RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 NISCHQ9Y2I1 1504 aa26.96■■□□□ 1.91
UBASH3A-209ENST00000635325 CCDC180Q9P1Z9 1646 aa23.6■■□□□ 1.37
UBASH3A-209ENST00000635325 ZCCHC6Q5VYS8 1495 aaKnown RBP22.65■■□□□ 1.22
UBASH3A-209ENST00000635325 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
UBASH3A-209ENST00000635325 ABCC9O60706 1549 aa22.38■■□□□ 1.17
UBASH3A-209ENST00000635325 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
UBASH3A-209ENST00000635325 DCAF8L2P0C7V8 631 aa22.21■■□□□ 1.15
UBASH3A-209ENST00000635325 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.14
UBASH3A-209ENST00000635325 NACADO15069 1562 aa22.02■■□□□ 1.11
UBASH3A-209ENST00000635325 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
UBASH3A-209ENST00000635325 RB1CC1Q8TDY2 1594 aa21.85■■□□□ 1.09
UBASH3A-209ENST00000635325 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
UBASH3A-209ENST00000635325 UNC13AQ9UPW8 1703 aa21.34■■□□□ 1.01
UBASH3A-209ENST00000635325 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.99
UBASH3A-209ENST00000635325 BICRAQ9NZM4 1560 aa21.18■□□□□ 0.98
UBASH3A-209ENST00000635325 RSF1Q96T23 1441 aaPredicted RBP21.1■□□□□ 0.97
UBASH3A-209ENST00000635325 PABPN1Q86U42 306 aaKnown RBP eCLIP21.05■□□□□ 0.96
UBASH3A-209ENST00000635325 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
UBASH3A-209ENST00000635325 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
UBASH3A-209ENST00000635325 BAZ1AQ9NRL2 1556 aaPredicted RBP20.83■□□□□ 0.93
UBASH3A-209ENST00000635325 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
UBASH3A-209ENST00000635325 WIZO95785 1651 aa20.69■□□□□ 0.9
UBASH3A-209ENST00000635325 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
UBASH3A-209ENST00000635325 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
UBASH3A-209ENST00000635325 LOC105371045A0A1W2PR82 267 aa20.52■□□□□ 0.88
UBASH3A-209ENST00000635325 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
UBASH3A-209ENST00000635325 ATAD2BQ9ULI0 1458 aa20.45■□□□□ 0.86
UBASH3A-209ENST00000635325 SMARCA2P51531 1590 aa20.45■□□□□ 0.86
UBASH3A-209ENST00000635325 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
UBASH3A-209ENST00000635325 BAZ1BQ9UIG0 1483 aaKnown RBP20.32■□□□□ 0.84
UBASH3A-209ENST00000635325 NCAPD3P42695 1498 aa20.31■□□□□ 0.84
UBASH3A-209ENST00000635325 HMGXB3Q12766 1538 aa20.29■□□□□ 0.84
UBASH3A-209ENST00000635325 CCDC88BA6NC98 1476 aa20.28■□□□□ 0.84
UBASH3A-209ENST00000635325 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
UBASH3A-209ENST00000635325 FAM9AQ8IZU1 332 aaPredicted RBP20.26■□□□□ 0.83
UBASH3A-209ENST00000635325 DNAJC5BQ9UF47 199 aa20.14■□□□□ 0.81
UBASH3A-209ENST00000635325 PCGF6Q9BYE7 350 aa20.14■□□□□ 0.81
UBASH3A-209ENST00000635325 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
UBASH3A-209ENST00000635325 EHMT2Q96KQ7 1210 aa20.06■□□□□ 0.8
UBASH3A-209ENST00000635325 HRCP23327 699 aa19.93■□□□□ 0.78
UBASH3A-209ENST00000635325 TRIM26Q12899 539 aaPredicted RBP19.86■□□□□ 0.77
UBASH3A-209ENST00000635325 SOGA1O94964 1423 aa19.85■□□□□ 0.77
UBASH3A-209ENST00000635325 WRNQ14191 1432 aaPredicted RBP eCLIP19.81■□□□□ 0.76
UBASH3A-209ENST00000635325 CFTRP13569 1480 aa19.81■□□□□ 0.76
UBASH3A-209ENST00000635325 CADPSQ9ULU8 1353 aa19.77■□□□□ 0.75
UBASH3A-209ENST00000635325 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
UBASH3A-209ENST00000635325 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
UBASH3A-209ENST00000635325 EEA1Q15075 1411 aa19.7■□□□□ 0.74
UBASH3A-209ENST00000635325 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
UBASH3A-209ENST00000635325 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
UBASH3A-209ENST00000635325 LAMC3Q9Y6N6 1575 aa19.64■□□□□ 0.73
UBASH3A-209ENST00000635325 NESP48681 1621 aa19.6■□□□□ 0.73
UBASH3A-209ENST00000635325 CEP162Q5TB80 1403 aa19.59■□□□□ 0.73
UBASH3A-209ENST00000635325 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
UBASH3A-209ENST00000635325 TNIKQ9UKE5 1360 aa19.59■□□□□ 0.73
UBASH3A-209ENST00000635325 GOLGA3Q08378 1498 aa19.54■□□□□ 0.72
UBASH3A-209ENST00000635325 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
UBASH3A-209ENST00000635325 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
UBASH3A-209ENST00000635325 UBTFP17480 764 aaKnown RBP19.53■□□□□ 0.72
UBASH3A-209ENST00000635325 PDS5BQ9NTI5 1447 aa19.48■□□□□ 0.71
UBASH3A-209ENST00000635325 BIVM-ERCC5R4GMW8 1640 aa19.48■□□□□ 0.71
UBASH3A-209ENST00000635325 CEP164Q9UPV0 1460 aa19.47■□□□□ 0.71
UBASH3A-209ENST00000635325 CUX1P39880 1505 aa19.47■□□□□ 0.71
UBASH3A-209ENST00000635325 KIF21BO75037 1637 aa19.46■□□□□ 0.71
UBASH3A-209ENST00000635325 RAPGEF2Q9Y4G8 1499 aa19.39■□□□□ 0.69
UBASH3A-209ENST00000635325 KIF21AQ7Z4S6 1674 aa19.37■□□□□ 0.69
UBASH3A-209ENST00000635325 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
UBASH3A-209ENST00000635325 TTBK1Q5TCY1 1321 aaPredicted RBP19.33■□□□□ 0.68
UBASH3A-209ENST00000635325 TOPBP1Q92547 1522 aa19.32■□□□□ 0.68
UBASH3A-209ENST00000635325 URB2Q14146 1524 aaKnown RBP19.31■□□□□ 0.68
UBASH3A-209ENST00000635325 CLIP1P30622 1438 aa19.3■□□□□ 0.68
UBASH3A-209ENST00000635325 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
UBASH3A-209ENST00000635325 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
UBASH3A-209ENST00000635325 ZEB1P37275 1124 aaPredicted RBP19.26■□□□□ 0.67
UBASH3A-209ENST00000635325 MRC2Q9UBG0 1479 aa19.25■□□□□ 0.67
UBASH3A-209ENST00000635325 KIF27Q86VH2 1401 aa19.23■□□□□ 0.67
UBASH3A-209ENST00000635325 ERICH3Q5RHP9 1530 aa19.22■□□□□ 0.67
UBASH3A-209ENST00000635325 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
UBASH3A-209ENST00000635325 RANGAP1P46060 587 aaPredicted RBP19.21■□□□□ 0.67
UBASH3A-209ENST00000635325 POLA1P09884 1462 aaPredicted RBP19.21■□□□□ 0.67
UBASH3A-209ENST00000635325 VPS8Q8N3P4 1428 aa19.18■□□□□ 0.66
UBASH3A-209ENST00000635325 WDR62O43379 1518 aa19.16■□□□□ 0.66
UBASH3A-209ENST00000635325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.14■□□□□ 0.65
UBASH3A-209ENST00000635325 THOC2Q8NI27 1593 aaKnown RBP19.13■□□□□ 0.65
UBASH3A-209ENST00000635325 ABCA10Q8WWZ4 1543 aa19.13■□□□□ 0.65
UBASH3A-209ENST00000635325 RAD54L2Q9Y4B4 1467 aa19.12■□□□□ 0.65
UBASH3A-209ENST00000635325 CUX2O14529 1486 aa19.12■□□□□ 0.65
UBASH3A-209ENST00000635325 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
UBASH3A-209ENST00000635325 IGF1RP08069 1367 aa19.06■□□□□ 0.64
UBASH3A-209ENST00000635325 ARAP1Q96P48 1450 aa19.05■□□□□ 0.64
UBASH3A-209ENST00000635325 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
UBASH3A-209ENST00000635325 TARBP1Q13395 1621 aaKnown RBP19.04■□□□□ 0.64
UBASH3A-209ENST00000635325 IFT140Q96RY7 1462 aa19■□□□□ 0.63
UBASH3A-209ENST00000635325 APLP2Q06481 763 aa18.99■□□□□ 0.63
UBASH3A-209ENST00000635325 ABCA5Q8WWZ7 1642 aa18.98■□□□□ 0.63
UBASH3A-209ENST00000635325 CARMIL1Q5VZK9 1371 aa18.95■□□□□ 0.62
UBASH3A-209ENST00000635325 ARHGAP35Q9NRY4 1499 aa18.94■□□□□ 0.62
UBASH3A-209ENST00000635325 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
UBASH3A-209ENST00000635325 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
UBASH3A-209ENST00000635325 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms