM9AQ8IZU1 332 aaPredicted RBP10.22□□□□□ -0.77
CACNA1D-227ENST00000637844 LOC105371045A0A1W2PR82 267 aa10.17□□□□□ -0.78
CACNA1D-227ENST00000637844 FANCD2Q9BXW9 1451 aa10.17□□□□□ -0.78
CACNA1D-227ENST00000637844 CUX1P39880 1505 aa10.16□□□□□ -0.78
CACNA1D-227ENST00000637844 SOGA1O94964 1423 aa10.14□□□□□ -0.79
CACNA1D-227ENST00000637844 PDS5BQ9NTI5 1447 aa10.14□□□□□ -0.79
CACNA1D-227ENST00000637844 CEP164Q9UPV0 1460 aa10.13□□□□□ -0.79
CACNA1D-227ENST00000637844 NESP48681 1621 aa10.12□□□□□ -0.79
CACNA1D-227ENST00000637844 DNMBPQ6XZF7 1577 aa10.12□□□□□ -0.79
CACNA1D-227ENST00000637844 CSRNP3Q8WYN3 585 aa10.11□□□□□ -0.79
CACNA1D-227ENST00000637844 KIF21AQ7Z4S6 1674 aa10.09□□□□□ -0.79
CACNA1D-227ENST00000637844 KIF21BO75037 1637 aa10.09□□□□□ -0.79
CACNA1D-227ENST00000637844 RUSC2Q8N2Y8 1516 aa10.08□□□□□ -0.8
CACNA1D-227ENST00000637844 GOLGA3Q08378 1498 aa10.08□□□□□ -0.8
CACNA1D-227ENST00000637844 KIF27Q86VH2 1401 aa10.07□□□□□ -0.8
CACNA1D-227ENST00000637844 FGD5Q6ZNL6 1462 aa10.07□□□□□ -0.8
CACNA1D-227ENST00000637844 EHMT2Q96KQ7 1210 aa10.06□□□□□ -0.8
CACNA1D-227ENST00000637844 TOPBP1Q92547 1522 aa10.06□□□□□ -0.8
CACNA1D-227ENST00000637844 DNAJC5BQ9UF47 199 aa10.03□□□□□ -0.8
CACNA1D-227ENST00000637844 CUX2O14529 1486 aa10.02□□□□□ -0.81
CACNA1D-227ENST00000637844 URB2Q14146 1524 aaKnown RBP10.02□□□□□ -0.81
CACNA1D-227ENST00000637844 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.81
CACNA1D-227ENST00000637844 TNIKQ9UKE5 1360 aa10.01□□□□□ -0.81
CACNA1D-227ENST00000637844 UBTFP17480 764 aaKnown RBP10.01□□□□□ -0.81
CACNA1D-227ENST00000637844 POLA1P09884 1462 aaPredicted RBP10□□□□□ -0.81
CACNA1D-227ENST00000637844 MRC2Q9UBG0 1479 aa9.99□□□□□ -0.81
CACNA1D-227ENST00000637844 ABCA10Q8WWZ4 1543 aa9.98□□□□□ -0.81
CACNA1D-227ENST00000637844 WDR97A6NE52 1622 aa9.98□□□□□ -0.81
CACNA1D-227ENST00000637844 ERCC6Q03468 1493 aa9.98□□□□□ -0.81
CACNA1D-227ENST00000637844 CEP162Q5TB80 1403 aa9.97□□□□□ -0.81
CACNA1D-227ENST00000637844 PRXQ9BXM0 1461 aa9.96□□□□□ -0.82
CACNA1D-227ENST00000637844 RAPGEF2Q9Y4G8 1499 aa9.96□□□□□ -0.82
CACNA1D-227ENST00000637844 CUL7Q14999 1698 aa9.96□□□□□ -0.82
CACNA1D-227ENST00000637844 RAD54L2Q9Y4B4 1467 aa9.94□□□□□ -0.82
CACNA1D-227ENST00000637844 WDR62O43379 1518 aa9.93□□□□□ -0.82
CACNA1D-227ENST00000637844 ABCA5Q8WWZ7 1642 aa9.92□□□□□ -0.82
CACNA1D-227ENST00000637844 TARBP1Q13395 1621 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-227ENST00000637844 IGF1RP08069 1367 aa9.9□□□□□ -0.82
CACNA1D-227ENST00000637844 CLIP1P30622 1438 aa9.9□□□□□ -0.83
CACNA1D-227ENST00000637844 CARMIL1Q5VZK9 1371 aa9.89□□□□□ -0.83
CACNA1D-227ENST00000637844 THOC2Q8NI27 1593 aaKnown RBP9.89□□□□□ -0.83
CACNA1D-227ENST00000637844 PBRM1Q86U86 1689 aa9.89□□□□□ -0.83
CACNA1D-227ENST00000637844 GAPVD1Q14C86 1478 aa9.88□□□□□ -0.83
CACNA1D-227ENST00000637844 IFT140Q96RY7 1462 aa9.88□□□□□ -0.83
CACNA1D-227ENST00000637844 CTTNBP2Q8WZ74 1663 aa9.86□□□□□ -0.83
CACNA1D-227ENST00000637844 TRIM26Q12899 539 aaPredicted RBP9.84□□□□□ -0.83
CACNA1D-227ENST00000637844 TDRD9Q8NDG6 1382 aaKnown RBP9.84□□□□□ -0.83
CACNA1D-227ENST00000637844 GRIN2BQ13224 1484 aa9.82□□□□□ -0.84
CACNA1D-227ENST00000637844 VPS8Q8N3P4 1428 aa9.82□□□□□ -0.84
CACNA1D-227ENST00000637844 RANGAP1P46060 587 aaPredicted RBP9.81□□□□□ -0.84
CACNA1D-227ENST00000637844 EIF4G3O43432 1585 aaKnown RBP9.8□□□□□ -0.84
CACNA1D-227ENST00000637844 APLP2Q06481 763 aa9.8□□□□□ -0.84
CACNA1D-227ENST00000637844 PCGF6Q9BYE7 350 aa9.8□□□□□ -0.84
CACNA1D-227ENST00000637844 FHAD1B1AJZ9 1412 aa9.79□□□□□ -0.84
CACNA1D-227ENST00000637844 ADAMTS12P58397 1594 aa9.79□□□□□ -0.84
CACNA1D-227ENST00000637844 EFCAB5A4FU69 1503 aa9.78□□□□□ -0.84
CACNA1D-227ENST00000637844 AQRO60306 1485 aaKnown RBP eCLIP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms