RNA–Protein interactions for RNA: ENST00000637243.1

CHRNA4-218, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 85 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-218ENST00000637243 NISCHQ9Y2I1 1504 aa15.39■□□□□ 0.05
CHRNA4-218ENST00000637243 ABCC9O60706 1549 aa14.32□□□□□ -0.12
CHRNA4-218ENST00000637243 CCDC180Q9P1Z9 1646 aa13.96□□□□□ -0.17
CHRNA4-218ENST00000637243 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
CHRNA4-218ENST00000637243 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
CHRNA4-218ENST00000637243 PABPN1Q86U42 306 aaKnown RBP eCLIP13.27□□□□□ -0.29
CHRNA4-218ENST00000637243 UNC13AQ9UPW8 1703 aa13.27□□□□□ -0.29
CHRNA4-218ENST00000637243 NACADO15069 1562 aa13.24□□□□□ -0.29
CHRNA4-218ENST00000637243 BICRAQ9NZM4 1560 aa13.19□□□□□ -0.3
CHRNA4-218ENST00000637243 DCAF8L2P0C7V8 631 aa13.03□□□□□ -0.32
CHRNA4-218ENST00000637243 MYO15BQ96JP2 1530 aa12.95□□□□□ -0.34
CHRNA4-218ENST00000637243 CC2D2AQ9P2K1 1620 aa12.94□□□□□ -0.34
CHRNA4-218ENST00000637243 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
CHRNA4-218ENST00000637243 DNAJC5Q9H3Z4 198 aa12.89□□□□□ -0.35
CHRNA4-218ENST00000637243 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
CHRNA4-218ENST00000637243 SHROOM4Q9ULL8 1493 aa12.8□□□□□ -0.36
CHRNA4-218ENST00000637243 SCRIBQ14160 1630 aa12.72□□□□□ -0.37
CHRNA4-218ENST00000637243 ZCCHC6Q5VYS8 1495 aaKnown RBP12.69□□□□□ -0.38
CHRNA4-218ENST00000637243 DCAF1Q9Y4B6 1507 aa12.67□□□□□ -0.38
CHRNA4-218ENST00000637243 CUX2O14529 1486 aa12.44□□□□□ -0.42
CHRNA4-218ENST00000637243 ERCC6Q03468 1493 aa12.3□□□□□ -0.44
CHRNA4-218ENST00000637243 NCAPD3P42695 1498 aa12.27□□□□□ -0.45
CHRNA4-218ENST00000637243 NESP48681 1621 aa12.26□□□□□ -0.45
CHRNA4-218ENST00000637243 THOC2Q8NI27 1593 aaKnown RBP12.2□□□□□ -0.46
CHRNA4-218ENST00000637243 ATAD2BQ9ULI0 1458 aa12.19□□□□□ -0.46
CHRNA4-218ENST00000637243 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
CHRNA4-218ENST00000637243 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
CHRNA4-218ENST00000637243 SMARCA4P51532 1647 aa12.1□□□□□ -0.47
CHRNA4-218ENST00000637243 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
CHRNA4-218ENST00000637243 SMARCA2P51531 1590 aa12.08□□□□□ -0.48
CHRNA4-218ENST00000637243 LAMC3Q9Y6N6 1575 aa12.02□□□□□ -0.49
CHRNA4-218ENST00000637243 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
CHRNA4-218ENST00000637243 PEG3Q9GZU2 1588 aa11.98□□□□□ -0.49
CHRNA4-218ENST00000637243 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
CHRNA4-218ENST00000637243 PDS5BQ9NTI5 1447 aa11.91□□□□□ -0.5
CHRNA4-218ENST00000637243 MROH2BQ7Z745 1585 aa11.9□□□□□ -0.5
CHRNA4-218ENST00000637243 WDR62O43379 1518 aa11.9□□□□□ -0.5
CHRNA4-218ENST00000637243 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
CHRNA4-218ENST00000637243 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
CHRNA4-218ENST00000637243 RIMBP3CA6NJZ7 1639 aa11.78□□□□□ -0.52
CHRNA4-218ENST00000637243 RIMBP3BA6NNM3 1639 aa11.78□□□□□ -0.52
CHRNA4-218ENST00000637243 RIMBP3Q9UFD9 1639 aa11.78□□□□□ -0.52
CHRNA4-218ENST00000637243 OSCARQ8IYS5 282 aa11.77□□□□□ -0.53
CHRNA4-218ENST00000637243 CEP164Q9UPV0 1460 aa11.75□□□□□ -0.53
CHRNA4-218ENST00000637243 WIZO95785 1651 aa11.74□□□□□ -0.53
CHRNA4-218ENST00000637243 URB2Q14146 1524 aaKnown RBP11.72□□□□□ -0.53
CHRNA4-218ENST00000637243 FANCD2Q9BXW9 1451 aa11.72□□□□□ -0.53
CHRNA4-218ENST00000637243 ARHGEF11O15085 1522 aa11.67□□□□□ -0.54
CHRNA4-218ENST00000637243 CFTRP13569 1480 aa11.66□□□□□ -0.54
CHRNA4-218ENST00000637243 ZNF608Q9ULD9 1512 aaPredicted RBP11.63□□□□□ -0.55
CHRNA4-218ENST00000637243 ARAP1Q96P48 1450 aa11.57□□□□□ -0.56
CHRNA4-218ENST00000637243 CYB5RLQ6IPT4 315 aa11.55□□□□□ -0.56
CHRNA4-218ENST00000637243 PRDM2Q13029 1718 aa11.54□□□□□ -0.56
CHRNA4-218ENST00000637243 CHD1O14646 1710 aa11.53□□□□□ -0.56
CHRNA4-218ENST00000637243 IFT140Q96RY7 1462 aa11.52□□□□□ -0.56
CHRNA4-218ENST00000637243 EIF4G3O43432 1585 aaKnown RBP11.52□□□□□ -0.57
CHRNA4-218ENST00000637243 TOP2AP11388 1531 aaKnown RBP11.51□□□□□ -0.57
CHRNA4-218ENST00000637243 RSF1Q96T23 1441 aaPredicted RBP11.49□□□□□ -0.57
CHRNA4-218ENST00000637243 TOPBP1Q92547 1522 aa11.49□□□□□ -0.57
CHRNA4-218ENST00000637243 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
CHRNA4-218ENST00000637243 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.58
CHRNA4-218ENST00000637243 AQRO60306 1485 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHRNA4-218ENST00000637243 CCDC88BA6NC98 1476 aa11.41□□□□□ -0.58
CHRNA4-218ENST00000637243 DNMBPQ6XZF7 1577 aa11.39□□□□□ -0.59
CHRNA4-218ENST00000637243 CLASP1Q7Z460 1538 aa11.39□□□□□ -0.59
CHRNA4-218ENST00000637243 AEBP2Q6ZN18 517 aaPredicted RBP11.36□□□□□ -0.59
CHRNA4-218ENST00000637243 POLA1P09884 1462 aaPredicted RBP11.35□□□□□ -0.59
CHRNA4-218ENST00000637243 RAD54L2Q9Y4B4 1467 aa11.34□□□□□ -0.59
CHRNA4-218ENST00000637243 FBLN2P98095 1184 aa11.34□□□□□ -0.59
CHRNA4-218ENST00000637243 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
CHRNA4-218ENST00000637243 SNAPC4Q5SXM2 1469 aa11.3□□□□□ -0.6
CHRNA4-218ENST00000637243 TDRD9Q8NDG6 1382 aaKnown RBP11.29□□□□□ -0.6
CHRNA4-218ENST00000637243 SYNJ1O43426 1573 aa11.25□□□□□ -0.61
CHRNA4-218ENST00000637243 SOGA1O94964 1423 aa11.24□□□□□ -0.61
CHRNA4-218ENST00000637243 ERCC6L2Q5T890 1561 aa11.24□□□□□ -0.61
CHRNA4-218ENST00000637243 GAPVD1Q14C86 1478 aa11.23□□□□□ -0.61
CHRNA4-218ENST00000637243 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
CHRNA4-218ENST00000637243 FGD5Q6ZNL6 1462 aa11.22□□□□□ -0.61
CHRNA4-218ENST00000637243 MAGI1Q96QZ7 1491 aaPredicted RBP11.22□□□□□ -0.61
CHRNA4-218ENST00000637243 CUX1P39880 1505 aa11.19□□□□□ -0.62
CHRNA4-218ENST00000637243 SYNJ2O15056 1496 aa11.19□□□□□ -0.62
CHRNA4-218ENST00000637243 CHMP7Q8WUX9 453 aaPredicted RBP11.19□□□□□ -0.62
CHRNA4-218ENST00000637243 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
CHRNA4-218ENST00000637243 PBRM1Q86U86 1689 aa11.18□□□□□ -0.62
CHRNA4-218ENST00000637243 KIF13AQ9H1H9 1805 aa11.18□□□□□ -0.62
CHRNA4-218ENST00000637243 ABCA5Q8WWZ7 1642 aa11.12□□□□□ -0.63
CHRNA4-218ENST00000637243 CEP170Q5SW79 1584 aa11.11□□□□□ -0.63
CHRNA4-218ENST00000637243 SHROOM2Q13796 1616 aa11.09□□□□□ -0.63
CHRNA4-218ENST00000637243 NUP160Q12769 1436 aa11.07□□□□□ -0.64
CHRNA4-218ENST00000637243 GRIN2AQ12879 1464 aa11.06□□□□□ -0.64
CHRNA4-218ENST00000637243 ABCA10Q8WWZ4 1543 aa11.06□□□□□ -0.64
CHRNA4-218ENST00000637243 ILDR1Q86SU0 546 aaPredicted RBP11.06□□□□□ -0.64
CHRNA4-218ENST00000637243 KDM4FA0A1W2PPD8 638 aa11.05□□□□□ -0.64
CHRNA4-218ENST00000637243 ADAMTS12P58397 1594 aa11.04□□□□□ -0.64
CHRNA4-218ENST00000637243 ABCC10Q5T3U5 1492 aa10.99□□□□□ -0.65
CHRNA4-218ENST00000637243 DIP2BQ9P265 1576 aa10.98□□□□□ -0.65
CHRNA4-218ENST00000637243 PRG4Q92954 1404 aaPredicted RBP10.95□□□□□ -0.66
CHRNA4-218ENST00000637243 ADCY10Q96PN6 1610 aa10.95□□□□□ -0.66
CHRNA4-218ENST00000637243 MAPKBP1O60336 1514 aa10.94□□□□□ -0.66
CHRNA4-218ENST00000637243 FAM69CQ0P6D2 419 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms