RNA–Protein interactions for RNA: ENST00000636501.1

SMARCA2-251, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-251ENST00000636501 NISCHQ9Y2I1 1504 aa20.78■□□□□ 0.92
SMARCA2-251ENST00000636501 CCDC180Q9P1Z9 1646 aa18.41■□□□□ 0.54
SMARCA2-251ENST00000636501 ABCC9O60706 1549 aa17.96■□□□□ 0.47
SMARCA2-251ENST00000636501 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
SMARCA2-251ENST00000636501 DCAF8L2P0C7V8 631 aa17.29■□□□□ 0.36
SMARCA2-251ENST00000636501 NACADO15069 1562 aa17.24■□□□□ 0.35
SMARCA2-251ENST00000636501 RB1CC1Q8TDY2 1594 aa17.23■□□□□ 0.35
SMARCA2-251ENST00000636501 MYO15BQ96JP2 1530 aa17.15■□□□□ 0.34
SMARCA2-251ENST00000636501 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
SMARCA2-251ENST00000636501 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
SMARCA2-251ENST00000636501 SCRIBQ14160 1630 aa16.87■□□□□ 0.29
SMARCA2-251ENST00000636501 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.28
SMARCA2-251ENST00000636501 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMARCA2-251ENST00000636501 SHROOM4Q9ULL8 1493 aa16.56■□□□□ 0.24
SMARCA2-251ENST00000636501 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
SMARCA2-251ENST00000636501 EIF4G1Q04637 1599 aaKnown RBP16.32■□□□□ 0.2
SMARCA2-251ENST00000636501 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
SMARCA2-251ENST00000636501 CC2D2AQ9P2K1 1620 aa16.24■□□□□ 0.19
SMARCA2-251ENST00000636501 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
SMARCA2-251ENST00000636501 MROH2BQ7Z745 1585 aa16.08■□□□□ 0.16
SMARCA2-251ENST00000636501 BAZ1AQ9NRL2 1556 aaPredicted RBP16.06■□□□□ 0.16
SMARCA2-251ENST00000636501 ATAD2BQ9ULI0 1458 aa15.99■□□□□ 0.15
SMARCA2-251ENST00000636501 WIZO95785 1651 aa15.93■□□□□ 0.14
SMARCA2-251ENST00000636501 PEG3Q9GZU2 1588 aa15.93■□□□□ 0.14
SMARCA2-251ENST00000636501 NCAPD3P42695 1498 aa15.92■□□□□ 0.14
SMARCA2-251ENST00000636501 SMARCA2P51531 1590 aa15.92■□□□□ 0.14
SMARCA2-251ENST00000636501 RSF1Q96T23 1441 aaPredicted RBP15.9■□□□□ 0.14
SMARCA2-251ENST00000636501 HMGXB3Q12766 1538 aa15.86■□□□□ 0.13
SMARCA2-251ENST00000636501 BAZ1BQ9UIG0 1483 aaKnown RBP15.83■□□□□ 0.12
SMARCA2-251ENST00000636501 TOP2AP11388 1531 aaKnown RBP15.7■□□□□ 0.1
SMARCA2-251ENST00000636501 NESP48681 1621 aa15.61■□□□□ 0.09
SMARCA2-251ENST00000636501 SUPT5HO00267 1087 aaKnown RBP15.58■□□□□ 0.08
SMARCA2-251ENST00000636501 CCDC88BA6NC98 1476 aa15.53■□□□□ 0.08
SMARCA2-251ENST00000636501 LAMC3Q9Y6N6 1575 aa15.48■□□□□ 0.07
SMARCA2-251ENST00000636501 CADPSQ9ULU8 1353 aa15.46■□□□□ 0.07
SMARCA2-251ENST00000636501 KIF21AQ7Z4S6 1674 aa15.43■□□□□ 0.06
SMARCA2-251ENST00000636501 CFTRP13569 1480 aa15.41■□□□□ 0.06
SMARCA2-251ENST00000636501 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
SMARCA2-251ENST00000636501 PRDM2Q13029 1718 aa15.34■□□□□ 0.05
SMARCA2-251ENST00000636501 PDS5BQ9NTI5 1447 aa15.33■□□□□ 0.04
SMARCA2-251ENST00000636501 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
SMARCA2-251ENST00000636501 FANCD2Q9BXW9 1451 aa15.31■□□□□ 0.04
SMARCA2-251ENST00000636501 CEP164Q9UPV0 1460 aa15.26■□□□□ 0.03
SMARCA2-251ENST00000636501 MRC2Q9UBG0 1479 aa15.22■□□□□ 0.03
SMARCA2-251ENST00000636501 URB2Q14146 1524 aaKnown RBP15.2■□□□□ 0.02
SMARCA2-251ENST00000636501 WDR62O43379 1518 aa15.19■□□□□ 0.02
SMARCA2-251ENST00000636501 CUX2O14529 1486 aa15.16■□□□□ 0.02
SMARCA2-251ENST00000636501 TOPBP1Q92547 1522 aa15.1■□□□□ 0.01
SMARCA2-251ENST00000636501 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
SMARCA2-251ENST00000636501 CUX1P39880 1505 aa15.06■□□□□ 0
SMARCA2-251ENST00000636501 ABCC8Q09428 1581 aa15.06■□□□□ 0
SMARCA2-251ENST00000636501 POLA1P09884 1462 aaPredicted RBP14.99□□□□□ -0.01
SMARCA2-251ENST00000636501 SYNJ1O43426 1573 aa14.98□□□□□ -0.01
SMARCA2-251ENST00000636501 FGD5Q6ZNL6 1462 aa14.97□□□□□ -0.01
SMARCA2-251ENST00000636501 RAD54L2Q9Y4B4 1467 aa14.95□□□□□ -0.02
SMARCA2-251ENST00000636501 WRNQ14191 1432 aaPredicted RBP eCLIP14.95□□□□□ -0.02
SMARCA2-251ENST00000636501 TARBP1Q13395 1621 aaKnown RBP14.95□□□□□ -0.02
SMARCA2-251ENST00000636501 BIVM-ERCC5R4GMW8 1640 aa14.95□□□□□ -0.02
SMARCA2-251ENST00000636501 ZNF608Q9ULD9 1512 aaPredicted RBP14.94□□□□□ -0.02
SMARCA2-251ENST00000636501 TOP2BQ02880 1626 aa14.92□□□□□ -0.02
SMARCA2-251ENST00000636501 IFT140Q96RY7 1462 aa14.92□□□□□ -0.02
SMARCA2-251ENST00000636501 SOGA1O94964 1423 aa14.89□□□□□ -0.03
SMARCA2-251ENST00000636501 WDR97A6NE52 1622 aa14.88□□□□□ -0.03
SMARCA2-251ENST00000636501 EIF4G3O43432 1585 aaKnown RBP14.86□□□□□ -0.03
SMARCA2-251ENST00000636501 AQRO60306 1485 aaKnown RBP eCLIP14.84□□□□□ -0.03
SMARCA2-251ENST00000636501 TDRD9Q8NDG6 1382 aaKnown RBP14.82□□□□□ -0.04
SMARCA2-251ENST00000636501 ABCA10Q8WWZ4 1543 aa14.8□□□□□ -0.04
SMARCA2-251ENST00000636501 ABCA5Q8WWZ7 1642 aa14.77□□□□□ -0.04
SMARCA2-251ENST00000636501 PBRM1Q86U86 1689 aa14.74□□□□□ -0.05
SMARCA2-251ENST00000636501 GAPVD1Q14C86 1478 aa14.72□□□□□ -0.05
SMARCA2-251ENST00000636501 SNAPC4Q5SXM2 1469 aa14.7□□□□□ -0.06
SMARCA2-251ENST00000636501 CHD1O14646 1710 aa14.69□□□□□ -0.06
SMARCA2-251ENST00000636501 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
SMARCA2-251ENST00000636501 RUSC2Q8N2Y8 1516 aa14.66□□□□□ -0.06
SMARCA2-251ENST00000636501 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
SMARCA2-251ENST00000636501 CHIC1Q5VXU3 224 aa14.62□□□□□ -0.07
SMARCA2-251ENST00000636501 MAGI1Q96QZ7 1491 aaPredicted RBP14.62□□□□□ -0.07
SMARCA2-251ENST00000636501 ADAMTS12P58397 1594 aa14.61□□□□□ -0.07
SMARCA2-251ENST00000636501 ERICH3Q5RHP9 1530 aa14.6□□□□□ -0.07
SMARCA2-251ENST00000636501 KIF27Q86VH2 1401 aa14.59□□□□□ -0.07
SMARCA2-251ENST00000636501 FBLN2P98095 1184 aa14.58□□□□□ -0.08
SMARCA2-251ENST00000636501 DNAJC5Q9H3Z4 198 aa14.58□□□□□ -0.08
SMARCA2-251ENST00000636501 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
SMARCA2-251ENST00000636501 IGF1RP08069 1367 aa14.57□□□□□ -0.08
SMARCA2-251ENST00000636501 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
SMARCA2-251ENST00000636501 FHAD1B1AJZ9 1412 aa14.53□□□□□ -0.08
SMARCA2-251ENST00000636501 CHMP7Q8WUX9 453 aaPredicted RBP14.53□□□□□ -0.08
SMARCA2-251ENST00000636501 GRIN2AQ12879 1464 aa14.52□□□□□ -0.08
SMARCA2-251ENST00000636501 CEP170Q5SW79 1584 aa14.51□□□□□ -0.09
SMARCA2-251ENST00000636501 CUL7Q14999 1698 aa14.49□□□□□ -0.09
SMARCA2-251ENST00000636501 CLASP1Q7Z460 1538 aa14.49□□□□□ -0.09
SMARCA2-251ENST00000636501 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
SMARCA2-251ENST00000636501 NUP160Q12769 1436 aa14.46□□□□□ -0.09
SMARCA2-251ENST00000636501 FAM9AQ8IZU1 332 aaPredicted RBP14.43□□□□□ -0.1
SMARCA2-251ENST00000636501 RIMBP3CA6NJZ7 1639 aa14.41□□□□□ -0.1
SMARCA2-251ENST00000636501 RIMBP3BA6NNM3 1639 aa14.41□□□□□ -0.1
SMARCA2-251ENST00000636501 RIMBP3Q9UFD9 1639 aa14.41□□□□□ -0.1
SMARCA2-251ENST00000636501 PRXQ9BXM0 1461 aa14.39□□□□□ -0.11
SMARCA2-251ENST00000636501 ERCC6L2Q5T890 1561 aa14.39□□□□□ -0.11
SMARCA2-251ENST00000636501 ARHGEF11O15085 1522 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms