RNA–Protein interactions for RNA: ENST00000636629.1

CACNA1D-215, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2

Gene CACNA1D, Length 1,749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-215ENST00000636629 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
CACNA1D-215ENST00000636629 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
CACNA1D-215ENST00000636629 ABCC9O60706 1549 aa27.68■■■□□ 2.02
CACNA1D-215ENST00000636629 ZCCHC6Q5VYS8 1495 aaKnown RBP27.53■■■□□ 2
CACNA1D-215ENST00000636629 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
CACNA1D-215ENST00000636629 DCAF1Q9Y4B6 1507 aa27.1■■□□□ 1.93
CACNA1D-215ENST00000636629 MYO15BQ96JP2 1530 aa26.89■■□□□ 1.89
CACNA1D-215ENST00000636629 NACADO15069 1562 aa26.88■■□□□ 1.89
CACNA1D-215ENST00000636629 SHROOM4Q9ULL8 1493 aa26.76■■□□□ 1.87
CACNA1D-215ENST00000636629 RB1CC1Q8TDY2 1594 aa26.75■■□□□ 1.87
CACNA1D-215ENST00000636629 SCRIBQ14160 1630 aa26.51■■□□□ 1.84
CACNA1D-215ENST00000636629 UNC13AQ9UPW8 1703 aa26.15■■□□□ 1.78
CACNA1D-215ENST00000636629 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
CACNA1D-215ENST00000636629 BICRAQ9NZM4 1560 aa26■■□□□ 1.75
CACNA1D-215ENST00000636629 CECR2Q9BXF3 1484 aa25.67■■□□□ 1.7
CACNA1D-215ENST00000636629 SUPT5HO00267 1087 aaKnown RBP25.57■■□□□ 1.68
CACNA1D-215ENST00000636629 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
CACNA1D-215ENST00000636629 RSF1Q96T23 1441 aaPredicted RBP25.42■■□□□ 1.66
CACNA1D-215ENST00000636629 BAZ1AQ9NRL2 1556 aaPredicted RBP25.38■■□□□ 1.65
CACNA1D-215ENST00000636629 SMARCA4P51532 1647 aa25.33■■□□□ 1.65
CACNA1D-215ENST00000636629 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
CACNA1D-215ENST00000636629 EIF4G1Q04637 1599 aaKnown RBP25.23■■□□□ 1.63
CACNA1D-215ENST00000636629 WIZO95785 1651 aa25.18■■□□□ 1.62
CACNA1D-215ENST00000636629 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
CACNA1D-215ENST00000636629 PEG3Q9GZU2 1588 aa24.98■■□□□ 1.59
CACNA1D-215ENST00000636629 SMARCA2P51531 1590 aa24.96■■□□□ 1.59
CACNA1D-215ENST00000636629 CC2D2AQ9P2K1 1620 aa24.96■■□□□ 1.59
CACNA1D-215ENST00000636629 TOP2AP11388 1531 aaKnown RBP24.88■■□□□ 1.57
CACNA1D-215ENST00000636629 BAZ1BQ9UIG0 1483 aaKnown RBP24.88■■□□□ 1.57
CACNA1D-215ENST00000636629 NCAPD3P42695 1498 aa24.86■■□□□ 1.57
CACNA1D-215ENST00000636629 AEBP2Q6ZN18 517 aaPredicted RBP24.86■■□□□ 1.57
CACNA1D-215ENST00000636629 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
CACNA1D-215ENST00000636629 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
CACNA1D-215ENST00000636629 CCDC88BA6NC98 1476 aa24.69■■□□□ 1.54
CACNA1D-215ENST00000636629 CADPSQ9ULU8 1353 aa24.23■■□□□ 1.47
CACNA1D-215ENST00000636629 CFTRP13569 1480 aa24.22■■□□□ 1.47
CACNA1D-215ENST00000636629 NESP48681 1621 aa24.19■■□□□ 1.46
CACNA1D-215ENST00000636629 ABCC8Q09428 1581 aa24.07■■□□□ 1.44
CACNA1D-215ENST00000636629 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
CACNA1D-215ENST00000636629 TRIM41Q8WV44 630 aa24■■□□□ 1.43
CACNA1D-215ENST00000636629 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
CACNA1D-215ENST00000636629 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
CACNA1D-215ENST00000636629 PRDM2Q13029 1718 aa23.92■■□□□ 1.42
CACNA1D-215ENST00000636629 PDS5BQ9NTI5 1447 aa23.91■■□□□ 1.42
CACNA1D-215ENST00000636629 SYNJ1O43426 1573 aa23.83■■□□□ 1.41
CACNA1D-215ENST00000636629 CEP164Q9UPV0 1460 aa23.83■■□□□ 1.41
CACNA1D-215ENST00000636629 KIF21AQ7Z4S6 1674 aa23.79■■□□□ 1.4
CACNA1D-215ENST00000636629 CUX1P39880 1505 aa23.79■■□□□ 1.4
CACNA1D-215ENST00000636629 ERCC6Q03468 1493 aa23.74■■□□□ 1.39
CACNA1D-215ENST00000636629 TOP2BQ02880 1626 aa23.71■■□□□ 1.39
CACNA1D-215ENST00000636629 URB2Q14146 1524 aaKnown RBP23.71■■□□□ 1.39
CACNA1D-215ENST00000636629 BIVM-ERCC5R4GMW8 1640 aa23.67■■□□□ 1.38
CACNA1D-215ENST00000636629 TOPBP1Q92547 1522 aa23.66■■□□□ 1.38
CACNA1D-215ENST00000636629 FAM9AQ8IZU1 332 aaPredicted RBP23.65■■□□□ 1.38
CACNA1D-215ENST00000636629 DNMBPQ6XZF7 1577 aa23.63■■□□□ 1.37
CACNA1D-215ENST00000636629 MRC2Q9UBG0 1479 aa23.63■■□□□ 1.37
CACNA1D-215ENST00000636629 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
CACNA1D-215ENST00000636629 SOGA1O94964 1423 aa23.58■■□□□ 1.36
CACNA1D-215ENST00000636629 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
CACNA1D-215ENST00000636629 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
CACNA1D-215ENST00000636629 RAD54L2Q9Y4B4 1467 aa23.51■■□□□ 1.35
CACNA1D-215ENST00000636629 THOC2Q8NI27 1593 aaKnown RBP23.49■■□□□ 1.35
CACNA1D-215ENST00000636629 WDR62O43379 1518 aa23.48■■□□□ 1.35
CACNA1D-215ENST00000636629 EHMT2Q96KQ7 1210 aa23.41■■□□□ 1.34
CACNA1D-215ENST00000636629 CUX2O14529 1486 aa23.4■■□□□ 1.34
CACNA1D-215ENST00000636629 LOC105371045A0A1W2PR82 267 aa23.37■■□□□ 1.33
CACNA1D-215ENST00000636629 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
CACNA1D-215ENST00000636629 KIF27Q86VH2 1401 aa23.34■■□□□ 1.33
CACNA1D-215ENST00000636629 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.33
CACNA1D-215ENST00000636629 TDRD9Q8NDG6 1382 aaKnown RBP23.33■■□□□ 1.33
CACNA1D-215ENST00000636629 EEA1Q15075 1411 aa23.31■■□□□ 1.32
CACNA1D-215ENST00000636629 TARBP1Q13395 1621 aaKnown RBP23.3■■□□□ 1.32
CACNA1D-215ENST00000636629 IFT140Q96RY7 1462 aa23.28■■□□□ 1.32
CACNA1D-215ENST00000636629 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
CACNA1D-215ENST00000636629 WDR97A6NE52 1622 aa23.23■■□□□ 1.31
CACNA1D-215ENST00000636629 AQRO60306 1485 aaKnown RBP eCLIP23.22■■□□□ 1.31
CACNA1D-215ENST00000636629 IGF1RP08069 1367 aa23.21■■□□□ 1.31
CACNA1D-215ENST00000636629 GAPVD1Q14C86 1478 aa23.18■■□□□ 1.3
CACNA1D-215ENST00000636629 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
CACNA1D-215ENST00000636629 PRXQ9BXM0 1461 aa23.08■■□□□ 1.29
CACNA1D-215ENST00000636629 RAPGEF2Q9Y4G8 1499 aa23.08■■□□□ 1.29
CACNA1D-215ENST00000636629 CARMIL1Q5VZK9 1371 aa23.08■■□□□ 1.28
CACNA1D-215ENST00000636629 EIF4G3O43432 1585 aaKnown RBP23.07■■□□□ 1.28
CACNA1D-215ENST00000636629 UBTFP17480 764 aaKnown RBP23.05■■□□□ 1.28
CACNA1D-215ENST00000636629 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
CACNA1D-215ENST00000636629 GOLGA3Q08378 1498 aa23.03■■□□□ 1.28
CACNA1D-215ENST00000636629 KIF21BO75037 1637 aa23.03■■□□□ 1.28
CACNA1D-215ENST00000636629 ERICH3Q5RHP9 1530 aa23.03■■□□□ 1.28
CACNA1D-215ENST00000636629 PBRM1Q86U86 1689 aa22.99■■□□□ 1.27
CACNA1D-215ENST00000636629 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
CACNA1D-215ENST00000636629 CUL7Q14999 1698 aa22.93■■□□□ 1.26
CACNA1D-215ENST00000636629 FHAD1B1AJZ9 1412 aa22.92■■□□□ 1.26
CACNA1D-215ENST00000636629 TNIKQ9UKE5 1360 aa22.91■■□□□ 1.26
CACNA1D-215ENST00000636629 RANGAP1P46060 587 aaPredicted RBP22.9■■□□□ 1.26
CACNA1D-215ENST00000636629 ADAMTS12P58397 1594 aa22.89■■□□□ 1.25
CACNA1D-215ENST00000636629 FBLN2P98095 1184 aa22.88■■□□□ 1.25
CACNA1D-215ENST00000636629 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
CACNA1D-215ENST00000636629 CHMP7Q8WUX9 453 aaPredicted RBP22.84■■□□□ 1.25
CACNA1D-215ENST00000636629 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
CACNA1D-215ENST00000636629 CEP162Q5TB80 1403 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms