RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
CACNA1A-239ENST00000637297 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
CACNA1A-239ENST00000637297 ABCC9O60706 1549 aa18.91■□□□□ 0.62
CACNA1A-239ENST00000637297 DCAF8L2P0C7V8 631 aa18.41■□□□□ 0.54
CACNA1A-239ENST00000637297 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
CACNA1A-239ENST00000637297 NACADO15069 1562 aa18.24■□□□□ 0.51
CACNA1A-239ENST00000637297 ZCCHC6Q5VYS8 1495 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-239ENST00000637297 MYO15BQ96JP2 1530 aa18.11■□□□□ 0.49
CACNA1A-239ENST00000637297 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.49
CACNA1A-239ENST00000637297 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
CACNA1A-239ENST00000637297 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
CACNA1A-239ENST00000637297 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
CACNA1A-239ENST00000637297 BICRAQ9NZM4 1560 aa17.62■□□□□ 0.41
CACNA1A-239ENST00000637297 SHROOM4Q9ULL8 1493 aa17.45■□□□□ 0.38
CACNA1A-239ENST00000637297 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
CACNA1A-239ENST00000637297 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-239ENST00000637297 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
CACNA1A-239ENST00000637297 CECR2Q9BXF3 1484 aa17.03■□□□□ 0.32
CACNA1A-239ENST00000637297 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-239ENST00000637297 SMARCA4P51532 1647 aa16.96■□□□□ 0.31
CACNA1A-239ENST00000637297 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
CACNA1A-239ENST00000637297 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
CACNA1A-239ENST00000637297 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.28
CACNA1A-239ENST00000637297 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
CACNA1A-239ENST00000637297 PEG3Q9GZU2 1588 aa16.75■□□□□ 0.27
CACNA1A-239ENST00000637297 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-239ENST00000637297 HMGXB3Q12766 1538 aa16.73■□□□□ 0.27
CACNA1A-239ENST00000637297 WIZO95785 1651 aa16.72■□□□□ 0.27
CACNA1A-239ENST00000637297 RSF1Q96T23 1441 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-239ENST00000637297 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-239ENST00000637297 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-239ENST00000637297 NESP48681 1621 aa16.37■□□□□ 0.21
CACNA1A-239ENST00000637297 LAMC3Q9Y6N6 1575 aa16.37■□□□□ 0.21
CACNA1A-239ENST00000637297 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
CACNA1A-239ENST00000637297 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
CACNA1A-239ENST00000637297 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
CACNA1A-239ENST00000637297 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
CACNA1A-239ENST00000637297 CFTRP13569 1480 aa16.24■□□□□ 0.19
CACNA1A-239ENST00000637297 KIF21AQ7Z4S6 1674 aa16.22■□□□□ 0.19
CACNA1A-239ENST00000637297 PRDM2Q13029 1718 aa16.2■□□□□ 0.18
CACNA1A-239ENST00000637297 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
CACNA1A-239ENST00000637297 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
CACNA1A-239ENST00000637297 THOC2Q8NI27 1593 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-239ENST00000637297 MRC2Q9UBG0 1479 aa16.07■□□□□ 0.16
CACNA1A-239ENST00000637297 CUX2O14529 1486 aa16.06■□□□□ 0.16
CACNA1A-239ENST00000637297 WDR62O43379 1518 aa15.99■□□□□ 0.15
CACNA1A-239ENST00000637297 URB2Q14146 1524 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-239ENST00000637297 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
CACNA1A-239ENST00000637297 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
CACNA1A-239ENST00000637297 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
CACNA1A-239ENST00000637297 CUX1P39880 1505 aa15.81■□□□□ 0.12
CACNA1A-239ENST00000637297 WRNQ14191 1432 aaPredicted RBP eCLIP15.79■□□□□ 0.12
CACNA1A-239ENST00000637297 IFT140Q96RY7 1462 aa15.78■□□□□ 0.12
CACNA1A-239ENST00000637297 POLA1P09884 1462 aaPredicted RBP15.77■□□□□ 0.11
CACNA1A-239ENST00000637297 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
CACNA1A-239ENST00000637297 SOGA1O94964 1423 aa15.76■□□□□ 0.11
CACNA1A-239ENST00000637297 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
CACNA1A-239ENST00000637297 BIVM-ERCC5R4GMW8 1640 aa15.72■□□□□ 0.11
CACNA1A-239ENST00000637297 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.11
CACNA1A-239ENST00000637297 SYNJ1O43426 1573 aa15.71■□□□□ 0.11
CACNA1A-239ENST00000637297 TARBP1Q13395 1621 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-239ENST00000637297 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-239ENST00000637297 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
CACNA1A-239ENST00000637297 EIF4G3O43432 1585 aaKnown RBP15.64■□□□□ 0.09
CACNA1A-239ENST00000637297 AQRO60306 1485 aaKnown RBP eCLIP15.64■□□□□ 0.09
CACNA1A-239ENST00000637297 WDR97A6NE52 1622 aa15.61■□□□□ 0.09
CACNA1A-239ENST00000637297 ABCA10Q8WWZ4 1543 aa15.6■□□□□ 0.09
CACNA1A-239ENST00000637297 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
CACNA1A-239ENST00000637297 GAPVD1Q14C86 1478 aa15.56■□□□□ 0.08
CACNA1A-239ENST00000637297 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
CACNA1A-239ENST00000637297 GRIN2BQ13224 1484 aa15.53■□□□□ 0.08
CACNA1A-239ENST00000637297 FBLN2P98095 1184 aa15.53■□□□□ 0.08
CACNA1A-239ENST00000637297 ABCA5Q8WWZ7 1642 aa15.51■□□□□ 0.07
CACNA1A-239ENST00000637297 SNAPC4Q5SXM2 1469 aa15.49■□□□□ 0.07
CACNA1A-239ENST00000637297 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
CACNA1A-239ENST00000637297 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-239ENST00000637297 MAGI1Q96QZ7 1491 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-239ENST00000637297 KIF27Q86VH2 1401 aa15.47■□□□□ 0.07
CACNA1A-239ENST00000637297 CHD1O14646 1710 aa15.46■□□□□ 0.07
CACNA1A-239ENST00000637297 DNAJC5Q9H3Z4 198 aa15.45■□□□□ 0.06
CACNA1A-239ENST00000637297 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
CACNA1A-239ENST00000637297 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
CACNA1A-239ENST00000637297 CHIC1Q5VXU3 224 aa15.41■□□□□ 0.06
CACNA1A-239ENST00000637297 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
CACNA1A-239ENST00000637297 ADAMTS12P58397 1594 aa15.36■□□□□ 0.05
CACNA1A-239ENST00000637297 IGF1RP08069 1367 aa15.36■□□□□ 0.05
CACNA1A-239ENST00000637297 CUL7Q14999 1698 aa15.34■□□□□ 0.05
CACNA1A-239ENST00000637297 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.04
CACNA1A-239ENST00000637297 GRIN2AQ12879 1464 aa15.32■□□□□ 0.04
CACNA1A-239ENST00000637297 CARMIL1Q5VZK9 1371 aa15.31■□□□□ 0.04
CACNA1A-239ENST00000637297 FAM9AQ8IZU1 332 aaPredicted RBP15.27■□□□□ 0.04
CACNA1A-239ENST00000637297 EEA1Q15075 1411 aa15.25■□□□□ 0.03
CACNA1A-239ENST00000637297 CSRNP3Q8WYN3 585 aa15.24■□□□□ 0.03
CACNA1A-239ENST00000637297 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
CACNA1A-239ENST00000637297 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
CACNA1A-239ENST00000637297 RAPGEF2Q9Y4G8 1499 aa15.22■□□□□ 0.03
CACNA1A-239ENST00000637297 NUP160Q12769 1436 aa15.22■□□□□ 0.03
CACNA1A-239ENST00000637297 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
CACNA1A-239ENST00000637297 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
CACNA1A-239ENST00000637297 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms