RNA–Protein interactions for RNA: ENST00000635129.1

SMARCA2-234, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-234ENST00000635129 NISCHQ9Y2I1 1504 aa21.65■■□□□ 1.06
SMARCA2-234ENST00000635129 CCDC180Q9P1Z9 1646 aa18.99■□□□□ 0.63
SMARCA2-234ENST00000635129 ABCC9O60706 1549 aa18.3■□□□□ 0.52
SMARCA2-234ENST00000635129 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
SMARCA2-234ENST00000635129 DCAF8L2P0C7V8 631 aa18.08■□□□□ 0.48
SMARCA2-234ENST00000635129 DCAF1Q9Y4B6 1507 aa17.89■□□□□ 0.45
SMARCA2-234ENST00000635129 NACADO15069 1562 aa17.79■□□□□ 0.44
SMARCA2-234ENST00000635129 MYO15BQ96JP2 1530 aa17.79■□□□□ 0.44
SMARCA2-234ENST00000635129 RB1CC1Q8TDY2 1594 aa17.72■□□□□ 0.43
SMARCA2-234ENST00000635129 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
SMARCA2-234ENST00000635129 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
SMARCA2-234ENST00000635129 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
SMARCA2-234ENST00000635129 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
SMARCA2-234ENST00000635129 BICRAQ9NZM4 1560 aa17.15■□□□□ 0.34
SMARCA2-234ENST00000635129 CECR2Q9BXF3 1484 aa16.86■□□□□ 0.29
SMARCA2-234ENST00000635129 BAZ1AQ9NRL2 1556 aaPredicted RBP16.76■□□□□ 0.27
SMARCA2-234ENST00000635129 SUPT5HO00267 1087 aaKnown RBP16.72■□□□□ 0.27
SMARCA2-234ENST00000635129 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
SMARCA2-234ENST00000635129 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
SMARCA2-234ENST00000635129 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
SMARCA2-234ENST00000635129 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
SMARCA2-234ENST00000635129 WIZO95785 1651 aa16.55■□□□□ 0.24
SMARCA2-234ENST00000635129 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
SMARCA2-234ENST00000635129 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.23
SMARCA2-234ENST00000635129 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
SMARCA2-234ENST00000635129 PEG3Q9GZU2 1588 aa16.49■□□□□ 0.23
SMARCA2-234ENST00000635129 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
SMARCA2-234ENST00000635129 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
SMARCA2-234ENST00000635129 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
SMARCA2-234ENST00000635129 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
SMARCA2-234ENST00000635129 HMGXB3Q12766 1538 aa16.37■□□□□ 0.21
SMARCA2-234ENST00000635129 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
SMARCA2-234ENST00000635129 CADPSQ9ULU8 1353 aa16.02■□□□□ 0.16
SMARCA2-234ENST00000635129 CFTRP13569 1480 aa15.98■□□□□ 0.15
SMARCA2-234ENST00000635129 NESP48681 1621 aa15.95■□□□□ 0.14
SMARCA2-234ENST00000635129 LAMC3Q9Y6N6 1575 aa15.91■□□□□ 0.14
SMARCA2-234ENST00000635129 PDS5BQ9NTI5 1447 aa15.85■□□□□ 0.13
SMARCA2-234ENST00000635129 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
SMARCA2-234ENST00000635129 CHIC1Q5VXU3 224 aa15.81■□□□□ 0.12
SMARCA2-234ENST00000635129 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
SMARCA2-234ENST00000635129 ABCC8Q09428 1581 aa15.78■□□□□ 0.12
SMARCA2-234ENST00000635129 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.11
SMARCA2-234ENST00000635129 ERCC6Q03468 1493 aa15.76■□□□□ 0.11
SMARCA2-234ENST00000635129 WRNQ14191 1432 aaPredicted RBP eCLIP15.75■□□□□ 0.11
SMARCA2-234ENST00000635129 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
SMARCA2-234ENST00000635129 KIF21AQ7Z4S6 1674 aa15.7■□□□□ 0.1
SMARCA2-234ENST00000635129 CUX1P39880 1505 aa15.66■□□□□ 0.1
SMARCA2-234ENST00000635129 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
SMARCA2-234ENST00000635129 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
SMARCA2-234ENST00000635129 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
SMARCA2-234ENST00000635129 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
SMARCA2-234ENST00000635129 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
SMARCA2-234ENST00000635129 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
SMARCA2-234ENST00000635129 BIVM-ERCC5R4GMW8 1640 aa15.57■□□□□ 0.08
SMARCA2-234ENST00000635129 THOC2Q8NI27 1593 aaKnown RBP15.55■□□□□ 0.08
SMARCA2-234ENST00000635129 WDR62O43379 1518 aa15.55■□□□□ 0.08
SMARCA2-234ENST00000635129 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
SMARCA2-234ENST00000635129 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.07
SMARCA2-234ENST00000635129 SOGA1O94964 1423 aa15.49■□□□□ 0.07
SMARCA2-234ENST00000635129 RAD54L2Q9Y4B4 1467 aa15.48■□□□□ 0.07
SMARCA2-234ENST00000635129 FAM9AQ8IZU1 332 aaPredicted RBP15.46■□□□□ 0.07
SMARCA2-234ENST00000635129 CUX2O14529 1486 aa15.43■□□□□ 0.06
SMARCA2-234ENST00000635129 IFT140Q96RY7 1462 aa15.41■□□□□ 0.06
SMARCA2-234ENST00000635129 ABCA10Q8WWZ4 1543 aa15.4■□□□□ 0.06
SMARCA2-234ENST00000635129 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
SMARCA2-234ENST00000635129 KIF27Q86VH2 1401 aa15.39■□□□□ 0.05
SMARCA2-234ENST00000635129 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
SMARCA2-234ENST00000635129 TARBP1Q13395 1621 aaKnown RBP15.36■□□□□ 0.05
SMARCA2-234ENST00000635129 EEA1Q15075 1411 aa15.36■□□□□ 0.05
SMARCA2-234ENST00000635129 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
SMARCA2-234ENST00000635129 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.04
SMARCA2-234ENST00000635129 AQRO60306 1485 aaKnown RBP eCLIP15.31■□□□□ 0.04
SMARCA2-234ENST00000635129 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
SMARCA2-234ENST00000635129 GAPVD1Q14C86 1478 aa15.3■□□□□ 0.04
SMARCA2-234ENST00000635129 AEBP2Q6ZN18 517 aaPredicted RBP15.29■□□□□ 0.04
SMARCA2-234ENST00000635129 IGF1RP08069 1367 aa15.27■□□□□ 0.04
SMARCA2-234ENST00000635129 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
SMARCA2-234ENST00000635129 ABCA5Q8WWZ7 1642 aa15.27■□□□□ 0.03
SMARCA2-234ENST00000635129 EIF4G3O43432 1585 aaKnown RBP15.24■□□□□ 0.03
SMARCA2-234ENST00000635129 GRIN2BQ13224 1484 aa15.23■□□□□ 0.03
SMARCA2-234ENST00000635129 ERICH3Q5RHP9 1530 aa15.21■□□□□ 0.03
SMARCA2-234ENST00000635129 LOC105371045A0A1W2PR82 267 aa15.2■□□□□ 0.02
SMARCA2-234ENST00000635129 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
SMARCA2-234ENST00000635129 PRXQ9BXM0 1461 aa15.18■□□□□ 0.02
SMARCA2-234ENST00000635129 PBRM1Q86U86 1689 aa15.17■□□□□ 0.02
SMARCA2-234ENST00000635129 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
SMARCA2-234ENST00000635129 GOLGA3Q08378 1498 aa15.14■□□□□ 0.01
SMARCA2-234ENST00000635129 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
SMARCA2-234ENST00000635129 KIF21BO75037 1637 aa15.14■□□□□ 0.01
SMARCA2-234ENST00000635129 CUL7Q14999 1698 aa15.14■□□□□ 0.01
SMARCA2-234ENST00000635129 UBTFP17480 764 aaKnown RBP15.14■□□□□ 0.01
SMARCA2-234ENST00000635129 FHAD1B1AJZ9 1412 aa15.14■□□□□ 0.01
SMARCA2-234ENST00000635129 MAGI1Q96QZ7 1491 aaPredicted RBP15.13■□□□□ 0.01
SMARCA2-234ENST00000635129 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
SMARCA2-234ENST00000635129 FBLN2P98095 1184 aa15.11■□□□□ 0.01
SMARCA2-234ENST00000635129 CHMP7Q8WUX9 453 aaPredicted RBP15.11■□□□□ 0.01
SMARCA2-234ENST00000635129 SYNJ2O15056 1496 aa15.08■□□□□ 0
SMARCA2-234ENST00000635129 GRIN2AQ12879 1464 aa15.03■□□□□ -0
SMARCA2-234ENST00000635129 TNIKQ9UKE5 1360 aa15.03■□□□□ -0
SMARCA2-234ENST00000635129 RANGAP1P46060 587 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms