RNA–Protein interactions for RNA: ENST00000635904.1

CACNB4-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 2,444 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-217ENST00000635904 NISCHQ9Y2I1 1504 aa19.17■□□□□ 0.66
CACNB4-217ENST00000635904 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
CACNB4-217ENST00000635904 ABCC9O60706 1549 aa16.16■□□□□ 0.18
CACNB4-217ENST00000635904 ZCCHC6Q5VYS8 1495 aaKnown RBP16.06■□□□□ 0.16
CACNB4-217ENST00000635904 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
CACNB4-217ENST00000635904 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
CACNB4-217ENST00000635904 MYO15BQ96JP2 1530 aa15.79■□□□□ 0.12
CACNB4-217ENST00000635904 NACADO15069 1562 aa15.76■□□□□ 0.11
CACNB4-217ENST00000635904 RB1CC1Q8TDY2 1594 aa15.68■□□□□ 0.1
CACNB4-217ENST00000635904 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
CACNB4-217ENST00000635904 UNC13AQ9UPW8 1703 aa15.39■□□□□ 0.05
CACNB4-217ENST00000635904 SHROOM4Q9ULL8 1493 aa15.36■□□□□ 0.05
CACNB4-217ENST00000635904 BICRAQ9NZM4 1560 aa15.25■□□□□ 0.03
CACNB4-217ENST00000635904 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
CACNB4-217ENST00000635904 CECR2Q9BXF3 1484 aa14.91□□□□□ -0.02
CACNB4-217ENST00000635904 BAZ1AQ9NRL2 1556 aaPredicted RBP14.82□□□□□ -0.04
CACNB4-217ENST00000635904 EIF4G1Q04637 1599 aaKnown RBP14.8□□□□□ -0.04
CACNB4-217ENST00000635904 SMARCA4P51532 1647 aa14.8□□□□□ -0.04
CACNB4-217ENST00000635904 MROH2BQ7Z745 1585 aa14.79□□□□□ -0.04
CACNB4-217ENST00000635904 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
CACNB4-217ENST00000635904 PEG3Q9GZU2 1588 aa14.65□□□□□ -0.06
CACNB4-217ENST00000635904 WIZO95785 1651 aa14.65□□□□□ -0.06
CACNB4-217ENST00000635904 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
CACNB4-217ENST00000635904 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
CACNB4-217ENST00000635904 SUPT5HO00267 1087 aaKnown RBP14.61□□□□□ -0.07
CACNB4-217ENST00000635904 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
CACNB4-217ENST00000635904 NCAPD3P42695 1498 aa14.55□□□□□ -0.08
CACNB4-217ENST00000635904 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.08
CACNB4-217ENST00000635904 HMGXB3Q12766 1538 aa14.52□□□□□ -0.09
CACNB4-217ENST00000635904 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
CACNB4-217ENST00000635904 TOP2AP11388 1531 aaKnown RBP14.5□□□□□ -0.09
CACNB4-217ENST00000635904 CCDC88BA6NC98 1476 aa14.33□□□□□ -0.12
CACNB4-217ENST00000635904 CFTRP13569 1480 aa14.15□□□□□ -0.14
CACNB4-217ENST00000635904 CADPSQ9ULU8 1353 aa14.14□□□□□ -0.15
CACNB4-217ENST00000635904 NESP48681 1621 aa14.11□□□□□ -0.15
CACNB4-217ENST00000635904 LAMC3Q9Y6N6 1575 aa14.1□□□□□ -0.15
CACNB4-217ENST00000635904 PRDM2Q13029 1718 aa14.07□□□□□ -0.16
CACNB4-217ENST00000635904 FANCD2Q9BXW9 1451 aa13.98□□□□□ -0.17
CACNB4-217ENST00000635904 PDS5BQ9NTI5 1447 aa13.97□□□□□ -0.17
CACNB4-217ENST00000635904 KIF21AQ7Z4S6 1674 aa13.96□□□□□ -0.18
CACNB4-217ENST00000635904 ABCC8Q09428 1581 aa13.94□□□□□ -0.18
CACNB4-217ENST00000635904 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
CACNB4-217ENST00000635904 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
CACNB4-217ENST00000635904 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
CACNB4-217ENST00000635904 CHIC1Q5VXU3 224 aa13.86□□□□□ -0.19
CACNB4-217ENST00000635904 SYNJ1O43426 1573 aa13.85□□□□□ -0.19
CACNB4-217ENST00000635904 CUX1P39880 1505 aa13.85□□□□□ -0.19
CACNB4-217ENST00000635904 AEBP2Q6ZN18 517 aaPredicted RBP13.84□□□□□ -0.19
CACNB4-217ENST00000635904 URB2Q14146 1524 aaKnown RBP13.84□□□□□ -0.19
CACNB4-217ENST00000635904 MRC2Q9UBG0 1479 aa13.82□□□□□ -0.2
CACNB4-217ENST00000635904 THOC2Q8NI27 1593 aaKnown RBP13.82□□□□□ -0.2
CACNB4-217ENST00000635904 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
CACNB4-217ENST00000635904 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
CACNB4-217ENST00000635904 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
CACNB4-217ENST00000635904 TOPBP1Q92547 1522 aa13.81□□□□□ -0.2
CACNB4-217ENST00000635904 WDR62O43379 1518 aa13.79□□□□□ -0.2
CACNB4-217ENST00000635904 TRIM41Q8WV44 630 aa13.76□□□□□ -0.21
CACNB4-217ENST00000635904 FGD5Q6ZNL6 1462 aa13.73□□□□□ -0.21
CACNB4-217ENST00000635904 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
CACNB4-217ENST00000635904 CUX2O14529 1486 aa13.68□□□□□ -0.22
CACNB4-217ENST00000635904 RAD54L2Q9Y4B4 1467 aa13.66□□□□□ -0.22
CACNB4-217ENST00000635904 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
CACNB4-217ENST00000635904 SOGA1O94964 1423 aa13.63□□□□□ -0.23
CACNB4-217ENST00000635904 WDR97A6NE52 1622 aa13.63□□□□□ -0.23
CACNB4-217ENST00000635904 ABCA10Q8WWZ4 1543 aa13.62□□□□□ -0.23
CACNB4-217ENST00000635904 IFT140Q96RY7 1462 aa13.6□□□□□ -0.23
CACNB4-217ENST00000635904 RUSC2Q8N2Y8 1516 aa13.58□□□□□ -0.24
CACNB4-217ENST00000635904 ZNF608Q9ULD9 1512 aaPredicted RBP13.55□□□□□ -0.24
CACNB4-217ENST00000635904 ABCA5Q8WWZ7 1642 aa13.55□□□□□ -0.24
CACNB4-217ENST00000635904 KIF27Q86VH2 1401 aa13.54□□□□□ -0.24
CACNB4-217ENST00000635904 TDRD9Q8NDG6 1382 aaKnown RBP13.54□□□□□ -0.24
CACNB4-217ENST00000635904 EEA1Q15075 1411 aa13.52□□□□□ -0.25
CACNB4-217ENST00000635904 EIF4G3O43432 1585 aaKnown RBP13.51□□□□□ -0.25
CACNB4-217ENST00000635904 AQRO60306 1485 aaKnown RBP eCLIP13.51□□□□□ -0.25
CACNB4-217ENST00000635904 GAPVD1Q14C86 1478 aa13.5□□□□□ -0.25
CACNB4-217ENST00000635904 FAM9AQ8IZU1 332 aaPredicted RBP13.49□□□□□ -0.25
CACNB4-217ENST00000635904 PBRM1Q86U86 1689 aa13.46□□□□□ -0.25
CACNB4-217ENST00000635904 IGF1RP08069 1367 aa13.46□□□□□ -0.26
CACNB4-217ENST00000635904 ERICH3Q5RHP9 1530 aa13.45□□□□□ -0.26
CACNB4-217ENST00000635904 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
CACNB4-217ENST00000635904 GRIN2BQ13224 1484 aa13.44□□□□□ -0.26
CACNB4-217ENST00000635904 PRXQ9BXM0 1461 aa13.41□□□□□ -0.26
CACNB4-217ENST00000635904 CUL7Q14999 1698 aa13.4□□□□□ -0.26
CACNB4-217ENST00000635904 SNAPC4Q5SXM2 1469 aa13.39□□□□□ -0.27
CACNB4-217ENST00000635904 ADAMTS12P58397 1594 aa13.39□□□□□ -0.27
CACNB4-217ENST00000635904 KIF21BO75037 1637 aa13.38□□□□□ -0.27
CACNB4-217ENST00000635904 MAGI1Q96QZ7 1491 aaPredicted RBP13.38□□□□□ -0.27
CACNB4-217ENST00000635904 CARMIL1Q5VZK9 1371 aa13.37□□□□□ -0.27
CACNB4-217ENST00000635904 RAPGEF2Q9Y4G8 1499 aa13.35□□□□□ -0.27
CACNB4-217ENST00000635904 FHAD1B1AJZ9 1412 aa13.35□□□□□ -0.27
CACNB4-217ENST00000635904 SYNJ2O15056 1496 aa13.32□□□□□ -0.28
CACNB4-217ENST00000635904 GOLGA3Q08378 1498 aa13.31□□□□□ -0.28
CACNB4-217ENST00000635904 LOC105371045A0A1W2PR82 267 aa13.3□□□□□ -0.28
CACNB4-217ENST00000635904 EHMT2Q96KQ7 1210 aa13.29□□□□□ -0.28
CACNB4-217ENST00000635904 GRIN2AQ12879 1464 aa13.28□□□□□ -0.28
CACNB4-217ENST00000635904 CHD1O14646 1710 aa13.27□□□□□ -0.28
CACNB4-217ENST00000635904 CHMP7Q8WUX9 453 aaPredicted RBP13.25□□□□□ -0.29
CACNB4-217ENST00000635904 FBLN2P98095 1184 aa13.23□□□□□ -0.29
CACNB4-217ENST00000635904 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
CACNB4-217ENST00000635904 NUP160Q12769 1436 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms