RNA–Protein interactions for RNA: ENST00000635916.1

GABRA1-212, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 923 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-212ENST00000635916 AEBP2Q6ZN18 517 aaPredicted RBP19.9■□□□□ 0.78
GABRA1-212ENST00000635916 NISCHQ9Y2I1 1504 aa19.14■□□□□ 0.65
GABRA1-212ENST00000635916 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
GABRA1-212ENST00000635916 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
GABRA1-212ENST00000635916 CCDC180Q9P1Z9 1646 aa17.02■□□□□ 0.31
GABRA1-212ENST00000635916 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
GABRA1-212ENST00000635916 ABCC9O60706 1549 aa16.57■□□□□ 0.24
GABRA1-212ENST00000635916 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
GABRA1-212ENST00000635916 FOXD1Q16676 465 aa15.91■□□□□ 0.14
GABRA1-212ENST00000635916 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
GABRA1-212ENST00000635916 RB1CC1Q8TDY2 1594 aa15.9■□□□□ 0.14
GABRA1-212ENST00000635916 NACADO15069 1562 aa15.87■□□□□ 0.13
GABRA1-212ENST00000635916 UNC13AQ9UPW8 1703 aa15.85■□□□□ 0.13
GABRA1-212ENST00000635916 DCAF1Q9Y4B6 1507 aa15.75■□□□□ 0.11
GABRA1-212ENST00000635916 MYO15BQ96JP2 1530 aa15.73■□□□□ 0.11
GABRA1-212ENST00000635916 SCRIBQ14160 1630 aa15.63■□□□□ 0.09
GABRA1-212ENST00000635916 BICRAQ9NZM4 1560 aa15.54■□□□□ 0.08
GABRA1-212ENST00000635916 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
GABRA1-212ENST00000635916 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
GABRA1-212ENST00000635916 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
GABRA1-212ENST00000635916 EIF4G1Q04637 1599 aaKnown RBP15.06■□□□□ 0
GABRA1-212ENST00000635916 MSH5O43196 834 aa15.05■□□□□ -0
GABRA1-212ENST00000635916 POTEDQ86YR6 584 aa15.02■□□□□ -0
GABRA1-212ENST00000635916 CC2D2AQ9P2K1 1620 aa15.01□□□□□ -0.01
GABRA1-212ENST00000635916 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
GABRA1-212ENST00000635916 SMARCA4P51532 1647 aa14.91□□□□□ -0.02
GABRA1-212ENST00000635916 PLPPR3Q6T4P5 718 aa14.9□□□□□ -0.02
GABRA1-212ENST00000635916 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
GABRA1-212ENST00000635916 MROH2BQ7Z745 1585 aa14.83□□□□□ -0.04
GABRA1-212ENST00000635916 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
GABRA1-212ENST00000635916 WIZO95785 1651 aa14.75□□□□□ -0.05
GABRA1-212ENST00000635916 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
GABRA1-212ENST00000635916 PPP6R1Q9UPN7 881 aa14.67□□□□□ -0.06
GABRA1-212ENST00000635916 PEG3Q9GZU2 1588 aa14.67□□□□□ -0.06
GABRA1-212ENST00000635916 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
GABRA1-212ENST00000635916 ADRA2BP18089 450 aa14.65□□□□□ -0.06
GABRA1-212ENST00000635916 HMGXB3Q12766 1538 aa14.62□□□□□ -0.07
GABRA1-212ENST00000635916 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
GABRA1-212ENST00000635916 NCAPD3P42695 1498 aa14.61□□□□□ -0.07
GABRA1-212ENST00000635916 BAZ1BQ9UIG0 1483 aaKnown RBP14.59□□□□□ -0.07
GABRA1-212ENST00000635916 TOP2AP11388 1531 aaKnown RBP14.48□□□□□ -0.09
GABRA1-212ENST00000635916 NESP48681 1621 aa14.42□□□□□ -0.1
GABRA1-212ENST00000635916 KIF21AQ7Z4S6 1674 aa14.34□□□□□ -0.11
GABRA1-212ENST00000635916 SUPT5HO00267 1087 aaKnown RBP14.34□□□□□ -0.11
GABRA1-212ENST00000635916 PRDM2Q13029 1718 aa14.3□□□□□ -0.12
GABRA1-212ENST00000635916 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
GABRA1-212ENST00000635916 LAMC3Q9Y6N6 1575 aa14.27□□□□□ -0.12
GABRA1-212ENST00000635916 CADPSQ9ULU8 1353 aa14.19□□□□□ -0.14
GABRA1-212ENST00000635916 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
GABRA1-212ENST00000635916 THOC2Q8NI27 1593 aaKnown RBP14.18□□□□□ -0.14
GABRA1-212ENST00000635916 CFTRP13569 1480 aa14.16□□□□□ -0.14
GABRA1-212ENST00000635916 FANCD2Q9BXW9 1451 aa14.1□□□□□ -0.15
GABRA1-212ENST00000635916 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
GABRA1-212ENST00000635916 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
GABRA1-212ENST00000635916 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.16
GABRA1-212ENST00000635916 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.16
GABRA1-212ENST00000635916 WDR62O43379 1518 aa14□□□□□ -0.17
GABRA1-212ENST00000635916 CUX2O14529 1486 aa13.94□□□□□ -0.18
GABRA1-212ENST00000635916 ABCC8Q09428 1581 aa13.94□□□□□ -0.18
GABRA1-212ENST00000635916 TOPBP1Q92547 1522 aa13.92□□□□□ -0.18
GABRA1-212ENST00000635916 DNMBPQ6XZF7 1577 aa13.92□□□□□ -0.18
GABRA1-212ENST00000635916 CUX1P39880 1505 aa13.9□□□□□ -0.18
GABRA1-212ENST00000635916 SYNJ1O43426 1573 aa13.87□□□□□ -0.19
GABRA1-212ENST00000635916 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
GABRA1-212ENST00000635916 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
GABRA1-212ENST00000635916 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
GABRA1-212ENST00000635916 POLA1P09884 1462 aaPredicted RBP13.8□□□□□ -0.2
GABRA1-212ENST00000635916 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
GABRA1-212ENST00000635916 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
GABRA1-212ENST00000635916 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
GABRA1-212ENST00000635916 ZNF608Q9ULD9 1512 aaPredicted RBP13.78□□□□□ -0.2
GABRA1-212ENST00000635916 EIF4G3O43432 1585 aaKnown RBP13.76□□□□□ -0.21
GABRA1-212ENST00000635916 WRNQ14191 1432 aaPredicted RBP eCLIP13.74□□□□□ -0.21
GABRA1-212ENST00000635916 IFT140Q96RY7 1462 aa13.72□□□□□ -0.21
GABRA1-212ENST00000635916 PBRM1Q86U86 1689 aa13.71□□□□□ -0.21
GABRA1-212ENST00000635916 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.22
GABRA1-212ENST00000635916 SOGA1O94964 1423 aa13.67□□□□□ -0.22
GABRA1-212ENST00000635916 ABCA5Q8WWZ7 1642 aa13.66□□□□□ -0.22
GABRA1-212ENST00000635916 CHD1O14646 1710 aa13.66□□□□□ -0.22
GABRA1-212ENST00000635916 TDRD9Q8NDG6 1382 aaKnown RBP13.64□□□□□ -0.23
GABRA1-212ENST00000635916 ABCA10Q8WWZ4 1543 aa13.62□□□□□ -0.23
GABRA1-212ENST00000635916 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
GABRA1-212ENST00000635916 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
GABRA1-212ENST00000635916 ADAMTS12P58397 1594 aa13.52□□□□□ -0.25
GABRA1-212ENST00000635916 RUSC2Q8N2Y8 1516 aa13.51□□□□□ -0.25
GABRA1-212ENST00000635916 MAPK8IP2Q13387 824 aaPredicted RBP13.51□□□□□ -0.25
GABRA1-212ENST00000635916 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
GABRA1-212ENST00000635916 SCAF1Q9H7N4 1312 aaKnown RBP13.49□□□□□ -0.25
GABRA1-212ENST00000635916 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
GABRA1-212ENST00000635916 MAGI1Q96QZ7 1491 aaPredicted RBP13.45□□□□□ -0.26
GABRA1-212ENST00000635916 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
GABRA1-212ENST00000635916 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
GABRA1-212ENST00000635916 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
GABRA1-212ENST00000635916 FBLN2P98095 1184 aa13.41□□□□□ -0.26
GABRA1-212ENST00000635916 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
GABRA1-212ENST00000635916 CUL7Q14999 1698 aa13.4□□□□□ -0.26
GABRA1-212ENST00000635916 KIF27Q86VH2 1401 aa13.39□□□□□ -0.27
GABRA1-212ENST00000635916 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
GABRA1-212ENST00000635916 CLASP1Q7Z460 1538 aa13.38□□□□□ -0.27
GABRA1-212ENST00000635916 IGF1RP08069 1367 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms