RNA–Protein interactions for RNA: ENST00000634412.1

NRXN1-235, Transcript of neurexin 1, humanhuman

TSL 5

Gene NRXN1, Length 2,249 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-235ENST00000634412 NISCHQ9Y2I1 1504 aa21.89■■□□□ 1.09
NRXN1-235ENST00000634412 AEBP2Q6ZN18 517 aaPredicted RBP19.33■□□□□ 0.68
NRXN1-235ENST00000634412 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
NRXN1-235ENST00000634412 ZCCHC6Q5VYS8 1495 aaKnown RBP18.48■□□□□ 0.55
NRXN1-235ENST00000634412 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
NRXN1-235ENST00000634412 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
NRXN1-235ENST00000634412 SHROOM4Q9ULL8 1493 aa17.98■□□□□ 0.47
NRXN1-235ENST00000634412 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.45
NRXN1-235ENST00000634412 DCAF8L2P0C7V8 631 aa17.8■□□□□ 0.44
NRXN1-235ENST00000634412 NACADO15069 1562 aa17.57■□□□□ 0.4
NRXN1-235ENST00000634412 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
NRXN1-235ENST00000634412 ABCC9O60706 1549 aa17.45■□□□□ 0.38
NRXN1-235ENST00000634412 SCRIBQ14160 1630 aa17.4■□□□□ 0.38
NRXN1-235ENST00000634412 RB1CC1Q8TDY2 1594 aa17.31■□□□□ 0.36
NRXN1-235ENST00000634412 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
NRXN1-235ENST00000634412 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
NRXN1-235ENST00000634412 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
NRXN1-235ENST00000634412 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.3
NRXN1-235ENST00000634412 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.29
NRXN1-235ENST00000634412 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
NRXN1-235ENST00000634412 WIZO95785 1651 aa16.79■□□□□ 0.28
NRXN1-235ENST00000634412 SMARCA4P51532 1647 aa16.76■□□□□ 0.27
NRXN1-235ENST00000634412 BICRAQ9NZM4 1560 aa16.75■□□□□ 0.27
NRXN1-235ENST00000634412 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
NRXN1-235ENST00000634412 PEG3Q9GZU2 1588 aa16.58■□□□□ 0.25
NRXN1-235ENST00000634412 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
NRXN1-235ENST00000634412 SMARCA2P51531 1590 aa16.5■□□□□ 0.23
NRXN1-235ENST00000634412 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
NRXN1-235ENST00000634412 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
NRXN1-235ENST00000634412 CCDC88BA6NC98 1476 aa16.46■□□□□ 0.22
NRXN1-235ENST00000634412 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
NRXN1-235ENST00000634412 ATAD2BQ9ULI0 1458 aa16.36■□□□□ 0.21
NRXN1-235ENST00000634412 LOC105371045A0A1W2PR82 267 aa16.31■□□□□ 0.2
NRXN1-235ENST00000634412 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
NRXN1-235ENST00000634412 HMGXB3Q12766 1538 aa16.22■□□□□ 0.19
NRXN1-235ENST00000634412 ABCC8Q09428 1581 aa16.2■□□□□ 0.18
NRXN1-235ENST00000634412 NCAPD3P42695 1498 aa16.18■□□□□ 0.18
NRXN1-235ENST00000634412 EEA1Q15075 1411 aa16.14■□□□□ 0.17
NRXN1-235ENST00000634412 FAM9AQ8IZU1 332 aaPredicted RBP16.11■□□□□ 0.17
NRXN1-235ENST00000634412 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
NRXN1-235ENST00000634412 SYNJ1O43426 1573 aa16■□□□□ 0.15
NRXN1-235ENST00000634412 PCGF6Q9BYE7 350 aa15.99■□□□□ 0.15
NRXN1-235ENST00000634412 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
NRXN1-235ENST00000634412 PRDM2Q13029 1718 aa15.98■□□□□ 0.15
NRXN1-235ENST00000634412 SOGA1O94964 1423 aa15.97■□□□□ 0.15
NRXN1-235ENST00000634412 TOP2BQ02880 1626 aa15.96■□□□□ 0.15
NRXN1-235ENST00000634412 BIVM-ERCC5R4GMW8 1640 aa15.96■□□□□ 0.15
NRXN1-235ENST00000634412 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
NRXN1-235ENST00000634412 CFTRP13569 1480 aa15.92■□□□□ 0.14
NRXN1-235ENST00000634412 HRCP23327 699 aa15.91■□□□□ 0.14
NRXN1-235ENST00000634412 TNIKQ9UKE5 1360 aa15.9■□□□□ 0.14
NRXN1-235ENST00000634412 KIF21BO75037 1637 aa15.9■□□□□ 0.14
NRXN1-235ENST00000634412 GOLGA3Q08378 1498 aa15.88■□□□□ 0.13
NRXN1-235ENST00000634412 CC2D2AQ9P2K1 1620 aa15.87■□□□□ 0.13
NRXN1-235ENST00000634412 RUSC2Q8N2Y8 1516 aa15.87■□□□□ 0.13
NRXN1-235ENST00000634412 CEP164Q9UPV0 1460 aa15.85■□□□□ 0.13
NRXN1-235ENST00000634412 CEP162Q5TB80 1403 aa15.81■□□□□ 0.12
NRXN1-235ENST00000634412 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
NRXN1-235ENST00000634412 CUX1P39880 1505 aa15.78■□□□□ 0.12
NRXN1-235ENST00000634412 CADPSQ9ULU8 1353 aa15.77■□□□□ 0.11
NRXN1-235ENST00000634412 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
NRXN1-235ENST00000634412 UBTFP17480 764 aaKnown RBP15.71■□□□□ 0.11
NRXN1-235ENST00000634412 KIF27Q86VH2 1401 aa15.67■□□□□ 0.1
NRXN1-235ENST00000634412 PRXQ9BXM0 1461 aa15.66■□□□□ 0.1
NRXN1-235ENST00000634412 RAPGEF2Q9Y4G8 1499 aa15.64■□□□□ 0.09
NRXN1-235ENST00000634412 CLIP1P30622 1438 aa15.61■□□□□ 0.09
NRXN1-235ENST00000634412 ZEB1P37275 1124 aaPredicted RBP15.6■□□□□ 0.09
NRXN1-235ENST00000634412 FOXD1Q16676 465 aa15.6■□□□□ 0.09
NRXN1-235ENST00000634412 LAMC3Q9Y6N6 1575 aa15.6■□□□□ 0.09
NRXN1-235ENST00000634412 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
NRXN1-235ENST00000634412 DNMBPQ6XZF7 1577 aa15.56■□□□□ 0.08
NRXN1-235ENST00000634412 VPS8Q8N3P4 1428 aa15.55■□□□□ 0.08
NRXN1-235ENST00000634412 FGD5Q6ZNL6 1462 aa15.54■□□□□ 0.08
NRXN1-235ENST00000634412 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
NRXN1-235ENST00000634412 CUX2O14529 1486 aa15.5■□□□□ 0.07
NRXN1-235ENST00000634412 TOPBP1Q92547 1522 aa15.47■□□□□ 0.07
NRXN1-235ENST00000634412 IGF1RP08069 1367 aa15.46■□□□□ 0.06
NRXN1-235ENST00000634412 ABCA10Q8WWZ4 1543 aa15.46■□□□□ 0.06
NRXN1-235ENST00000634412 PPARGC1BQ86YN6 1023 aaKnown RBP15.45■□□□□ 0.06
NRXN1-235ENST00000634412 NESP48681 1621 aa15.44■□□□□ 0.06
NRXN1-235ENST00000634412 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
NRXN1-235ENST00000634412 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
NRXN1-235ENST00000634412 ARAP1Q96P48 1450 aa15.41■□□□□ 0.06
NRXN1-235ENST00000634412 WDR97A6NE52 1622 aa15.4■□□□□ 0.06
NRXN1-235ENST00000634412 CARMIL1Q5VZK9 1371 aa15.4■□□□□ 0.06
NRXN1-235ENST00000634412 CUL7Q14999 1698 aa15.4■□□□□ 0.06
NRXN1-235ENST00000634412 APLP2Q06481 763 aa15.38■□□□□ 0.05
NRXN1-235ENST00000634412 URB2Q14146 1524 aaKnown RBP15.36■□□□□ 0.05
NRXN1-235ENST00000634412 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
NRXN1-235ENST00000634412 ARHGAP35Q9NRY4 1499 aa15.34■□□□□ 0.05
NRXN1-235ENST00000634412 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.04
NRXN1-235ENST00000634412 ABCA5Q8WWZ7 1642 aa15.3■□□□□ 0.04
NRXN1-235ENST00000634412 MAP3K1Q13233 1512 aa15.29■□□□□ 0.04
NRXN1-235ENST00000634412 CTTNBP2Q8WZ74 1663 aa15.28■□□□□ 0.04
NRXN1-235ENST00000634412 EFCAB5A4FU69 1503 aa15.25■□□□□ 0.03
NRXN1-235ENST00000634412 TTBK1Q5TCY1 1321 aaPredicted RBP15.25■□□□□ 0.03
NRXN1-235ENST00000634412 RANGAP1P46060 587 aaPredicted RBP15.24■□□□□ 0.03
NRXN1-235ENST00000634412 TARBP1Q13395 1621 aaKnown RBP15.23■□□□□ 0.03
NRXN1-235ENST00000634412 CCER1Q8TC90 406 aaPredicted RBP15.23■□□□□ 0.03
NRXN1-235ENST00000634412 FHAD1B1AJZ9 1412 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms