RNA–Protein interactions for RNA: ENST00000635226.1

SMARCA2-237, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

Gene SMARCA2, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-237ENST00000635226 NISCHQ9Y2I1 1504 aa28.23■■■□□ 2.11
SMARCA2-237ENST00000635226 ABCC9O60706 1549 aa26.35■■□□□ 1.81
SMARCA2-237ENST00000635226 DNAJC5BQ9UF47 199 aa25.64■■□□□ 1.7
SMARCA2-237ENST00000635226 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
SMARCA2-237ENST00000635226 RB1CC1Q8TDY2 1594 aa24.62■■□□□ 1.53
SMARCA2-237ENST00000635226 PABPN1Q86U42 306 aaKnown RBP eCLIP24.53■■□□□ 1.52
SMARCA2-237ENST00000635226 NACADO15069 1562 aa24.31■■□□□ 1.48
SMARCA2-237ENST00000635226 DCAF8L2P0C7V8 631 aa24.13■■□□□ 1.45
SMARCA2-237ENST00000635226 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
SMARCA2-237ENST00000635226 UNC13AQ9UPW8 1703 aa24.04■■□□□ 1.44
SMARCA2-237ENST00000635226 DNAJC5Q9H3Z4 198 aa23.91■■□□□ 1.42
SMARCA2-237ENST00000635226 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
SMARCA2-237ENST00000635226 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
SMARCA2-237ENST00000635226 CC2D2AQ9P2K1 1620 aa23.71■■□□□ 1.39
SMARCA2-237ENST00000635226 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
SMARCA2-237ENST00000635226 EIF4G1Q04637 1599 aaKnown RBP23.49■■□□□ 1.35
SMARCA2-237ENST00000635226 SCRIBQ14160 1630 aa23.23■■□□□ 1.31
SMARCA2-237ENST00000635226 ZCCHC6Q5VYS8 1495 aaKnown RBP23.23■■□□□ 1.31
SMARCA2-237ENST00000635226 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
SMARCA2-237ENST00000635226 CUX2O14529 1486 aa22.92■■□□□ 1.26
SMARCA2-237ENST00000635226 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
SMARCA2-237ENST00000635226 NCAPD3P42695 1498 aa22.6■■□□□ 1.21
SMARCA2-237ENST00000635226 NESP48681 1621 aa22.5■■□□□ 1.19
SMARCA2-237ENST00000635226 TRIM41Q8WV44 630 aa22.45■■□□□ 1.18
SMARCA2-237ENST00000635226 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
SMARCA2-237ENST00000635226 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
SMARCA2-237ENST00000635226 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
SMARCA2-237ENST00000635226 SMARCA2P51531 1590 aa22.15■■□□□ 1.14
SMARCA2-237ENST00000635226 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
SMARCA2-237ENST00000635226 LAMC3Q9Y6N6 1575 aa22.04■■□□□ 1.12
SMARCA2-237ENST00000635226 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
SMARCA2-237ENST00000635226 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
SMARCA2-237ENST00000635226 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
SMARCA2-237ENST00000635226 PEG3Q9GZU2 1588 aa21.93■■□□□ 1.1
SMARCA2-237ENST00000635226 BAZ1AQ9NRL2 1556 aaPredicted RBP21.86■■□□□ 1.09
SMARCA2-237ENST00000635226 CADPSQ9ULU8 1353 aa21.86■■□□□ 1.09
SMARCA2-237ENST00000635226 MRC2Q9UBG0 1479 aa21.84■■□□□ 1.09
SMARCA2-237ENST00000635226 OSCARQ8IYS5 282 aa21.83■■□□□ 1.09
SMARCA2-237ENST00000635226 WDR62O43379 1518 aa21.83■■□□□ 1.09
SMARCA2-237ENST00000635226 MROH2BQ7Z745 1585 aa21.8■■□□□ 1.08
SMARCA2-237ENST00000635226 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.04
SMARCA2-237ENST00000635226 RIMBP3CA6NJZ7 1639 aa21.56■■□□□ 1.04
SMARCA2-237ENST00000635226 RIMBP3BA6NNM3 1639 aa21.56■■□□□ 1.04
SMARCA2-237ENST00000635226 RIMBP3Q9UFD9 1639 aa21.56■■□□□ 1.04
SMARCA2-237ENST00000635226 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
SMARCA2-237ENST00000635226 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
SMARCA2-237ENST00000635226 ARHGEF11O15085 1522 aa21.46■■□□□ 1.03
SMARCA2-237ENST00000635226 CFTRP13569 1480 aa21.45■■□□□ 1.03
SMARCA2-237ENST00000635226 WIZO95785 1651 aa21.42■■□□□ 1.02
SMARCA2-237ENST00000635226 CYB5RLQ6IPT4 315 aa21.41■■□□□ 1.02
SMARCA2-237ENST00000635226 ZNF608Q9ULD9 1512 aaPredicted RBP21.38■■□□□ 1.01
SMARCA2-237ENST00000635226 TRHP20396 242 aaPredicted RBP21.29■■□□□ 1
SMARCA2-237ENST00000635226 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
SMARCA2-237ENST00000635226 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
SMARCA2-237ENST00000635226 AEBP2Q6ZN18 517 aaPredicted RBP21.12■□□□□ 0.97
SMARCA2-237ENST00000635226 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
SMARCA2-237ENST00000635226 AQRO60306 1485 aaKnown RBP eCLIP21.08■□□□□ 0.97
SMARCA2-237ENST00000635226 TOPBP1Q92547 1522 aa21.08■□□□□ 0.96
SMARCA2-237ENST00000635226 TOP2AP11388 1531 aaKnown RBP21.05■□□□□ 0.96
SMARCA2-237ENST00000635226 EIF4G3O43432 1585 aaKnown RBP21.05■□□□□ 0.96
SMARCA2-237ENST00000635226 FBLN2P98095 1184 aa20.98■□□□□ 0.95
SMARCA2-237ENST00000635226 CHD1O14646 1710 aa20.97■□□□□ 0.95
SMARCA2-237ENST00000635226 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
SMARCA2-237ENST00000635226 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
SMARCA2-237ENST00000635226 ABCC8Q09428 1581 aa20.87■□□□□ 0.93
SMARCA2-237ENST00000635226 CLASP1Q7Z460 1538 aa20.86■□□□□ 0.93
SMARCA2-237ENST00000635226 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
SMARCA2-237ENST00000635226 PRDM2Q13029 1718 aa20.85■□□□□ 0.93
SMARCA2-237ENST00000635226 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
SMARCA2-237ENST00000635226 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.93
SMARCA2-237ENST00000635226 RAD54L2Q9Y4B4 1467 aa20.83■□□□□ 0.93
SMARCA2-237ENST00000635226 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
SMARCA2-237ENST00000635226 SOGA1O94964 1423 aa20.72■□□□□ 0.91
SMARCA2-237ENST00000635226 CHMP7Q8WUX9 453 aaPredicted RBP20.71■□□□□ 0.91
SMARCA2-237ENST00000635226 GAPVD1Q14C86 1478 aa20.68■□□□□ 0.9
SMARCA2-237ENST00000635226 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
SMARCA2-237ENST00000635226 MAGI1Q96QZ7 1491 aaPredicted RBP20.61■□□□□ 0.89
SMARCA2-237ENST00000635226 SYNJ2O15056 1496 aa20.59■□□□□ 0.89
SMARCA2-237ENST00000635226 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
SMARCA2-237ENST00000635226 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
SMARCA2-237ENST00000635226 ERCC6L2Q5T890 1561 aa20.57■□□□□ 0.88
SMARCA2-237ENST00000635226 WDR97A6NE52 1622 aa20.52■□□□□ 0.88
SMARCA2-237ENST00000635226 ILDR1Q86SU0 546 aaPredicted RBP20.51■□□□□ 0.87
SMARCA2-237ENST00000635226 CUX1P39880 1505 aa20.49■□□□□ 0.87
SMARCA2-237ENST00000635226 KDM4FA0A1W2PPD8 638 aa20.45■□□□□ 0.86
SMARCA2-237ENST00000635226 CEP170Q5SW79 1584 aa20.36■□□□□ 0.85
SMARCA2-237ENST00000635226 NUP160Q12769 1436 aa20.34■□□□□ 0.85
SMARCA2-237ENST00000635226 GRIN2AQ12879 1464 aa20.32■□□□□ 0.84
SMARCA2-237ENST00000635226 KIF13AQ9H1H9 1805 aa20.32■□□□□ 0.84
SMARCA2-237ENST00000635226 PBRM1Q86U86 1689 aa20.31■□□□□ 0.84
SMARCA2-237ENST00000635226 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
SMARCA2-237ENST00000635226 ABCA5Q8WWZ7 1642 aa20.3■□□□□ 0.84
SMARCA2-237ENST00000635226 FAM69CQ0P6D2 419 aa20.26■□□□□ 0.83
SMARCA2-237ENST00000635226 SHROOM2Q13796 1616 aa20.26■□□□□ 0.83
SMARCA2-237ENST00000635226 ABCC10Q5T3U5 1492 aa20.24■□□□□ 0.83
SMARCA2-237ENST00000635226 PRG4Q92954 1404 aaPredicted RBP20.18■□□□□ 0.82
SMARCA2-237ENST00000635226 ADAMTS12P58397 1594 aa20.17■□□□□ 0.82
SMARCA2-237ENST00000635226 JPH4Q96JJ6 628 aa20.15■□□□□ 0.82
SMARCA2-237ENST00000635226 FHAD1B1AJZ9 1412 aa20.13■□□□□ 0.81
SMARCA2-237ENST00000635226 DIP2BQ9P265 1576 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms