RNA–Protein interactions for RNA: ENST00000636419.1

CLCN2-212, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-212ENST00000636419 NISCHQ9Y2I1 1504 aa19.44■□□□□ 0.7
CLCN2-212ENST00000636419 CCDC180Q9P1Z9 1646 aa17.06■□□□□ 0.32
CLCN2-212ENST00000636419 ZCCHC6Q5VYS8 1495 aaKnown RBP16.33■□□□□ 0.2
CLCN2-212ENST00000636419 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.17
CLCN2-212ENST00000636419 ABCC9O60706 1549 aa16.13■□□□□ 0.17
CLCN2-212ENST00000636419 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
CLCN2-212ENST00000636419 DCAF8L2P0C7V8 631 aa15.97■□□□□ 0.15
CLCN2-212ENST00000636419 NACADO15069 1562 aa15.91■□□□□ 0.14
CLCN2-212ENST00000636419 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
CLCN2-212ENST00000636419 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
CLCN2-212ENST00000636419 SCRIBQ14160 1630 aa15.58■□□□□ 0.09
CLCN2-212ENST00000636419 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
CLCN2-212ENST00000636419 BICRAQ9NZM4 1560 aa15.26■□□□□ 0.03
CLCN2-212ENST00000636419 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
CLCN2-212ENST00000636419 CECR2Q9BXF3 1484 aa15.06■□□□□ 0
CLCN2-212ENST00000636419 BAZ1AQ9NRL2 1556 aaPredicted RBP15.04■□□□□ -0
CLCN2-212ENST00000636419 SUPT5HO00267 1087 aaKnown RBP15.02■□□□□ -0
CLCN2-212ENST00000636419 RSF1Q96T23 1441 aaPredicted RBP15.01□□□□□ -0.01
CLCN2-212ENST00000636419 MROH2BQ7Z745 1585 aa14.98□□□□□ -0.01
CLCN2-212ENST00000636419 SMARCA4P51532 1647 aa14.97□□□□□ -0.01
CLCN2-212ENST00000636419 WIZO95785 1651 aa14.84□□□□□ -0.03
CLCN2-212ENST00000636419 EIF4G1Q04637 1599 aaKnown RBP14.83□□□□□ -0.04
CLCN2-212ENST00000636419 PEG3Q9GZU2 1588 aa14.82□□□□□ -0.04
CLCN2-212ENST00000636419 SMARCA2P51531 1590 aa14.77□□□□□ -0.04
CLCN2-212ENST00000636419 TOP2AP11388 1531 aaKnown RBP14.75□□□□□ -0.05
CLCN2-212ENST00000636419 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
CLCN2-212ENST00000636419 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
CLCN2-212ENST00000636419 BAZ1BQ9UIG0 1483 aaKnown RBP14.66□□□□□ -0.06
CLCN2-212ENST00000636419 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
CLCN2-212ENST00000636419 CC2D2AQ9P2K1 1620 aa14.63□□□□□ -0.07
CLCN2-212ENST00000636419 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
CLCN2-212ENST00000636419 CHIC1Q5VXU3 224 aa14.35□□□□□ -0.11
CLCN2-212ENST00000636419 CFTRP13569 1480 aa14.3□□□□□ -0.12
CLCN2-212ENST00000636419 CADPSQ9ULU8 1353 aa14.26□□□□□ -0.13
CLCN2-212ENST00000636419 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
CLCN2-212ENST00000636419 PRDM2Q13029 1718 aa14.22□□□□□ -0.13
CLCN2-212ENST00000636419 LAMC3Q9Y6N6 1575 aa14.19□□□□□ -0.14
CLCN2-212ENST00000636419 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
CLCN2-212ENST00000636419 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
CLCN2-212ENST00000636419 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
CLCN2-212ENST00000636419 NESP48681 1621 aa14.11□□□□□ -0.15
CLCN2-212ENST00000636419 FANCD2Q9BXW9 1451 aa14.1□□□□□ -0.15
CLCN2-212ENST00000636419 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.15
CLCN2-212ENST00000636419 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
CLCN2-212ENST00000636419 TOP2BQ02880 1626 aa14.06□□□□□ -0.16
CLCN2-212ENST00000636419 BIVM-ERCC5R4GMW8 1640 aa14.05□□□□□ -0.16
CLCN2-212ENST00000636419 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
CLCN2-212ENST00000636419 CUX1P39880 1505 aa14.03□□□□□ -0.16
CLCN2-212ENST00000636419 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
CLCN2-212ENST00000636419 KIF21AQ7Z4S6 1674 aa13.96□□□□□ -0.17
CLCN2-212ENST00000636419 EEA1Q15075 1411 aa13.95□□□□□ -0.18
CLCN2-212ENST00000636419 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
CLCN2-212ENST00000636419 URB2Q14146 1524 aaKnown RBP13.91□□□□□ -0.18
CLCN2-212ENST00000636419 MRC2Q9UBG0 1479 aa13.91□□□□□ -0.18
CLCN2-212ENST00000636419 FGD5Q6ZNL6 1462 aa13.9□□□□□ -0.18
CLCN2-212ENST00000636419 SOGA1O94964 1423 aa13.89□□□□□ -0.19
CLCN2-212ENST00000636419 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
CLCN2-212ENST00000636419 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
CLCN2-212ENST00000636419 WDR62O43379 1518 aa13.85□□□□□ -0.19
CLCN2-212ENST00000636419 FAM9AQ8IZU1 332 aaPredicted RBP13.84□□□□□ -0.19
CLCN2-212ENST00000636419 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
CLCN2-212ENST00000636419 RUSC2Q8N2Y8 1516 aa13.82□□□□□ -0.2
CLCN2-212ENST00000636419 THOC2Q8NI27 1593 aaKnown RBP13.81□□□□□ -0.2
CLCN2-212ENST00000636419 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
CLCN2-212ENST00000636419 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
CLCN2-212ENST00000636419 CUX2O14529 1486 aa13.79□□□□□ -0.2
CLCN2-212ENST00000636419 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.21
CLCN2-212ENST00000636419 WDR97A6NE52 1622 aa13.76□□□□□ -0.21
CLCN2-212ENST00000636419 KIF21BO75037 1637 aa13.74□□□□□ -0.21
CLCN2-212ENST00000636419 TARBP1Q13395 1621 aaKnown RBP13.73□□□□□ -0.21
CLCN2-212ENST00000636419 LOC105371045A0A1W2PR82 267 aa13.73□□□□□ -0.21
CLCN2-212ENST00000636419 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
CLCN2-212ENST00000636419 GOLGA3Q08378 1498 aa13.72□□□□□ -0.21
CLCN2-212ENST00000636419 ABCA5Q8WWZ7 1642 aa13.7□□□□□ -0.22
CLCN2-212ENST00000636419 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
CLCN2-212ENST00000636419 ERICH3Q5RHP9 1530 aa13.69□□□□□ -0.22
CLCN2-212ENST00000636419 IGF1RP08069 1367 aa13.67□□□□□ -0.22
CLCN2-212ENST00000636419 GAPVD1Q14C86 1478 aa13.66□□□□□ -0.22
CLCN2-212ENST00000636419 TNIKQ9UKE5 1360 aa13.64□□□□□ -0.23
CLCN2-212ENST00000636419 CUL7Q14999 1698 aa13.63□□□□□ -0.23
CLCN2-212ENST00000636419 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
CLCN2-212ENST00000636419 TDRD9Q8NDG6 1382 aaKnown RBP13.63□□□□□ -0.23
CLCN2-212ENST00000636419 CARMIL1Q5VZK9 1371 aa13.61□□□□□ -0.23
CLCN2-212ENST00000636419 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
CLCN2-212ENST00000636419 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
CLCN2-212ENST00000636419 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
CLCN2-212ENST00000636419 UBTFP17480 764 aaKnown RBP13.58□□□□□ -0.24
CLCN2-212ENST00000636419 AQRO60306 1485 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLCN2-212ENST00000636419 PBRM1Q86U86 1689 aa13.58□□□□□ -0.24
CLCN2-212ENST00000636419 EIF4G3O43432 1585 aaKnown RBP13.58□□□□□ -0.24
CLCN2-212ENST00000636419 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
CLCN2-212ENST00000636419 FHAD1B1AJZ9 1412 aa13.53□□□□□ -0.24
CLCN2-212ENST00000636419 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
CLCN2-212ENST00000636419 MAGI1Q96QZ7 1491 aaPredicted RBP13.5□□□□□ -0.25
CLCN2-212ENST00000636419 SNAPC4Q5SXM2 1469 aa13.49□□□□□ -0.25
CLCN2-212ENST00000636419 CLIP1P30622 1438 aa13.46□□□□□ -0.26
CLCN2-212ENST00000636419 SYNJ2O15056 1496 aa13.43□□□□□ -0.26
CLCN2-212ENST00000636419 CTTNBP2Q8WZ74 1663 aa13.43□□□□□ -0.26
CLCN2-212ENST00000636419 GRIN2AQ12879 1464 aa13.41□□□□□ -0.26
CLCN2-212ENST00000636419 EFCAB5A4FU69 1503 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms