RNA–Protein interactions for RNA: ENST00000637704.1

KCNQ2-243, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5

Gene KCNQ2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-243ENST00000637704 NISCHQ9Y2I1 1504 aa32.43■■■□□ 2.78
KCNQ2-243ENST00000637704 CCDC180Q9P1Z9 1646 aa28.88■■■□□ 2.21
KCNQ2-243ENST00000637704 ABCC9O60706 1549 aa28.1■■■□□ 2.09
KCNQ2-243ENST00000637704 NACADO15069 1562 aa27.16■■□□□ 1.94
KCNQ2-243ENST00000637704 RB1CC1Q8TDY2 1594 aa27.16■■□□□ 1.94
KCNQ2-243ENST00000637704 MYO15BQ96JP2 1530 aa27.06■■□□□ 1.92
KCNQ2-243ENST00000637704 ZCCHC6Q5VYS8 1495 aaKnown RBP27.03■■□□□ 1.92
KCNQ2-243ENST00000637704 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
KCNQ2-243ENST00000637704 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
KCNQ2-243ENST00000637704 UNC13AQ9UPW8 1703 aa26.45■■□□□ 1.83
KCNQ2-243ENST00000637704 BICRAQ9NZM4 1560 aa26.26■■□□□ 1.79
KCNQ2-243ENST00000637704 PABPN1Q86U42 306 aaKnown RBP eCLIP26.23■■□□□ 1.79
KCNQ2-243ENST00000637704 SCRIBQ14160 1630 aa26.21■■□□□ 1.79
KCNQ2-243ENST00000637704 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
KCNQ2-243ENST00000637704 DNAJC5BQ9UF47 199 aa25.73■■□□□ 1.71
KCNQ2-243ENST00000637704 EIF4G1Q04637 1599 aaKnown RBP25.59■■□□□ 1.69
KCNQ2-243ENST00000637704 CC2D2AQ9P2K1 1620 aa25.46■■□□□ 1.67
KCNQ2-243ENST00000637704 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
KCNQ2-243ENST00000637704 BAZ1AQ9NRL2 1556 aaPredicted RBP25.17■■□□□ 1.62
KCNQ2-243ENST00000637704 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
KCNQ2-243ENST00000637704 NCAPD3P42695 1498 aa25.04■■□□□ 1.6
KCNQ2-243ENST00000637704 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
KCNQ2-243ENST00000637704 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
KCNQ2-243ENST00000637704 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
KCNQ2-243ENST00000637704 MROH2BQ7Z745 1585 aa24.93■■□□□ 1.58
KCNQ2-243ENST00000637704 HMGXB3Q12766 1538 aa24.93■■□□□ 1.58
KCNQ2-243ENST00000637704 BAZ1BQ9UIG0 1483 aaKnown RBP24.82■■□□□ 1.56
KCNQ2-243ENST00000637704 RSF1Q96T23 1441 aaPredicted RBP24.69■■□□□ 1.54
KCNQ2-243ENST00000637704 WIZO95785 1651 aa24.65■■□□□ 1.54
KCNQ2-243ENST00000637704 TOP2AP11388 1531 aaKnown RBP24.47■■□□□ 1.51
KCNQ2-243ENST00000637704 LAMC3Q9Y6N6 1575 aa24.38■■□□□ 1.49
KCNQ2-243ENST00000637704 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
KCNQ2-243ENST00000637704 NESP48681 1621 aa24.3■■□□□ 1.48
KCNQ2-243ENST00000637704 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
KCNQ2-243ENST00000637704 PDS5BQ9NTI5 1447 aa24.23■■□□□ 1.47
KCNQ2-243ENST00000637704 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
KCNQ2-243ENST00000637704 CFTRP13569 1480 aa24.15■■□□□ 1.46
KCNQ2-243ENST00000637704 CUX2O14529 1486 aa24.08■■□□□ 1.45
KCNQ2-243ENST00000637704 KIF21AQ7Z4S6 1674 aa24.05■■□□□ 1.44
KCNQ2-243ENST00000637704 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
KCNQ2-243ENST00000637704 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
KCNQ2-243ENST00000637704 FANCD2Q9BXW9 1451 aa23.99■■□□□ 1.43
KCNQ2-243ENST00000637704 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
KCNQ2-243ENST00000637704 CEP164Q9UPV0 1460 aa23.97■■□□□ 1.43
KCNQ2-243ENST00000637704 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
KCNQ2-243ENST00000637704 WDR62O43379 1518 aa23.85■■□□□ 1.41
KCNQ2-243ENST00000637704 ABCC8Q09428 1581 aa23.71■■□□□ 1.39
KCNQ2-243ENST00000637704 URB2Q14146 1524 aaKnown RBP23.71■■□□□ 1.39
KCNQ2-243ENST00000637704 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
KCNQ2-243ENST00000637704 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
KCNQ2-243ENST00000637704 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
KCNQ2-243ENST00000637704 CUX1P39880 1505 aa23.41■■□□□ 1.34
KCNQ2-243ENST00000637704 POLA1P09884 1462 aaPredicted RBP23.4■■□□□ 1.34
KCNQ2-243ENST00000637704 FGD5Q6ZNL6 1462 aa23.34■■□□□ 1.33
KCNQ2-243ENST00000637704 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.33
KCNQ2-243ENST00000637704 SOGA1O94964 1423 aa23.32■■□□□ 1.32
KCNQ2-243ENST00000637704 WRNQ14191 1432 aaPredicted RBP eCLIP23.31■■□□□ 1.32
KCNQ2-243ENST00000637704 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
KCNQ2-243ENST00000637704 WDR97A6NE52 1622 aa23.27■■□□□ 1.32
KCNQ2-243ENST00000637704 DNAJC5Q9H3Z4 198 aa23.26■■□□□ 1.31
KCNQ2-243ENST00000637704 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
KCNQ2-243ENST00000637704 RAD54L2Q9Y4B4 1467 aa23.25■■□□□ 1.31
KCNQ2-243ENST00000637704 BIVM-ERCC5R4GMW8 1640 aa23.25■■□□□ 1.31
KCNQ2-243ENST00000637704 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
KCNQ2-243ENST00000637704 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
KCNQ2-243ENST00000637704 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.3
KCNQ2-243ENST00000637704 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
KCNQ2-243ENST00000637704 TDRD9Q8NDG6 1382 aaKnown RBP23.14■■□□□ 1.29
KCNQ2-243ENST00000637704 GRIN2BQ13224 1484 aa23.07■■□□□ 1.28
KCNQ2-243ENST00000637704 GAPVD1Q14C86 1478 aa23.06■■□□□ 1.28
KCNQ2-243ENST00000637704 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
KCNQ2-243ENST00000637704 ABCA5Q8WWZ7 1642 aa23.04■■□□□ 1.28
KCNQ2-243ENST00000637704 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
KCNQ2-243ENST00000637704 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
KCNQ2-243ENST00000637704 PBRM1Q86U86 1689 aa22.97■■□□□ 1.27
KCNQ2-243ENST00000637704 CHD1O14646 1710 aa22.91■■□□□ 1.26
KCNQ2-243ENST00000637704 ERICH3Q5RHP9 1530 aa22.91■■□□□ 1.26
KCNQ2-243ENST00000637704 SYNJ2O15056 1496 aa22.91■■□□□ 1.26
KCNQ2-243ENST00000637704 FBLN2P98095 1184 aa22.88■■□□□ 1.25
KCNQ2-243ENST00000637704 CHMP7Q8WUX9 453 aaPredicted RBP22.88■■□□□ 1.25
KCNQ2-243ENST00000637704 KIF27Q86VH2 1401 aa22.85■■□□□ 1.25
KCNQ2-243ENST00000637704 FHAD1B1AJZ9 1412 aa22.82■■□□□ 1.24
KCNQ2-243ENST00000637704 ADAMTS12P58397 1594 aa22.81■■□□□ 1.24
KCNQ2-243ENST00000637704 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
KCNQ2-243ENST00000637704 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
KCNQ2-243ENST00000637704 IGF1RP08069 1367 aa22.72■■□□□ 1.23
KCNQ2-243ENST00000637704 CLASP1Q7Z460 1538 aa22.71■■□□□ 1.23
KCNQ2-243ENST00000637704 CUL7Q14999 1698 aa22.69■■□□□ 1.22
KCNQ2-243ENST00000637704 NUP160Q12769 1436 aa22.67■■□□□ 1.22
KCNQ2-243ENST00000637704 ARHGEF11O15085 1522 aa22.64■■□□□ 1.21
KCNQ2-243ENST00000637704 RIMBP3CA6NJZ7 1639 aa22.62■■□□□ 1.21
KCNQ2-243ENST00000637704 RIMBP3BA6NNM3 1639 aa22.62■■□□□ 1.21
KCNQ2-243ENST00000637704 RIMBP3Q9UFD9 1639 aa22.62■■□□□ 1.21
KCNQ2-243ENST00000637704 CARMIL1Q5VZK9 1371 aa22.6■■□□□ 1.21
KCNQ2-243ENST00000637704 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
KCNQ2-243ENST00000637704 RUSC2Q8N2Y8 1516 aa22.51■■□□□ 1.19
KCNQ2-243ENST00000637704 EEA1Q15075 1411 aa22.48■■□□□ 1.19
KCNQ2-243ENST00000637704 SHROOM2Q13796 1616 aa22.48■■□□□ 1.19
KCNQ2-243ENST00000637704 RAPGEF2Q9Y4G8 1499 aa22.47■■□□□ 1.19
KCNQ2-243ENST00000637704 KIAA0586Q9BVV6 1533 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms