RNA–Protein interactions for RNA: ENST00000636298.1

NRXN1-246, Transcript of neurexin 1, humanhuman

TSL 5

Gene NRXN1, Length 3,010 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-246ENST00000636298 NISCHQ9Y2I1 1504 aa14.2□□□□□ -0.14
NRXN1-246ENST00000636298 DCAF8L2P0C7V8 631 aa12.45□□□□□ -0.42
NRXN1-246ENST00000636298 SHROOM4Q9ULL8 1493 aa12.29□□□□□ -0.44
NRXN1-246ENST00000636298 CCDC180Q9P1Z9 1646 aa12.12□□□□□ -0.47
NRXN1-246ENST00000636298 ABCC9O60706 1549 aa12.01□□□□□ -0.49
NRXN1-246ENST00000636298 ZCCHC6Q5VYS8 1495 aaKnown RBP11.89□□□□□ -0.51
NRXN1-246ENST00000636298 SUPT5HO00267 1087 aaKnown RBP11.83□□□□□ -0.52
NRXN1-246ENST00000636298 SCRIBQ14160 1630 aa11.64□□□□□ -0.55
NRXN1-246ENST00000636298 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
NRXN1-246ENST00000636298 DCAF1Q9Y4B6 1507 aa11.42□□□□□ -0.58
NRXN1-246ENST00000636298 NACADO15069 1562 aa11.35□□□□□ -0.59
NRXN1-246ENST00000636298 RB1CC1Q8TDY2 1594 aa11.34□□□□□ -0.59
NRXN1-246ENST00000636298 CECR2Q9BXF3 1484 aa11.28□□□□□ -0.6
NRXN1-246ENST00000636298 UNC13AQ9UPW8 1703 aa11.22□□□□□ -0.61
NRXN1-246ENST00000636298 MYO15BQ96JP2 1530 aa11.18□□□□□ -0.62
NRXN1-246ENST00000636298 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
NRXN1-246ENST00000636298 RSF1Q96T23 1441 aaPredicted RBP11.14□□□□□ -0.63
NRXN1-246ENST00000636298 MROH2BQ7Z745 1585 aa11.13□□□□□ -0.63
NRXN1-246ENST00000636298 WIZO95785 1651 aa11.08□□□□□ -0.63
NRXN1-246ENST00000636298 BICRAQ9NZM4 1560 aa11.06□□□□□ -0.64
NRXN1-246ENST00000636298 CHIC1Q5VXU3 224 aa11.05□□□□□ -0.64
NRXN1-246ENST00000636298 FAM9AQ8IZU1 332 aaPredicted RBP11.03□□□□□ -0.64
NRXN1-246ENST00000636298 SMARCA4P51532 1647 aa10.92□□□□□ -0.66
NRXN1-246ENST00000636298 BAZ1AQ9NRL2 1556 aaPredicted RBP10.92□□□□□ -0.66
NRXN1-246ENST00000636298 LOC105371045A0A1W2PR82 267 aa10.91□□□□□ -0.66
NRXN1-246ENST00000636298 TRIM41Q8WV44 630 aa10.89□□□□□ -0.67
NRXN1-246ENST00000636298 DNAJC5BQ9UF47 199 aa10.8□□□□□ -0.68
NRXN1-246ENST00000636298 CCDC88BA6NC98 1476 aa10.8□□□□□ -0.68
NRXN1-246ENST00000636298 EIF4G1Q04637 1599 aaKnown RBP10.77□□□□□ -0.69
NRXN1-246ENST00000636298 ABCC8Q09428 1581 aa10.77□□□□□ -0.69
NRXN1-246ENST00000636298 BAZ1BQ9UIG0 1483 aaKnown RBP10.77□□□□□ -0.69
NRXN1-246ENST00000636298 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
NRXN1-246ENST00000636298 TOP2AP11388 1531 aaKnown RBP10.74□□□□□ -0.69
NRXN1-246ENST00000636298 SMARCA2P51531 1590 aa10.72□□□□□ -0.69
NRXN1-246ENST00000636298 RANGAP1P46060 587 aaPredicted RBP10.7□□□□□ -0.7
NRXN1-246ENST00000636298 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
NRXN1-246ENST00000636298 PPARGC1BQ86YN6 1023 aaKnown RBP10.65□□□□□ -0.7
NRXN1-246ENST00000636298 TTBK1Q5TCY1 1321 aaPredicted RBP10.65□□□□□ -0.71
NRXN1-246ENST00000636298 SOGA1O94964 1423 aa10.56□□□□□ -0.72
NRXN1-246ENST00000636298 RUSC2Q8N2Y8 1516 aa10.56□□□□□ -0.72
NRXN1-246ENST00000636298 PEG3Q9GZU2 1588 aa10.56□□□□□ -0.72
NRXN1-246ENST00000636298 NESP48681 1621 aa10.55□□□□□ -0.72
NRXN1-246ENST00000636298 NCAPD3P42695 1498 aa10.53□□□□□ -0.72
NRXN1-246ENST00000636298 WRNQ14191 1432 aaPredicted RBP eCLIP10.51□□□□□ -0.73
NRXN1-246ENST00000636298 UBTFP17480 764 aaKnown RBP10.51□□□□□ -0.73
NRXN1-246ENST00000636298 SYNJ1O43426 1573 aa10.49□□□□□ -0.73
NRXN1-246ENST00000636298 PCGF6Q9BYE7 350 aa10.47□□□□□ -0.73
NRXN1-246ENST00000636298 HMGXB3Q12766 1538 aa10.46□□□□□ -0.73
NRXN1-246ENST00000636298 CADPSQ9ULU8 1353 aa10.4□□□□□ -0.74
NRXN1-246ENST00000636298 CSRNP3Q8WYN3 585 aa10.4□□□□□ -0.74
NRXN1-246ENST00000636298 CFTRP13569 1480 aa10.37□□□□□ -0.75
NRXN1-246ENST00000636298 CUX1P39880 1505 aa10.36□□□□□ -0.75
NRXN1-246ENST00000636298 FANCD2Q9BXW9 1451 aa10.35□□□□□ -0.75
NRXN1-246ENST00000636298 RAD54L2Q9Y4B4 1467 aa10.32□□□□□ -0.76
NRXN1-246ENST00000636298 P3H3Q8IVL6 736 aa10.3□□□□□ -0.76
NRXN1-246ENST00000636298 CUX2O14529 1486 aa10.29□□□□□ -0.76
NRXN1-246ENST00000636298 RAPGEF2Q9Y4G8 1499 aa10.29□□□□□ -0.76
NRXN1-246ENST00000636298 FGD5Q6ZNL6 1462 aa10.28□□□□□ -0.76
NRXN1-246ENST00000636298 TOP2BQ02880 1626 aa10.28□□□□□ -0.76
NRXN1-246ENST00000636298 TDRD9Q8NDG6 1382 aaKnown RBP10.28□□□□□ -0.76
NRXN1-246ENST00000636298 ATP1B4Q9UN42 357 aaPredicted RBP10.26□□□□□ -0.77
NRXN1-246ENST00000636298 KIF21AQ7Z4S6 1674 aa10.26□□□□□ -0.77
NRXN1-246ENST00000636298 CEP162Q5TB80 1403 aa10.25□□□□□ -0.77
NRXN1-246ENST00000636298 CEP164Q9UPV0 1460 aa10.25□□□□□ -0.77
NRXN1-246ENST00000636298 ERCC6Q03468 1493 aa10.23□□□□□ -0.77
NRXN1-246ENST00000636298 URB2Q14146 1524 aaKnown RBP10.22□□□□□ -0.77
NRXN1-246ENST00000636298 FBLN2P98095 1184 aa10.22□□□□□ -0.77
NRXN1-246ENST00000636298 TOPBP1Q92547 1522 aa10.21□□□□□ -0.78
NRXN1-246ENST00000636298 BIVM-ERCC5R4GMW8 1640 aa10.2□□□□□ -0.78
NRXN1-246ENST00000636298 ARID3CA6NKF2 412 aa10.2□□□□□ -0.78
NRXN1-246ENST00000636298 POLA1P09884 1462 aaPredicted RBP10.2□□□□□ -0.78
NRXN1-246ENST00000636298 GOLGA3Q08378 1498 aa10.2□□□□□ -0.78
NRXN1-246ENST00000636298 KIF27Q86VH2 1401 aa10.19□□□□□ -0.78
NRXN1-246ENST00000636298 PDS5BQ9NTI5 1447 aa10.19□□□□□ -0.78
NRXN1-246ENST00000636298 PRDM2Q13029 1718 aa10.18□□□□□ -0.78
NRXN1-246ENST00000636298 LAMC3Q9Y6N6 1575 aa10.16□□□□□ -0.78
NRXN1-246ENST00000636298 AQRO60306 1485 aaKnown RBP eCLIP10.16□□□□□ -0.78
NRXN1-246ENST00000636298 CLIP1P30622 1438 aa10.15□□□□□ -0.78
NRXN1-246ENST00000636298 IGF1RP08069 1367 aa10.14□□□□□ -0.79
NRXN1-246ENST00000636298 TNIKQ9UKE5 1360 aa10.13□□□□□ -0.79
NRXN1-246ENST00000636298 EEA1Q15075 1411 aa10.13□□□□□ -0.79
NRXN1-246ENST00000636298 TRIM26Q12899 539 aaPredicted RBP10.13□□□□□ -0.79
NRXN1-246ENST00000636298 DNMBPQ6XZF7 1577 aa10.13□□□□□ -0.79
NRXN1-246ENST00000636298 CARMIL1Q5VZK9 1371 aa10.12□□□□□ -0.79
NRXN1-246ENST00000636298 ZNF608Q9ULD9 1512 aaPredicted RBP10.11□□□□□ -0.79
NRXN1-246ENST00000636298 APLP2Q06481 763 aa10.1□□□□□ -0.79
NRXN1-246ENST00000636298 ITGAEP38570 1179 aa10.09□□□□□ -0.79
NRXN1-246ENST00000636298 HNRNPUL2Q1KMD3 747 aaKnown RBP10.09□□□□□ -0.79
NRXN1-246ENST00000636298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.07□□□□□ -0.8
NRXN1-246ENST00000636298 KIF21BO75037 1637 aa10.07□□□□□ -0.8
NRXN1-246ENST00000636298 PRXQ9BXM0 1461 aa10.07□□□□□ -0.8
NRXN1-246ENST00000636298 GAPVD1Q14C86 1478 aa10.05□□□□□ -0.8
NRXN1-246ENST00000636298 MRC2Q9UBG0 1479 aa10.05□□□□□ -0.8
NRXN1-246ENST00000636298 KANK4Q5T7N3 995 aaPredicted RBP10.04□□□□□ -0.8
NRXN1-246ENST00000636298 ARAP1Q96P48 1450 aa10.03□□□□□ -0.8
NRXN1-246ENST00000636298 ABCA10Q8WWZ4 1543 aa10.02□□□□□ -0.81
NRXN1-246ENST00000636298 FHOD3Q2V2M9 1422 aa10.02□□□□□ -0.81
NRXN1-246ENST00000636298 CHMP7Q8WUX9 453 aaPredicted RBP10□□□□□ -0.81
NRXN1-246ENST00000636298 ARHGAP35Q9NRY4 1499 aa9.98□□□□□ -0.81
NRXN1-246ENST00000636298 TARBP1Q13395 1621 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 223.4 ms