RNA–Protein interactions for RNA: ENST00000636957.1

CHRNA7-222, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 622 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-222ENST00000636957 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
CHRNA7-222ENST00000636957 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.07
CHRNA7-222ENST00000636957 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
CHRNA7-222ENST00000636957 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.68
CHRNA7-222ENST00000636957 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
CHRNA7-222ENST00000636957 ABCC9O60706 1549 aa18.59■□□□□ 0.57
CHRNA7-222ENST00000636957 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
CHRNA7-222ENST00000636957 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
CHRNA7-222ENST00000636957 NACADO15069 1562 aa18.05■□□□□ 0.48
CHRNA7-222ENST00000636957 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
CHRNA7-222ENST00000636957 MYO15BQ96JP2 1530 aa18.01■□□□□ 0.47
CHRNA7-222ENST00000636957 DCAF1Q9Y4B6 1507 aa18.01■□□□□ 0.47
CHRNA7-222ENST00000636957 DCAF8L2P0C7V8 631 aa17.93■□□□□ 0.46
CHRNA7-222ENST00000636957 UNC13AQ9UPW8 1703 aa17.73■□□□□ 0.43
CHRNA7-222ENST00000636957 FOXD1Q16676 465 aa17.6■□□□□ 0.41
CHRNA7-222ENST00000636957 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
CHRNA7-222ENST00000636957 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
CHRNA7-222ENST00000636957 SHROOM4Q9ULL8 1493 aa17.33■□□□□ 0.37
CHRNA7-222ENST00000636957 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
CHRNA7-222ENST00000636957 EIF4G1Q04637 1599 aaKnown RBP16.99■□□□□ 0.31
CHRNA7-222ENST00000636957 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
CHRNA7-222ENST00000636957 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
CHRNA7-222ENST00000636957 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
CHRNA7-222ENST00000636957 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
CHRNA7-222ENST00000636957 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
CHRNA7-222ENST00000636957 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
CHRNA7-222ENST00000636957 MSH5O43196 834 aa16.72■□□□□ 0.27
CHRNA7-222ENST00000636957 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
CHRNA7-222ENST00000636957 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
CHRNA7-222ENST00000636957 PEG3Q9GZU2 1588 aa16.68■□□□□ 0.26
CHRNA7-222ENST00000636957 ATAD2BQ9ULI0 1458 aa16.64■□□□□ 0.25
CHRNA7-222ENST00000636957 NCAPD3P42695 1498 aa16.61■□□□□ 0.25
CHRNA7-222ENST00000636957 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
CHRNA7-222ENST00000636957 WIZO95785 1651 aa16.59■□□□□ 0.25
CHRNA7-222ENST00000636957 RSF1Q96T23 1441 aaPredicted RBP16.57■□□□□ 0.24
CHRNA7-222ENST00000636957 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
CHRNA7-222ENST00000636957 PIAS4Q8N2W9 510 aaPredicted RBP16.47■□□□□ 0.23
CHRNA7-222ENST00000636957 TOP2AP11388 1531 aaKnown RBP16.42■□□□□ 0.22
CHRNA7-222ENST00000636957 PLPPR3Q6T4P5 718 aa16.31■□□□□ 0.2
CHRNA7-222ENST00000636957 SUPT5HO00267 1087 aaKnown RBP16.23■□□□□ 0.19
CHRNA7-222ENST00000636957 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
CHRNA7-222ENST00000636957 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
CHRNA7-222ENST00000636957 PRDM2Q13029 1718 aa16.16■□□□□ 0.18
CHRNA7-222ENST00000636957 NESP48681 1621 aa16.14■□□□□ 0.17
CHRNA7-222ENST00000636957 CADPSQ9ULU8 1353 aa16.11■□□□□ 0.17
CHRNA7-222ENST00000636957 ADRA2BP18089 450 aa16.1■□□□□ 0.17
CHRNA7-222ENST00000636957 PPP6R1Q9UPN7 881 aa16.1■□□□□ 0.17
CHRNA7-222ENST00000636957 CFTRP13569 1480 aa16.09■□□□□ 0.17
CHRNA7-222ENST00000636957 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
CHRNA7-222ENST00000636957 ERCC6Q03468 1493 aa16.02■□□□□ 0.15
CHRNA7-222ENST00000636957 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
CHRNA7-222ENST00000636957 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
CHRNA7-222ENST00000636957 THOC2Q8NI27 1593 aaKnown RBP15.94■□□□□ 0.14
CHRNA7-222ENST00000636957 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
CHRNA7-222ENST00000636957 MRC2Q9UBG0 1479 aa15.86■□□□□ 0.13
CHRNA7-222ENST00000636957 WDR62O43379 1518 aa15.84■□□□□ 0.13
CHRNA7-222ENST00000636957 CUX2O14529 1486 aa15.8■□□□□ 0.12
CHRNA7-222ENST00000636957 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
CHRNA7-222ENST00000636957 DNMBPQ6XZF7 1577 aa15.76■□□□□ 0.11
CHRNA7-222ENST00000636957 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
CHRNA7-222ENST00000636957 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
CHRNA7-222ENST00000636957 CUX1P39880 1505 aa15.68■□□□□ 0.1
CHRNA7-222ENST00000636957 BIVM-ERCC5R4GMW8 1640 aa15.67■□□□□ 0.1
CHRNA7-222ENST00000636957 TOP2BQ02880 1626 aa15.64■□□□□ 0.09
CHRNA7-222ENST00000636957 SYNJ1O43426 1573 aa15.63■□□□□ 0.09
CHRNA7-222ENST00000636957 WRNQ14191 1432 aaPredicted RBP eCLIP15.63■□□□□ 0.09
CHRNA7-222ENST00000636957 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
CHRNA7-222ENST00000636957 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
CHRNA7-222ENST00000636957 TARBP1Q13395 1621 aaKnown RBP15.59■□□□□ 0.09
CHRNA7-222ENST00000636957 IFT140Q96RY7 1462 aa15.58■□□□□ 0.08
CHRNA7-222ENST00000636957 WDR97A6NE52 1622 aa15.56■□□□□ 0.08
CHRNA7-222ENST00000636957 SOGA1O94964 1423 aa15.51■□□□□ 0.07
CHRNA7-222ENST00000636957 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
CHRNA7-222ENST00000636957 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
CHRNA7-222ENST00000636957 ZNF608Q9ULD9 1512 aaPredicted RBP15.47■□□□□ 0.07
CHRNA7-222ENST00000636957 ABCA10Q8WWZ4 1543 aa15.46■□□□□ 0.07
CHRNA7-222ENST00000636957 ABCA5Q8WWZ7 1642 aa15.43■□□□□ 0.06
CHRNA7-222ENST00000636957 PBRM1Q86U86 1689 aa15.43■□□□□ 0.06
CHRNA7-222ENST00000636957 AQRO60306 1485 aaKnown RBP eCLIP15.39■□□□□ 0.05
CHRNA7-222ENST00000636957 TDRD9Q8NDG6 1382 aaKnown RBP15.37■□□□□ 0.05
CHRNA7-222ENST00000636957 GAPVD1Q14C86 1478 aa15.36■□□□□ 0.05
CHRNA7-222ENST00000636957 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
CHRNA7-222ENST00000636957 GRIN2BQ13224 1484 aa15.33■□□□□ 0.05
CHRNA7-222ENST00000636957 CHD1O14646 1710 aa15.31■□□□□ 0.04
CHRNA7-222ENST00000636957 ERICH3Q5RHP9 1530 aa15.3■□□□□ 0.04
CHRNA7-222ENST00000636957 MAGI1Q96QZ7 1491 aaPredicted RBP15.29■□□□□ 0.04
CHRNA7-222ENST00000636957 KIF27Q86VH2 1401 aa15.29■□□□□ 0.04
CHRNA7-222ENST00000636957 SNAPC4Q5SXM2 1469 aa15.28■□□□□ 0.04
CHRNA7-222ENST00000636957 ADAMTS12P58397 1594 aa15.26■□□□□ 0.03
CHRNA7-222ENST00000636957 CUL7Q14999 1698 aa15.25■□□□□ 0.03
CHRNA7-222ENST00000636957 SYNJ2O15056 1496 aa15.22■□□□□ 0.03
CHRNA7-222ENST00000636957 RUSC2Q8N2Y8 1516 aa15.18■□□□□ 0.02
CHRNA7-222ENST00000636957 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
CHRNA7-222ENST00000636957 IGF1RP08069 1367 aa15.16■□□□□ 0.02
CHRNA7-222ENST00000636957 GRIN2AQ12879 1464 aa15.15■□□□□ 0.02
CHRNA7-222ENST00000636957 EEA1Q15075 1411 aa15.15■□□□□ 0.02
CHRNA7-222ENST00000636957 FBLN2P98095 1184 aa15.13■□□□□ 0.01
CHRNA7-222ENST00000636957 CHMP7Q8WUX9 453 aaPredicted RBP15.13■□□□□ 0.01
CHRNA7-222ENST00000636957 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
CHRNA7-222ENST00000636957 CARMIL1Q5VZK9 1371 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms