RNA–Protein interactions for RNA: ENST00000636710.1

TCF4-279, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 161 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-279ENST00000636710 NISCHQ9Y2I1 1504 aa16.81■□□□□ 0.28
TCF4-279ENST00000636710 ABCC9O60706 1549 aa15.78■□□□□ 0.12
TCF4-279ENST00000636710 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
TCF4-279ENST00000636710 CCDC180Q9P1Z9 1646 aa15.18■□□□□ 0.02
TCF4-279ENST00000636710 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.05
TCF4-279ENST00000636710 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
TCF4-279ENST00000636710 DNAJC5Q9H3Z4 198 aa14.6□□□□□ -0.07
TCF4-279ENST00000636710 NACADO15069 1562 aa14.6□□□□□ -0.07
TCF4-279ENST00000636710 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
TCF4-279ENST00000636710 DCAF8L2P0C7V8 631 aa14.38□□□□□ -0.11
TCF4-279ENST00000636710 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
TCF4-279ENST00000636710 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
TCF4-279ENST00000636710 SHROOM4Q9ULL8 1493 aa14.24□□□□□ -0.13
TCF4-279ENST00000636710 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.13
TCF4-279ENST00000636710 CC2D2AQ9P2K1 1620 aa14.19□□□□□ -0.14
TCF4-279ENST00000636710 EIF4G1Q04637 1599 aaKnown RBP14.07□□□□□ -0.16
TCF4-279ENST00000636710 DCAF1Q9Y4B6 1507 aa13.91□□□□□ -0.18
TCF4-279ENST00000636710 CUX2O14529 1486 aa13.88□□□□□ -0.19
TCF4-279ENST00000636710 SCRIBQ14160 1630 aa13.81□□□□□ -0.2
TCF4-279ENST00000636710 ZCCHC6Q5VYS8 1495 aaKnown RBP13.8□□□□□ -0.2
TCF4-279ENST00000636710 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
TCF4-279ENST00000636710 NCAPD3P42695 1498 aa13.59□□□□□ -0.23
TCF4-279ENST00000636710 TRIM41Q8WV44 630 aa13.57□□□□□ -0.24
TCF4-279ENST00000636710 ATAD2BQ9ULI0 1458 aa13.41□□□□□ -0.26
TCF4-279ENST00000636710 NESP48681 1621 aa13.4□□□□□ -0.26
TCF4-279ENST00000636710 HMGXB3Q12766 1538 aa13.32□□□□□ -0.28
TCF4-279ENST00000636710 THOC2Q8NI27 1593 aaKnown RBP13.32□□□□□ -0.28
TCF4-279ENST00000636710 SMARCA2P51531 1590 aa13.28□□□□□ -0.28
TCF4-279ENST00000636710 PDS5BQ9NTI5 1447 aa13.25□□□□□ -0.29
TCF4-279ENST00000636710 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
TCF4-279ENST00000636710 LAMC3Q9Y6N6 1575 aa13.22□□□□□ -0.29
TCF4-279ENST00000636710 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
TCF4-279ENST00000636710 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
TCF4-279ENST00000636710 CADPSQ9ULU8 1353 aa13.13□□□□□ -0.31
TCF4-279ENST00000636710 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
TCF4-279ENST00000636710 PEG3Q9GZU2 1588 aa13.11□□□□□ -0.31
TCF4-279ENST00000636710 WDR62O43379 1518 aa13.09□□□□□ -0.31
TCF4-279ENST00000636710 KIF21AQ7Z4S6 1674 aa13.05□□□□□ -0.32
TCF4-279ENST00000636710 BAZ1AQ9NRL2 1556 aaPredicted RBP13.04□□□□□ -0.32
TCF4-279ENST00000636710 CEP164Q9UPV0 1460 aa12.93□□□□□ -0.34
TCF4-279ENST00000636710 RIMBP3CA6NJZ7 1639 aa12.92□□□□□ -0.34
TCF4-279ENST00000636710 RIMBP3BA6NNM3 1639 aa12.92□□□□□ -0.34
TCF4-279ENST00000636710 RIMBP3Q9UFD9 1639 aa12.92□□□□□ -0.34
TCF4-279ENST00000636710 MROH2BQ7Z745 1585 aa12.91□□□□□ -0.34
TCF4-279ENST00000636710 CYB5RLQ6IPT4 315 aa12.91□□□□□ -0.34
TCF4-279ENST00000636710 ARHGEF11O15085 1522 aa12.9□□□□□ -0.34
TCF4-279ENST00000636710 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
TCF4-279ENST00000636710 AEBP2Q6ZN18 517 aaPredicted RBP12.89□□□□□ -0.35
TCF4-279ENST00000636710 TRHP20396 242 aaPredicted RBP12.88□□□□□ -0.35
TCF4-279ENST00000636710 CFTRP13569 1480 aa12.85□□□□□ -0.35
TCF4-279ENST00000636710 URB2Q14146 1524 aaKnown RBP12.82□□□□□ -0.36
TCF4-279ENST00000636710 ARAP1Q96P48 1450 aa12.75□□□□□ -0.37
TCF4-279ENST00000636710 IFT140Q96RY7 1462 aa12.75□□□□□ -0.37
TCF4-279ENST00000636710 ZNF608Q9ULD9 1512 aaPredicted RBP12.74□□□□□ -0.37
TCF4-279ENST00000636710 RSF1Q96T23 1441 aaPredicted RBP12.72□□□□□ -0.37
TCF4-279ENST00000636710 WIZO95785 1651 aa12.62□□□□□ -0.39
TCF4-279ENST00000636710 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.39
TCF4-279ENST00000636710 FBLN2P98095 1184 aa12.58□□□□□ -0.4
TCF4-279ENST00000636710 TOPBP1Q92547 1522 aa12.57□□□□□ -0.4
TCF4-279ENST00000636710 ABCC8Q09428 1581 aa12.57□□□□□ -0.4
TCF4-279ENST00000636710 EIF4G3O43432 1585 aaKnown RBP12.54□□□□□ -0.4
TCF4-279ENST00000636710 TOP2AP11388 1531 aaKnown RBP12.51□□□□□ -0.41
TCF4-279ENST00000636710 CLASP1Q7Z460 1538 aa12.48□□□□□ -0.41
TCF4-279ENST00000636710 ILDR1Q86SU0 546 aaPredicted RBP12.48□□□□□ -0.41
TCF4-279ENST00000636710 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
TCF4-279ENST00000636710 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
TCF4-279ENST00000636710 TDRD9Q8NDG6 1382 aaKnown RBP12.44□□□□□ -0.42
TCF4-279ENST00000636710 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
TCF4-279ENST00000636710 CHD1O14646 1710 aa12.44□□□□□ -0.42
TCF4-279ENST00000636710 CCDC88BA6NC98 1476 aa12.43□□□□□ -0.42
TCF4-279ENST00000636710 POLA1P09884 1462 aaPredicted RBP12.43□□□□□ -0.42
TCF4-279ENST00000636710 GAPVD1Q14C86 1478 aa12.42□□□□□ -0.42
TCF4-279ENST00000636710 SOGA1O94964 1423 aa12.4□□□□□ -0.42
TCF4-279ENST00000636710 SNAPC4Q5SXM2 1469 aa12.39□□□□□ -0.43
TCF4-279ENST00000636710 MAGI1Q96QZ7 1491 aaPredicted RBP12.38□□□□□ -0.43
TCF4-279ENST00000636710 RAD54L2Q9Y4B4 1467 aa12.38□□□□□ -0.43
TCF4-279ENST00000636710 SYNJ1O43426 1573 aa12.38□□□□□ -0.43
TCF4-279ENST00000636710 SYNJ2O15056 1496 aa12.35□□□□□ -0.43
TCF4-279ENST00000636710 KDM4FA0A1W2PPD8 638 aa12.34□□□□□ -0.43
TCF4-279ENST00000636710 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
TCF4-279ENST00000636710 GRIN2BQ13224 1484 aa12.34□□□□□ -0.43
TCF4-279ENST00000636710 WDR97A6NE52 1622 aa12.33□□□□□ -0.43
TCF4-279ENST00000636710 FGD5Q6ZNL6 1462 aa12.24□□□□□ -0.45
TCF4-279ENST00000636710 FAM69CQ0P6D2 419 aa12.21□□□□□ -0.45
TCF4-279ENST00000636710 ERCC6L2Q5T890 1561 aa12.21□□□□□ -0.46
TCF4-279ENST00000636710 NUP160Q12769 1436 aa12.2□□□□□ -0.46
TCF4-279ENST00000636710 ABCC10Q5T3U5 1492 aa12.19□□□□□ -0.46
TCF4-279ENST00000636710 GRIN2AQ12879 1464 aa12.15□□□□□ -0.46
TCF4-279ENST00000636710 CEP170Q5SW79 1584 aa12.15□□□□□ -0.46
TCF4-279ENST00000636710 CUX1P39880 1505 aa12.15□□□□□ -0.46
TCF4-279ENST00000636710 ABCA10Q8WWZ4 1543 aa12.13□□□□□ -0.47
TCF4-279ENST00000636710 NPM1P06748 294 aaKnown RBP eCLIP12.11□□□□□ -0.47
TCF4-279ENST00000636710 JPH4Q96JJ6 628 aa12.11□□□□□ -0.47
TCF4-279ENST00000636710 KIF13AQ9H1H9 1805 aa12.1□□□□□ -0.47
TCF4-279ENST00000636710 SHROOM2Q13796 1616 aa12.09□□□□□ -0.47
TCF4-279ENST00000636710 MAPKBP1O60336 1514 aa12.09□□□□□ -0.47
TCF4-279ENST00000636710 PRG4Q92954 1404 aaPredicted RBP12.08□□□□□ -0.48
TCF4-279ENST00000636710 FHAD1B1AJZ9 1412 aa12.07□□□□□ -0.48
TCF4-279ENST00000636710 ABCA5Q8WWZ7 1642 aa12.06□□□□□ -0.48
TCF4-279ENST00000636710 FBXO41Q8TF61 875 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms