RNA–Protein interactions for RNA: ENST00000637656.1

KCNQ2-242, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5

Gene KCNQ2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-242ENST00000637656 NISCHQ9Y2I1 1504 aa27.78■■■□□ 2.04
KCNQ2-242ENST00000637656 CCDC180Q9P1Z9 1646 aa24.71■■□□□ 1.55
KCNQ2-242ENST00000637656 ABCC9O60706 1549 aa24.62■■□□□ 1.53
KCNQ2-242ENST00000637656 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
KCNQ2-242ENST00000637656 RB1CC1Q8TDY2 1594 aa23.49■■□□□ 1.35
KCNQ2-242ENST00000637656 NACADO15069 1562 aa23.4■■□□□ 1.34
KCNQ2-242ENST00000637656 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
KCNQ2-242ENST00000637656 ZCCHC6Q5VYS8 1495 aaKnown RBP23.06■■□□□ 1.28
KCNQ2-242ENST00000637656 PABPN1Q86U42 306 aaKnown RBP eCLIP23.04■■□□□ 1.28
KCNQ2-242ENST00000637656 DCAF1Q9Y4B6 1507 aa22.93■■□□□ 1.26
KCNQ2-242ENST00000637656 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
KCNQ2-242ENST00000637656 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.23
KCNQ2-242ENST00000637656 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
KCNQ2-242ENST00000637656 SCRIBQ14160 1630 aa22.62■■□□□ 1.21
KCNQ2-242ENST00000637656 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
KCNQ2-242ENST00000637656 EIF4G1Q04637 1599 aaKnown RBP22.2■■□□□ 1.14
KCNQ2-242ENST00000637656 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
KCNQ2-242ENST00000637656 CECR2Q9BXF3 1484 aa22.15■■□□□ 1.14
KCNQ2-242ENST00000637656 NCAPD3P42695 1498 aa21.62■■□□□ 1.05
KCNQ2-242ENST00000637656 ATAD2BQ9ULI0 1458 aa21.6■■□□□ 1.05
KCNQ2-242ENST00000637656 SMARCA4P51532 1647 aa21.58■■□□□ 1.04
KCNQ2-242ENST00000637656 BAZ1AQ9NRL2 1556 aaPredicted RBP21.55■■□□□ 1.04
KCNQ2-242ENST00000637656 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
KCNQ2-242ENST00000637656 HMGXB3Q12766 1538 aa21.44■■□□□ 1.02
KCNQ2-242ENST00000637656 BAZ1BQ9UIG0 1483 aaKnown RBP21.42■■□□□ 1.02
KCNQ2-242ENST00000637656 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
KCNQ2-242ENST00000637656 PEG3Q9GZU2 1588 aa21.33■■□□□ 1.01
KCNQ2-242ENST00000637656 ERCC6Q03468 1493 aa21.28■■□□□ 1
KCNQ2-242ENST00000637656 NESP48681 1621 aa21.18■□□□□ 0.98
KCNQ2-242ENST00000637656 WIZO95785 1651 aa21.12■□□□□ 0.97
KCNQ2-242ENST00000637656 RSF1Q96T23 1441 aaPredicted RBP21.1■□□□□ 0.97
KCNQ2-242ENST00000637656 CUX2O14529 1486 aa21.09■□□□□ 0.97
KCNQ2-242ENST00000637656 LAMC3Q9Y6N6 1575 aa21.05■□□□□ 0.96
KCNQ2-242ENST00000637656 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
KCNQ2-242ENST00000637656 PDS5BQ9NTI5 1447 aa21.03■□□□□ 0.96
KCNQ2-242ENST00000637656 TOP2AP11388 1531 aaKnown RBP20.91■□□□□ 0.94
KCNQ2-242ENST00000637656 DNAJC5Q9H3Z4 198 aa20.84■□□□□ 0.93
KCNQ2-242ENST00000637656 THOC2Q8NI27 1593 aaKnown RBP20.84■□□□□ 0.93
KCNQ2-242ENST00000637656 KIF21AQ7Z4S6 1674 aa20.81■□□□□ 0.92
KCNQ2-242ENST00000637656 CFTRP13569 1480 aa20.79■□□□□ 0.92
KCNQ2-242ENST00000637656 MRC2Q9UBG0 1479 aa20.78■□□□□ 0.92
KCNQ2-242ENST00000637656 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
KCNQ2-242ENST00000637656 CEP164Q9UPV0 1460 aa20.76■□□□□ 0.91
KCNQ2-242ENST00000637656 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
KCNQ2-242ENST00000637656 WDR62O43379 1518 aa20.66■□□□□ 0.9
KCNQ2-242ENST00000637656 URB2Q14146 1524 aaKnown RBP20.53■□□□□ 0.88
KCNQ2-242ENST00000637656 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
KCNQ2-242ENST00000637656 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
KCNQ2-242ENST00000637656 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
KCNQ2-242ENST00000637656 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
KCNQ2-242ENST00000637656 IFT140Q96RY7 1462 aa20.34■□□□□ 0.85
KCNQ2-242ENST00000637656 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
KCNQ2-242ENST00000637656 OSCARQ8IYS5 282 aa20.28■□□□□ 0.84
KCNQ2-242ENST00000637656 ZNF608Q9ULD9 1512 aaPredicted RBP20.25■□□□□ 0.83
KCNQ2-242ENST00000637656 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
KCNQ2-242ENST00000637656 SOGA1O94964 1423 aa20.16■□□□□ 0.82
KCNQ2-242ENST00000637656 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.82
KCNQ2-242ENST00000637656 RAD54L2Q9Y4B4 1467 aa20.13■□□□□ 0.81
KCNQ2-242ENST00000637656 TRIM41Q8WV44 630 aa20.12■□□□□ 0.81
KCNQ2-242ENST00000637656 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
KCNQ2-242ENST00000637656 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
KCNQ2-242ENST00000637656 EIF4G3O43432 1585 aaKnown RBP20.09■□□□□ 0.81
KCNQ2-242ENST00000637656 CUX1P39880 1505 aa20.09■□□□□ 0.81
KCNQ2-242ENST00000637656 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
KCNQ2-242ENST00000637656 FBLN2P98095 1184 aa20.08■□□□□ 0.81
KCNQ2-242ENST00000637656 CHMP7Q8WUX9 453 aaPredicted RBP19.95■□□□□ 0.78
KCNQ2-242ENST00000637656 GRIN2BQ13224 1484 aa19.93■□□□□ 0.78
KCNQ2-242ENST00000637656 SNAPC4Q5SXM2 1469 aa19.93■□□□□ 0.78
KCNQ2-242ENST00000637656 WDR97A6NE52 1622 aa19.93■□□□□ 0.78
KCNQ2-242ENST00000637656 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
KCNQ2-242ENST00000637656 GAPVD1Q14C86 1478 aa19.89■□□□□ 0.77
KCNQ2-242ENST00000637656 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
KCNQ2-242ENST00000637656 MAGI1Q96QZ7 1491 aaPredicted RBP19.88■□□□□ 0.77
KCNQ2-242ENST00000637656 CHD1O14646 1710 aa19.84■□□□□ 0.77
KCNQ2-242ENST00000637656 ARHGEF11O15085 1522 aa19.83■□□□□ 0.77
KCNQ2-242ENST00000637656 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
KCNQ2-242ENST00000637656 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
KCNQ2-242ENST00000637656 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
KCNQ2-242ENST00000637656 SYNJ2O15056 1496 aa19.81■□□□□ 0.76
KCNQ2-242ENST00000637656 TOP2BQ02880 1626 aa19.81■□□□□ 0.76
KCNQ2-242ENST00000637656 SYNJ1O43426 1573 aa19.8■□□□□ 0.76
KCNQ2-242ENST00000637656 CYB5RLQ6IPT4 315 aa19.8■□□□□ 0.76
KCNQ2-242ENST00000637656 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
KCNQ2-242ENST00000637656 ABCA5Q8WWZ7 1642 aa19.75■□□□□ 0.75
KCNQ2-242ENST00000637656 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
KCNQ2-242ENST00000637656 CLASP1Q7Z460 1538 aa19.68■□□□□ 0.74
KCNQ2-242ENST00000637656 FHAD1B1AJZ9 1412 aa19.67■□□□□ 0.74
KCNQ2-242ENST00000637656 ARAP1Q96P48 1450 aa19.66■□□□□ 0.74
KCNQ2-242ENST00000637656 GRIN2AQ12879 1464 aa19.65■□□□□ 0.74
KCNQ2-242ENST00000637656 ERICH3Q5RHP9 1530 aa19.62■□□□□ 0.73
KCNQ2-242ENST00000637656 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
KCNQ2-242ENST00000637656 NUP160Q12769 1436 aa19.57■□□□□ 0.72
KCNQ2-242ENST00000637656 KIF27Q86VH2 1401 aa19.56■□□□□ 0.72
KCNQ2-242ENST00000637656 TRHP20396 242 aaPredicted RBP19.54■□□□□ 0.72
KCNQ2-242ENST00000637656 CEP170Q5SW79 1584 aa19.51■□□□□ 0.71
KCNQ2-242ENST00000637656 IGF1RP08069 1367 aa19.5■□□□□ 0.71
KCNQ2-242ENST00000637656 JPH4Q96JJ6 628 aa19.47■□□□□ 0.71
KCNQ2-242ENST00000637656 CARMIL1Q5VZK9 1371 aa19.41■□□□□ 0.7
KCNQ2-242ENST00000637656 PRG4Q92954 1404 aaPredicted RBP19.41■□□□□ 0.7
KCNQ2-242ENST00000637656 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms