RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 NISCHQ9Y2I1 1504 aa10.94□□□□□ -0.66
SCN8A-213ENST00000637540 CCDC180Q9P1Z9 1646 aa9.53□□□□□ -0.88
SCN8A-213ENST00000637540 ZCCHC6Q5VYS8 1495 aaKnown RBP9.21□□□□□ -0.93
SCN8A-213ENST00000637540 DCAF1Q9Y4B6 1507 aa9.09□□□□□ -0.95
SCN8A-213ENST00000637540 MYO15BQ96JP2 1530 aa8.95□□□□□ -0.98
SCN8A-213ENST00000637540 SHROOM4Q9ULL8 1493 aa8.85□□□□□ -0.99
SCN8A-213ENST00000637540 ABCC9O60706 1549 aa8.82□□□□□ -1
SCN8A-213ENST00000637540 NACADO15069 1562 aa8.82□□□□□ -1
SCN8A-213ENST00000637540 DCAF8L2P0C7V8 631 aa8.8□□□□□ -1
SCN8A-213ENST00000637540 SCRIBQ14160 1630 aa8.69□□□□□ -1.02
SCN8A-213ENST00000637540 RB1CC1Q8TDY2 1594 aa8.69□□□□□ -1.02
SCN8A-213ENST00000637540 UNC13AQ9UPW8 1703 aa8.66□□□□□ -1.02
SCN8A-213ENST00000637540 SUPT5HO00267 1087 aaKnown RBP8.54□□□□□ -1.04
SCN8A-213ENST00000637540 BICRAQ9NZM4 1560 aa8.53□□□□□ -1.04
SCN8A-213ENST00000637540 RSF1Q96T23 1441 aaPredicted RBP8.51□□□□□ -1.05
SCN8A-213ENST00000637540 CECR2Q9BXF3 1484 aa8.5□□□□□ -1.05
SCN8A-213ENST00000637540 MROH2BQ7Z745 1585 aa8.47□□□□□ -1.05
SCN8A-213ENST00000637540 WIZO95785 1651 aa8.41□□□□□ -1.06
SCN8A-213ENST00000637540 SMARCA4P51532 1647 aa8.4□□□□□ -1.06
SCN8A-213ENST00000637540 BAZ1AQ9NRL2 1556 aaPredicted RBP8.4□□□□□ -1.06
SCN8A-213ENST00000637540 PEG3Q9GZU2 1588 aa8.34□□□□□ -1.07
SCN8A-213ENST00000637540 CHIC1Q5VXU3 224 aa8.33□□□□□ -1.08
SCN8A-213ENST00000637540 PABPN1Q86U42 306 aaKnown RBP eCLIP8.31□□□□□ -1.08
SCN8A-213ENST00000637540 TOP2AP11388 1531 aaKnown RBP8.29□□□□□ -1.08
SCN8A-213ENST00000637540 EIF4G1Q04637 1599 aaKnown RBP8.29□□□□□ -1.08
SCN8A-213ENST00000637540 SMARCA2P51531 1590 aa8.25□□□□□ -1.09
SCN8A-213ENST00000637540 ATAD2BQ9ULI0 1458 aa8.22□□□□□ -1.09
SCN8A-213ENST00000637540 CCDC88BA6NC98 1476 aa8.21□□□□□ -1.09
SCN8A-213ENST00000637540 HMGXB3Q12766 1538 aa8.14□□□□□ -1.11
SCN8A-213ENST00000637540 NCAPD3P42695 1498 aa8.14□□□□□ -1.11
SCN8A-213ENST00000637540 BAZ1BQ9UIG0 1483 aaKnown RBP8.12□□□□□ -1.11
SCN8A-213ENST00000637540 ABCC8Q09428 1581 aa8.05□□□□□ -1.12
SCN8A-213ENST00000637540 CC2D2AQ9P2K1 1620 aa8.05□□□□□ -1.12
SCN8A-213ENST00000637540 TRIM41Q8WV44 630 aa8.03□□□□□ -1.12
SCN8A-213ENST00000637540 PRDM2Q13029 1718 aa8.03□□□□□ -1.12
SCN8A-213ENST00000637540 LOC105371045A0A1W2PR82 267 aa7.99□□□□□ -1.13
SCN8A-213ENST00000637540 SYNJ1O43426 1573 aa7.98□□□□□ -1.13
SCN8A-213ENST00000637540 CFTRP13569 1480 aa7.98□□□□□ -1.13
SCN8A-213ENST00000637540 BIVM-ERCC5R4GMW8 1640 aa7.97□□□□□ -1.13
SCN8A-213ENST00000637540 WRNQ14191 1432 aaPredicted RBP eCLIP7.95□□□□□ -1.14
SCN8A-213ENST00000637540 TOP2BQ02880 1626 aa7.95□□□□□ -1.14
SCN8A-213ENST00000637540 SOGA1O94964 1423 aa7.92□□□□□ -1.14
SCN8A-213ENST00000637540 RUSC2Q8N2Y8 1516 aa7.92□□□□□ -1.14
SCN8A-213ENST00000637540 CUX1P39880 1505 aa7.9□□□□□ -1.14
SCN8A-213ENST00000637540 CADPSQ9ULU8 1353 aa7.9□□□□□ -1.14
SCN8A-213ENST00000637540 EEA1Q15075 1411 aa7.89□□□□□ -1.15
SCN8A-213ENST00000637540 FAM9AQ8IZU1 332 aaPredicted RBP7.86□□□□□ -1.15
SCN8A-213ENST00000637540 DNAJC5BQ9UF47 199 aa7.84□□□□□ -1.15
SCN8A-213ENST00000637540 KIF21BO75037 1637 aa7.84□□□□□ -1.15
SCN8A-213ENST00000637540 LAMC3Q9Y6N6 1575 aa7.84□□□□□ -1.15
SCN8A-213ENST00000637540 NESP48681 1621 aa7.82□□□□□ -1.16
SCN8A-213ENST00000637540 CSRNP3Q8WYN3 585 aa7.82□□□□□ -1.16
SCN8A-213ENST00000637540 TNIKQ9UKE5 1360 aa7.8□□□□□ -1.16
SCN8A-213ENST00000637540 FANCD2Q9BXW9 1451 aa7.8□□□□□ -1.16
SCN8A-213ENST00000637540 DNMBPQ6XZF7 1577 aa7.79□□□□□ -1.16
SCN8A-213ENST00000637540 GOLGA3Q08378 1498 aa7.78□□□□□ -1.16
SCN8A-213ENST00000637540 PRXQ9BXM0 1461 aa7.78□□□□□ -1.16
SCN8A-213ENST00000637540 KIF21AQ7Z4S6 1674 aa7.78□□□□□ -1.16
SCN8A-213ENST00000637540 CEP164Q9UPV0 1460 aa7.77□□□□□ -1.17
SCN8A-213ENST00000637540 WDR97A6NE52 1622 aa7.77□□□□□ -1.17
SCN8A-213ENST00000637540 FGD5Q6ZNL6 1462 aa7.76□□□□□ -1.17
SCN8A-213ENST00000637540 ERICH3Q5RHP9 1530 aa7.76□□□□□ -1.17
SCN8A-213ENST00000637540 TOPBP1Q92547 1522 aa7.76□□□□□ -1.17
SCN8A-213ENST00000637540 RAPGEF2Q9Y4G8 1499 aa7.75□□□□□ -1.17
SCN8A-213ENST00000637540 URB2Q14146 1524 aaKnown RBP7.74□□□□□ -1.17
SCN8A-213ENST00000637540 CEP162Q5TB80 1403 aa7.73□□□□□ -1.17
SCN8A-213ENST00000637540 KIF27Q86VH2 1401 aa7.73□□□□□ -1.17
SCN8A-213ENST00000637540 POLA1P09884 1462 aaPredicted RBP7.73□□□□□ -1.17
SCN8A-213ENST00000637540 ABCA10Q8WWZ4 1543 aa7.73□□□□□ -1.17
SCN8A-213ENST00000637540 IGF1RP08069 1367 aa7.71□□□□□ -1.17
SCN8A-213ENST00000637540 PDS5BQ9NTI5 1447 aa7.7□□□□□ -1.18
SCN8A-213ENST00000637540 EHMT2Q96KQ7 1210 aa7.7□□□□□ -1.18
SCN8A-213ENST00000637540 TARBP1Q13395 1621 aaKnown RBP7.7□□□□□ -1.18
SCN8A-213ENST00000637540 CUX2O14529 1486 aa7.69□□□□□ -1.18
SCN8A-213ENST00000637540 ABCA5Q8WWZ7 1642 aa7.69□□□□□ -1.18
SCN8A-213ENST00000637540 RAD54L2Q9Y4B4 1467 aa7.68□□□□□ -1.18
SCN8A-213ENST00000637540 TRIM26Q12899 539 aaPredicted RBP7.66□□□□□ -1.18
SCN8A-213ENST00000637540 UBTFP17480 764 aaKnown RBP7.65□□□□□ -1.18
SCN8A-213ENST00000637540 PCGF6Q9BYE7 350 aa7.65□□□□□ -1.18
SCN8A-213ENST00000637540 CUL7Q14999 1698 aa7.64□□□□□ -1.19
SCN8A-213ENST00000637540 CLIP1P30622 1438 aa7.64□□□□□ -1.19
SCN8A-213ENST00000637540 WDR62O43379 1518 aa7.63□□□□□ -1.19
SCN8A-213ENST00000637540 MRC2Q9UBG0 1479 aa7.63□□□□□ -1.19
SCN8A-213ENST00000637540 CARMIL1Q5VZK9 1371 aa7.63□□□□□ -1.19
SCN8A-213ENST00000637540 THOC2Q8NI27 1593 aaKnown RBP7.63□□□□□ -1.19
SCN8A-213ENST00000637540 ARAP1Q96P48 1450 aa7.62□□□□□ -1.19
SCN8A-213ENST00000637540 VPS8Q8N3P4 1428 aa7.61□□□□□ -1.19
SCN8A-213ENST00000637540 PBRM1Q86U86 1689 aa7.61□□□□□ -1.19
SCN8A-213ENST00000637540 ARHGAP35Q9NRY4 1499 aa7.61□□□□□ -1.19
SCN8A-213ENST00000637540 CTTNBP2Q8WZ74 1663 aa7.6□□□□□ -1.19
SCN8A-213ENST00000637540 GAPVD1Q14C86 1478 aa7.59□□□□□ -1.19
SCN8A-213ENST00000637540 TDRD9Q8NDG6 1382 aaKnown RBP7.57□□□□□ -1.2
SCN8A-213ENST00000637540 HRCP23327 699 aa7.56□□□□□ -1.2
SCN8A-213ENST00000637540 IFT140Q96RY7 1462 aa7.55□□□□□ -1.2
SCN8A-213ENST00000637540 ADAMTS12P58397 1594 aa7.54□□□□□ -1.2
SCN8A-213ENST00000637540 SAMD9Q5K651 1589 aa7.54□□□□□ -1.2
SCN8A-213ENST00000637540 ZNF608Q9ULD9 1512 aaPredicted RBP7.53□□□□□ -1.2
SCN8A-213ENST00000637540 PPARGC1BQ86YN6 1023 aaKnown RBP7.53□□□□□ -1.2
SCN8A-213ENST00000637540 AQRO60306 1485 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCN8A-213ENST00000637540 MAP3K1Q13233 1512 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms