RNA–Protein interactions for RNA: ENST00000636473.1

CACNA1A-226, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-226ENST00000636473 NISCHQ9Y2I1 1504 aa39.81■■■■□ 3.96
CACNA1A-226ENST00000636473 CCDC180Q9P1Z9 1646 aa35.12■■■■□ 3.21
CACNA1A-226ENST00000636473 ABCC9O60706 1549 aa33.94■■■■□ 3.02
CACNA1A-226ENST00000636473 ZCCHC6Q5VYS8 1495 aaKnown RBP33.27■■■□□ 2.92
CACNA1A-226ENST00000636473 DCAF8L2P0C7V8 631 aa33.13■■■□□ 2.89
CACNA1A-226ENST00000636473 DCAF1Q9Y4B6 1507 aa32.92■■■□□ 2.86
CACNA1A-226ENST00000636473 NACADO15069 1562 aa32.9■■■□□ 2.86
CACNA1A-226ENST00000636473 MYO15BQ96JP2 1530 aa32.85■■■□□ 2.85
CACNA1A-226ENST00000636473 RB1CC1Q8TDY2 1594 aa32.83■■■□□ 2.85
CACNA1A-226ENST00000636473 SCRIBQ14160 1630 aa32.16■■■□□ 2.74
CACNA1A-226ENST00000636473 UNC13AQ9UPW8 1703 aa32.11■■■□□ 2.73
CACNA1A-226ENST00000636473 SHROOM4Q9ULL8 1493 aa31.87■■■□□ 2.69
CACNA1A-226ENST00000636473 BICRAQ9NZM4 1560 aa31.83■■■□□ 2.69
CACNA1A-226ENST00000636473 PABPN1Q86U42 306 aaKnown RBP eCLIP31.83■■■□□ 2.69
CACNA1A-226ENST00000636473 CECR2Q9BXF3 1484 aa30.98■■■□□ 2.55
CACNA1A-226ENST00000636473 EIF4G1Q04637 1599 aaKnown RBP30.95■■■□□ 2.54
CACNA1A-226ENST00000636473 BAZ1AQ9NRL2 1556 aaPredicted RBP30.81■■■□□ 2.52
CACNA1A-226ENST00000636473 SMARCA4P51532 1647 aa30.78■■■□□ 2.52
CACNA1A-226ENST00000636473 MROH2BQ7Z745 1585 aa30.72■■■□□ 2.51
CACNA1A-226ENST00000636473 CC2D2AQ9P2K1 1620 aa30.7■■■□□ 2.5
CACNA1A-226ENST00000636473 DNAJC5BQ9UF47 199 aa30.67■■■□□ 2.5
CACNA1A-226ENST00000636473 RSF1Q96T23 1441 aaPredicted RBP30.55■■■□□ 2.48
CACNA1A-226ENST00000636473 ATAD2BQ9ULI0 1458 aa30.48■■■□□ 2.47
CACNA1A-226ENST00000636473 SMARCA2P51531 1590 aa30.45■■■□□ 2.47
CACNA1A-226ENST00000636473 PEG3Q9GZU2 1588 aa30.43■■■□□ 2.46
CACNA1A-226ENST00000636473 WIZO95785 1651 aa30.42■■■□□ 2.46
CACNA1A-226ENST00000636473 NCAPD3P42695 1498 aa30.36■■■□□ 2.45
CACNA1A-226ENST00000636473 BAZ1BQ9UIG0 1483 aaKnown RBP30.27■■■□□ 2.44
CACNA1A-226ENST00000636473 HMGXB3Q12766 1538 aa30.25■■■□□ 2.43
CACNA1A-226ENST00000636473 SUPT5HO00267 1087 aaKnown RBP30.24■■■□□ 2.43
CACNA1A-226ENST00000636473 TOP2AP11388 1531 aaKnown RBP30.1■■■□□ 2.41
CACNA1A-226ENST00000636473 CCDC88BA6NC98 1476 aa29.76■■■□□ 2.35
CACNA1A-226ENST00000636473 NESP48681 1621 aa29.53■■■□□ 2.32
CACNA1A-226ENST00000636473 CADPSQ9ULU8 1353 aa29.53■■■□□ 2.32
CACNA1A-226ENST00000636473 LAMC3Q9Y6N6 1575 aa29.48■■■□□ 2.31
CACNA1A-226ENST00000636473 CFTRP13569 1480 aa29.45■■■□□ 2.31
CACNA1A-226ENST00000636473 PDS5BQ9NTI5 1447 aa29.27■■■□□ 2.28
CACNA1A-226ENST00000636473 PRDM2Q13029 1718 aa29.27■■■□□ 2.28
CACNA1A-226ENST00000636473 ERCC6Q03468 1493 aa29.19■■■□□ 2.26
CACNA1A-226ENST00000636473 FANCD2Q9BXW9 1451 aa29.19■■■□□ 2.26
CACNA1A-226ENST00000636473 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
CACNA1A-226ENST00000636473 CEP164Q9UPV0 1460 aa29.1■■■□□ 2.25
CACNA1A-226ENST00000636473 MRC2Q9UBG0 1479 aa28.94■■■□□ 2.22
CACNA1A-226ENST00000636473 THOC2Q8NI27 1593 aaKnown RBP28.92■■■□□ 2.22
CACNA1A-226ENST00000636473 URB2Q14146 1524 aaKnown RBP28.87■■■□□ 2.21
CACNA1A-226ENST00000636473 ABCC8Q09428 1581 aa28.87■■■□□ 2.21
CACNA1A-226ENST00000636473 WDR62O43379 1518 aa28.82■■■□□ 2.2
CACNA1A-226ENST00000636473 TOPBP1Q92547 1522 aa28.79■■■□□ 2.2
CACNA1A-226ENST00000636473 DNMBPQ6XZF7 1577 aa28.79■■■□□ 2.2
CACNA1A-226ENST00000636473 WRNQ14191 1432 aaPredicted RBP eCLIP28.79■■■□□ 2.2
CACNA1A-226ENST00000636473 CUX1P39880 1505 aa28.78■■■□□ 2.2
CACNA1A-226ENST00000636473 SYNJ1O43426 1573 aa28.7■■■□□ 2.18
CACNA1A-226ENST00000636473 TOP2BQ02880 1626 aa28.66■■■□□ 2.18
CACNA1A-226ENST00000636473 BIVM-ERCC5R4GMW8 1640 aa28.64■■■□□ 2.18
CACNA1A-226ENST00000636473 CUX2O14529 1486 aa28.64■■■□□ 2.18
CACNA1A-226ENST00000636473 FGD5Q6ZNL6 1462 aa28.6■■■□□ 2.17
CACNA1A-226ENST00000636473 POLA1P09884 1462 aaPredicted RBP28.58■■■□□ 2.17
CACNA1A-226ENST00000636473 CHIC1Q5VXU3 224 aa28.51■■■□□ 2.15
CACNA1A-226ENST00000636473 TRIM41Q8WV44 630 aa28.51■■■□□ 2.15
CACNA1A-226ENST00000636473 SOGA1O94964 1423 aa28.48■■■□□ 2.15
CACNA1A-226ENST00000636473 RAD54L2Q9Y4B4 1467 aa28.48■■■□□ 2.15
CACNA1A-226ENST00000636473 IFT140Q96RY7 1462 aa28.46■■■□□ 2.15
CACNA1A-226ENST00000636473 TARBP1Q13395 1621 aaKnown RBP28.42■■■□□ 2.14
CACNA1A-226ENST00000636473 ABCA10Q8WWZ4 1543 aa28.33■■■□□ 2.13
CACNA1A-226ENST00000636473 ZNF608Q9ULD9 1512 aaPredicted RBP28.32■■■□□ 2.12
CACNA1A-226ENST00000636473 WDR97A6NE52 1622 aa28.32■■■□□ 2.12
CACNA1A-226ENST00000636473 TDRD9Q8NDG6 1382 aaKnown RBP28.28■■■□□ 2.12
CACNA1A-226ENST00000636473 AQRO60306 1485 aaKnown RBP eCLIP28.24■■■□□ 2.11
CACNA1A-226ENST00000636473 EIF4G3O43432 1585 aaKnown RBP28.22■■■□□ 2.11
CACNA1A-226ENST00000636473 ABCA5Q8WWZ7 1642 aa28.17■■■□□ 2.1
CACNA1A-226ENST00000636473 GAPVD1Q14C86 1478 aa28.16■■■□□ 2.1
CACNA1A-226ENST00000636473 KIF27Q86VH2 1401 aa28.13■■■□□ 2.09
CACNA1A-226ENST00000636473 RUSC2Q8N2Y8 1516 aa28.09■■■□□ 2.09
CACNA1A-226ENST00000636473 GRIN2BQ13224 1484 aa28.07■■■□□ 2.08
CACNA1A-226ENST00000636473 PBRM1Q86U86 1689 aa28.07■■■□□ 2.08
CACNA1A-226ENST00000636473 ERICH3Q5RHP9 1530 aa27.99■■■□□ 2.07
CACNA1A-226ENST00000636473 SNAPC4Q5SXM2 1469 aa27.98■■■□□ 2.07
CACNA1A-226ENST00000636473 IGF1RP08069 1367 aa27.96■■■□□ 2.07
CACNA1A-226ENST00000636473 FAM9AQ8IZU1 332 aaPredicted RBP27.95■■■□□ 2.07
CACNA1A-226ENST00000636473 EEA1Q15075 1411 aa27.93■■■□□ 2.06
CACNA1A-226ENST00000636473 MAGI1Q96QZ7 1491 aaPredicted RBP27.92■■■□□ 2.06
CACNA1A-226ENST00000636473 ADAMTS12P58397 1594 aa27.86■■■□□ 2.05
CACNA1A-226ENST00000636473 CSRNP3Q8WYN3 585 aa27.85■■■□□ 2.05
CACNA1A-226ENST00000636473 CUL7Q14999 1698 aa27.84■■■□□ 2.05
CACNA1A-226ENST00000636473 FHAD1B1AJZ9 1412 aa27.84■■■□□ 2.05
CACNA1A-226ENST00000636473 FBLN2P98095 1184 aa27.82■■■□□ 2.04
CACNA1A-226ENST00000636473 SYNJ2O15056 1496 aa27.82■■■□□ 2.04
CACNA1A-226ENST00000636473 CARMIL1Q5VZK9 1371 aa27.82■■■□□ 2.04
CACNA1A-226ENST00000636473 CHMP7Q8WUX9 453 aaPredicted RBP27.8■■■□□ 2.04
CACNA1A-226ENST00000636473 CHD1O14646 1710 aa27.77■■■□□ 2.04
CACNA1A-226ENST00000636473 PRXQ9BXM0 1461 aa27.73■■■□□ 2.03
CACNA1A-226ENST00000636473 GRIN2AQ12879 1464 aa27.71■■■□□ 2.03
CACNA1A-226ENST00000636473 RAPGEF2Q9Y4G8 1499 aa27.7■■■□□ 2.03
CACNA1A-226ENST00000636473 KIF21BO75037 1637 aa27.62■■■□□ 2.01
CACNA1A-226ENST00000636473 OSCARQ8IYS5 282 aa27.59■■■□□ 2.01
CACNA1A-226ENST00000636473 EHMT2Q96KQ7 1210 aa27.59■■■□□ 2.01
CACNA1A-226ENST00000636473 CEP170Q5SW79 1584 aa27.57■■■□□ 2
CACNA1A-226ENST00000636473 NUP160Q12769 1436 aa27.56■■■□□ 2
CACNA1A-226ENST00000636473 GOLGA3Q08378 1498 aa27.51■■□□□ 1.99
CACNA1A-226ENST00000636473 CLASP1Q7Z460 1538 aa27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms