RNA–Protein interactions for RNA: ENST00000633773.1

LINC01002-233, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5 BASIC

Gene LINC01002, Length 609 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-233ENST00000633773 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.82
LINC01002-233ENST00000633773 CCDC180Q9P1Z9 1646 aa23.29■■□□□ 1.32
LINC01002-233ENST00000633773 ABCC9O60706 1549 aa22.52■■□□□ 1.2
LINC01002-233ENST00000633773 DCAF8L2P0C7V8 631 aa22.17■■□□□ 1.14
LINC01002-233ENST00000633773 ZCCHC6Q5VYS8 1495 aaKnown RBP22.07■■□□□ 1.12
LINC01002-233ENST00000633773 NACADO15069 1562 aa21.82■■□□□ 1.08
LINC01002-233ENST00000633773 RB1CC1Q8TDY2 1594 aa21.79■■□□□ 1.08
LINC01002-233ENST00000633773 DCAF1Q9Y4B6 1507 aa21.79■■□□□ 1.08
LINC01002-233ENST00000633773 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
LINC01002-233ENST00000633773 SCRIBQ14160 1630 aa21.41■■□□□ 1.02
LINC01002-233ENST00000633773 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
LINC01002-233ENST00000633773 UNC13AQ9UPW8 1703 aa21.2■□□□□ 0.98
LINC01002-233ENST00000633773 PABPN1Q86U42 306 aaKnown RBP eCLIP21.13■□□□□ 0.97
LINC01002-233ENST00000633773 BICRAQ9NZM4 1560 aa20.98■□□□□ 0.95
LINC01002-233ENST00000633773 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
LINC01002-233ENST00000633773 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
LINC01002-233ENST00000633773 BAZ1AQ9NRL2 1556 aaPredicted RBP20.49■□□□□ 0.87
LINC01002-233ENST00000633773 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
LINC01002-233ENST00000633773 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
LINC01002-233ENST00000633773 CC2D2AQ9P2K1 1620 aa20.32■□□□□ 0.84
LINC01002-233ENST00000633773 SUPT5HO00267 1087 aaKnown RBP20.27■□□□□ 0.84
LINC01002-233ENST00000633773 RSF1Q96T23 1441 aaPredicted RBP20.27■□□□□ 0.83
LINC01002-233ENST00000633773 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
LINC01002-233ENST00000633773 ATAD2BQ9ULI0 1458 aa20.19■□□□□ 0.82
LINC01002-233ENST00000633773 WIZO95785 1651 aa20.19■□□□□ 0.82
LINC01002-233ENST00000633773 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
LINC01002-233ENST00000633773 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
LINC01002-233ENST00000633773 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
LINC01002-233ENST00000633773 NCAPD3P42695 1498 aa20.08■□□□□ 0.81
LINC01002-233ENST00000633773 HMGXB3Q12766 1538 aa20.06■□□□□ 0.8
LINC01002-233ENST00000633773 TOP2AP11388 1531 aaKnown RBP20.01■□□□□ 0.79
LINC01002-233ENST00000633773 CCDC88BA6NC98 1476 aa19.75■□□□□ 0.75
LINC01002-233ENST00000633773 AEBP2Q6ZN18 517 aaPredicted RBP19.69■□□□□ 0.74
LINC01002-233ENST00000633773 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
LINC01002-233ENST00000633773 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
LINC01002-233ENST00000633773 NESP48681 1621 aa19.54■□□□□ 0.72
LINC01002-233ENST00000633773 CFTRP13569 1480 aa19.51■□□□□ 0.71
LINC01002-233ENST00000633773 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
LINC01002-233ENST00000633773 PDS5BQ9NTI5 1447 aa19.46■□□□□ 0.71
LINC01002-233ENST00000633773 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
LINC01002-233ENST00000633773 FANCD2Q9BXW9 1451 aa19.4■□□□□ 0.7
LINC01002-233ENST00000633773 CEP164Q9UPV0 1460 aa19.37■□□□□ 0.69
LINC01002-233ENST00000633773 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.68
LINC01002-233ENST00000633773 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
LINC01002-233ENST00000633773 MRC2Q9UBG0 1479 aa19.22■□□□□ 0.67
LINC01002-233ENST00000633773 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
LINC01002-233ENST00000633773 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
LINC01002-233ENST00000633773 DNMBPQ6XZF7 1577 aa19.13■□□□□ 0.65
LINC01002-233ENST00000633773 THOC2Q8NI27 1593 aaKnown RBP19.13■□□□□ 0.65
LINC01002-233ENST00000633773 URB2Q14146 1524 aaKnown RBP19.12■□□□□ 0.65
LINC01002-233ENST00000633773 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
LINC01002-233ENST00000633773 TRIM41Q8WV44 630 aa19.1■□□□□ 0.65
LINC01002-233ENST00000633773 WDR62O43379 1518 aa19.09■□□□□ 0.65
LINC01002-233ENST00000633773 CUX1P39880 1505 aa19.09■□□□□ 0.65
LINC01002-233ENST00000633773 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
LINC01002-233ENST00000633773 TOP2BQ02880 1626 aa19.03■□□□□ 0.64
LINC01002-233ENST00000633773 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.63
LINC01002-233ENST00000633773 BIVM-ERCC5R4GMW8 1640 aa19.01■□□□□ 0.63
LINC01002-233ENST00000633773 CUX2O14529 1486 aa18.97■□□□□ 0.63
LINC01002-233ENST00000633773 POLA1P09884 1462 aaPredicted RBP18.96■□□□□ 0.63
LINC01002-233ENST00000633773 SOGA1O94964 1423 aa18.93■□□□□ 0.62
LINC01002-233ENST00000633773 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
LINC01002-233ENST00000633773 RAD54L2Q9Y4B4 1467 aa18.9■□□□□ 0.62
LINC01002-233ENST00000633773 TARBP1Q13395 1621 aaKnown RBP18.8■□□□□ 0.6
LINC01002-233ENST00000633773 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
LINC01002-233ENST00000633773 TDRD9Q8NDG6 1382 aaKnown RBP18.79■□□□□ 0.6
LINC01002-233ENST00000633773 KIF27Q86VH2 1401 aa18.77■□□□□ 0.6
LINC01002-233ENST00000633773 ZNF608Q9ULD9 1512 aaPredicted RBP18.76■□□□□ 0.59
LINC01002-233ENST00000633773 FAM9AQ8IZU1 332 aaPredicted RBP18.76■□□□□ 0.59
LINC01002-233ENST00000633773 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
LINC01002-233ENST00000633773 EIF4G3O43432 1585 aaKnown RBP18.73■□□□□ 0.59
LINC01002-233ENST00000633773 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.59
LINC01002-233ENST00000633773 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
LINC01002-233ENST00000633773 ABCA5Q8WWZ7 1642 aa18.67■□□□□ 0.58
LINC01002-233ENST00000633773 EEA1Q15075 1411 aa18.66■□□□□ 0.58
LINC01002-233ENST00000633773 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
LINC01002-233ENST00000633773 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
LINC01002-233ENST00000633773 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.57
LINC01002-233ENST00000633773 SNAPC4Q5SXM2 1469 aa18.6■□□□□ 0.57
LINC01002-233ENST00000633773 FBLN2P98095 1184 aa18.6■□□□□ 0.57
LINC01002-233ENST00000633773 ERICH3Q5RHP9 1530 aa18.59■□□□□ 0.57
LINC01002-233ENST00000633773 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
LINC01002-233ENST00000633773 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
LINC01002-233ENST00000633773 MAGI1Q96QZ7 1491 aaPredicted RBP18.55■□□□□ 0.56
LINC01002-233ENST00000633773 IGF1RP08069 1367 aa18.55■□□□□ 0.56
LINC01002-233ENST00000633773 CUL7Q14999 1698 aa18.54■□□□□ 0.56
LINC01002-233ENST00000633773 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
LINC01002-233ENST00000633773 ADAMTS12P58397 1594 aa18.52■□□□□ 0.56
LINC01002-233ENST00000633773 CARMIL1Q5VZK9 1371 aa18.52■□□□□ 0.55
LINC01002-233ENST00000633773 FHAD1B1AJZ9 1412 aa18.51■□□□□ 0.55
LINC01002-233ENST00000633773 SYNJ2O15056 1496 aa18.48■□□□□ 0.55
LINC01002-233ENST00000633773 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.54
LINC01002-233ENST00000633773 CHD1O14646 1710 aa18.42■□□□□ 0.54
LINC01002-233ENST00000633773 UBTFP17480 764 aaKnown RBP18.41■□□□□ 0.54
LINC01002-233ENST00000633773 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
LINC01002-233ENST00000633773 GRIN2AQ12879 1464 aa18.4■□□□□ 0.54
LINC01002-233ENST00000633773 PRXQ9BXM0 1461 aa18.4■□□□□ 0.54
LINC01002-233ENST00000633773 KIF21BO75037 1637 aa18.4■□□□□ 0.54
LINC01002-233ENST00000633773 RANGAP1P46060 587 aaPredicted RBP18.31■□□□□ 0.52
LINC01002-233ENST00000633773 OSCARQ8IYS5 282 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms