RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 NISCHQ9Y2I1 1504 aa19.27■□□□□ 0.67
CACNA1A-232ENST00000636966 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
CACNA1A-232ENST00000636966 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-232ENST00000636966 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
CACNA1A-232ENST00000636966 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.23
CACNA1A-232ENST00000636966 MYO15BQ96JP2 1530 aa16.52■□□□□ 0.23
CACNA1A-232ENST00000636966 ZCCHC6Q5VYS8 1495 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-232ENST00000636966 NACADO15069 1562 aa15.98■□□□□ 0.15
CACNA1A-232ENST00000636966 ABCC9O60706 1549 aa15.98■□□□□ 0.15
CACNA1A-232ENST00000636966 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
CACNA1A-232ENST00000636966 DCAF8L2P0C7V8 631 aa15.74■□□□□ 0.11
CACNA1A-232ENST00000636966 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
CACNA1A-232ENST00000636966 SHROOM4Q9ULL8 1493 aa15.69■□□□□ 0.1
CACNA1A-232ENST00000636966 BICRAQ9NZM4 1560 aa15.51■□□□□ 0.07
CACNA1A-232ENST00000636966 SCRIBQ14160 1630 aa15.33■□□□□ 0.04
CACNA1A-232ENST00000636966 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
CACNA1A-232ENST00000636966 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-232ENST00000636966 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 0
CACNA1A-232ENST00000636966 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
CACNA1A-232ENST00000636966 CECR2Q9BXF3 1484 aa14.88□□□□□ -0.03
CACNA1A-232ENST00000636966 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-232ENST00000636966 SMARCA2P51531 1590 aa14.86□□□□□ -0.03
CACNA1A-232ENST00000636966 HMGXB3Q12766 1538 aa14.81□□□□□ -0.04
CACNA1A-232ENST00000636966 EIF4G1Q04637 1599 aaKnown RBP14.8□□□□□ -0.04
CACNA1A-232ENST00000636966 PRDM2Q13029 1718 aa14.76□□□□□ -0.05
CACNA1A-232ENST00000636966 MROH2BQ7Z745 1585 aa14.74□□□□□ -0.05
CACNA1A-232ENST00000636966 RSF1Q96T23 1441 aaPredicted RBP14.7□□□□□ -0.06
CACNA1A-232ENST00000636966 SUPT5HO00267 1087 aaKnown RBP14.68□□□□□ -0.06
CACNA1A-232ENST00000636966 TOP2AP11388 1531 aaKnown RBP14.65□□□□□ -0.06
CACNA1A-232ENST00000636966 NCAPD3P42695 1498 aa14.62□□□□□ -0.07
CACNA1A-232ENST00000636966 WIZO95785 1651 aa14.61□□□□□ -0.07
CACNA1A-232ENST00000636966 ATAD2BQ9ULI0 1458 aa14.53□□□□□ -0.08
CACNA1A-232ENST00000636966 CC2D2AQ9P2K1 1620 aa14.53□□□□□ -0.08
CACNA1A-232ENST00000636966 DNAJC5BQ9UF47 199 aa14.43□□□□□ -0.1
CACNA1A-232ENST00000636966 SENP3Q9H4L4 574 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-232ENST00000636966 BAZ1BQ9UIG0 1483 aaKnown RBP14.33□□□□□ -0.12
CACNA1A-232ENST00000636966 CCDC88BA6NC98 1476 aa14.27□□□□□ -0.12
CACNA1A-232ENST00000636966 LAMC3Q9Y6N6 1575 aa14.24□□□□□ -0.13
CACNA1A-232ENST00000636966 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
CACNA1A-232ENST00000636966 CFTRP13569 1480 aa14.18□□□□□ -0.14
CACNA1A-232ENST00000636966 WDR97A6NE52 1622 aa14.17□□□□□ -0.14
CACNA1A-232ENST00000636966 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-232ENST00000636966 NESP48681 1621 aa14.03□□□□□ -0.16
CACNA1A-232ENST00000636966 TOP2BQ02880 1626 aa14.02□□□□□ -0.17
CACNA1A-232ENST00000636966 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
CACNA1A-232ENST00000636966 CADPSQ9ULU8 1353 aa13.97□□□□□ -0.17
CACNA1A-232ENST00000636966 WDR62O43379 1518 aa13.96□□□□□ -0.17
CACNA1A-232ENST00000636966 ABCC8Q09428 1581 aa13.95□□□□□ -0.18
CACNA1A-232ENST00000636966 DNMBPQ6XZF7 1577 aa13.89□□□□□ -0.19
CACNA1A-232ENST00000636966 TARBP1Q13395 1621 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-232ENST00000636966 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
CACNA1A-232ENST00000636966 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
CACNA1A-232ENST00000636966 ABCA5Q8WWZ7 1642 aa13.83□□□□□ -0.2
CACNA1A-232ENST00000636966 CUX1P39880 1505 aa13.83□□□□□ -0.2
CACNA1A-232ENST00000636966 FANCD2Q9BXW9 1451 aa13.82□□□□□ -0.2
CACNA1A-232ENST00000636966 WRNQ14191 1432 aaPredicted RBP eCLIP13.78□□□□□ -0.2
CACNA1A-232ENST00000636966 TRIM41Q8WV44 630 aa13.75□□□□□ -0.21
CACNA1A-232ENST00000636966 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-232ENST00000636966 PDS5BQ9NTI5 1447 aa13.73□□□□□ -0.21
CACNA1A-232ENST00000636966 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
CACNA1A-232ENST00000636966 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
CACNA1A-232ENST00000636966 TOPBP1Q92547 1522 aa13.69□□□□□ -0.22
CACNA1A-232ENST00000636966 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
CACNA1A-232ENST00000636966 MRC2Q9UBG0 1479 aa13.67□□□□□ -0.22
CACNA1A-232ENST00000636966 KIF21BO75037 1637 aa13.66□□□□□ -0.22
CACNA1A-232ENST00000636966 RUSC2Q8N2Y8 1516 aa13.65□□□□□ -0.22
CACNA1A-232ENST00000636966 SOGA1O94964 1423 aa13.64□□□□□ -0.23
CACNA1A-232ENST00000636966 CUL7Q14999 1698 aa13.63□□□□□ -0.23
CACNA1A-232ENST00000636966 ERCC6Q03468 1493 aa13.62□□□□□ -0.23
CACNA1A-232ENST00000636966 CUX2O14529 1486 aa13.62□□□□□ -0.23
CACNA1A-232ENST00000636966 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
CACNA1A-232ENST00000636966 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-232ENST00000636966 RAD54L2Q9Y4B4 1467 aa13.59□□□□□ -0.23
CACNA1A-232ENST00000636966 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
CACNA1A-232ENST00000636966 FAM9AQ8IZU1 332 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-232ENST00000636966 EEA1Q15075 1411 aa13.54□□□□□ -0.24
CACNA1A-232ENST00000636966 ADAMTS12P58397 1594 aa13.5□□□□□ -0.25
CACNA1A-232ENST00000636966 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
CACNA1A-232ENST00000636966 LOC105371045A0A1W2PR82 267 aa13.49□□□□□ -0.25
CACNA1A-232ENST00000636966 IFT140Q96RY7 1462 aa13.49□□□□□ -0.25
CACNA1A-232ENST00000636966 CTTNBP2Q8WZ74 1663 aa13.49□□□□□ -0.25
CACNA1A-232ENST00000636966 SHROOM2Q13796 1616 aa13.48□□□□□ -0.25
CACNA1A-232ENST00000636966 FOXD1Q16676 465 aa13.47□□□□□ -0.25
CACNA1A-232ENST00000636966 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
CACNA1A-232ENST00000636966 ZNF608Q9ULD9 1512 aaPredicted RBP13.47□□□□□ -0.25
CACNA1A-232ENST00000636966 TDRD9Q8NDG6 1382 aaKnown RBP13.46□□□□□ -0.26
CACNA1A-232ENST00000636966 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
CACNA1A-232ENST00000636966 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.26
CACNA1A-232ENST00000636966 IGF1RP08069 1367 aa13.41□□□□□ -0.26
CACNA1A-232ENST00000636966 KIF27Q86VH2 1401 aa13.4□□□□□ -0.26
CACNA1A-232ENST00000636966 CSRNP3Q8WYN3 585 aa13.4□□□□□ -0.26
CACNA1A-232ENST00000636966 SAMD9Q5K651 1589 aa13.38□□□□□ -0.27
CACNA1A-232ENST00000636966 GAPVD1Q14C86 1478 aa13.35□□□□□ -0.27
CACNA1A-232ENST00000636966 RAPGEF2Q9Y4G8 1499 aa13.35□□□□□ -0.27
CACNA1A-232ENST00000636966 CLASP1Q7Z460 1538 aa13.34□□□□□ -0.27
CACNA1A-232ENST00000636966 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-232ENST00000636966 PPP6R1Q9UPN7 881 aa13.29□□□□□ -0.28
CACNA1A-232ENST00000636966 CHD1O14646 1710 aa13.29□□□□□ -0.28
CACNA1A-232ENST00000636966 CARMIL1Q5VZK9 1371 aa13.27□□□□□ -0.28
CACNA1A-232ENST00000636966 GRIN2BQ13224 1484 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms