RNA–Protein interactions for RNA: ENST00000631832.1

LINC01002-208, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5

Gene LINC01002, Length 622 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-208ENST00000631832 NISCHQ9Y2I1 1504 aa25.71■■□□□ 1.71
LINC01002-208ENST00000631832 CCDC180Q9P1Z9 1646 aa22.8■■□□□ 1.24
LINC01002-208ENST00000631832 ABCC9O60706 1549 aa22.37■■□□□ 1.17
LINC01002-208ENST00000631832 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.05
LINC01002-208ENST00000631832 RB1CC1Q8TDY2 1594 aa21.45■■□□□ 1.02
LINC01002-208ENST00000631832 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
LINC01002-208ENST00000631832 NACADO15069 1562 aa21.41■■□□□ 1.02
LINC01002-208ENST00000631832 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
LINC01002-208ENST00000631832 DCAF1Q9Y4B6 1507 aa21.18■□□□□ 0.98
LINC01002-208ENST00000631832 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
LINC01002-208ENST00000631832 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.94
LINC01002-208ENST00000631832 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
LINC01002-208ENST00000631832 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
LINC01002-208ENST00000631832 SHROOM4Q9ULL8 1493 aa20.55■□□□□ 0.88
LINC01002-208ENST00000631832 DNAJC5BQ9UF47 199 aa20.46■□□□□ 0.87
LINC01002-208ENST00000631832 EIF4G1Q04637 1599 aaKnown RBP20.26■□□□□ 0.83
LINC01002-208ENST00000631832 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
LINC01002-208ENST00000631832 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
LINC01002-208ENST00000631832 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
LINC01002-208ENST00000631832 BAZ1AQ9NRL2 1556 aaPredicted RBP19.91■□□□□ 0.78
LINC01002-208ENST00000631832 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
LINC01002-208ENST00000631832 ATAD2BQ9ULI0 1458 aa19.81■□□□□ 0.76
LINC01002-208ENST00000631832 SMARCA2P51531 1590 aa19.77■□□□□ 0.76
LINC01002-208ENST00000631832 NCAPD3P42695 1498 aa19.74■□□□□ 0.75
LINC01002-208ENST00000631832 WIZO95785 1651 aa19.7■□□□□ 0.74
LINC01002-208ENST00000631832 BAZ1BQ9UIG0 1483 aaKnown RBP19.68■□□□□ 0.74
LINC01002-208ENST00000631832 PEG3Q9GZU2 1588 aa19.68■□□□□ 0.74
LINC01002-208ENST00000631832 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
LINC01002-208ENST00000631832 RSF1Q96T23 1441 aaPredicted RBP19.63■□□□□ 0.73
LINC01002-208ENST00000631832 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
LINC01002-208ENST00000631832 NESP48681 1621 aa19.38■□□□□ 0.69
LINC01002-208ENST00000631832 SUPT5HO00267 1087 aaKnown RBP19.34■□□□□ 0.69
LINC01002-208ENST00000631832 ERCC6Q03468 1493 aa19.25■□□□□ 0.67
LINC01002-208ENST00000631832 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
LINC01002-208ENST00000631832 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
LINC01002-208ENST00000631832 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
LINC01002-208ENST00000631832 KIF21AQ7Z4S6 1674 aa19.15■□□□□ 0.66
LINC01002-208ENST00000631832 PDS5BQ9NTI5 1447 aa19.11■□□□□ 0.65
LINC01002-208ENST00000631832 CFTRP13569 1480 aa19.09■□□□□ 0.65
LINC01002-208ENST00000631832 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
LINC01002-208ENST00000631832 PRDM2Q13029 1718 aa19.01■□□□□ 0.63
LINC01002-208ENST00000631832 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
LINC01002-208ENST00000631832 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
LINC01002-208ENST00000631832 MRC2Q9UBG0 1479 aa18.93■□□□□ 0.62
LINC01002-208ENST00000631832 CUX2O14529 1486 aa18.92■□□□□ 0.62
LINC01002-208ENST00000631832 WDR62O43379 1518 aa18.84■□□□□ 0.61
LINC01002-208ENST00000631832 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
LINC01002-208ENST00000631832 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
LINC01002-208ENST00000631832 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
LINC01002-208ENST00000631832 ABCC8Q09428 1581 aa18.65■□□□□ 0.58
LINC01002-208ENST00000631832 CUX1P39880 1505 aa18.63■□□□□ 0.57
LINC01002-208ENST00000631832 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
LINC01002-208ENST00000631832 FGD5Q6ZNL6 1462 aa18.56■□□□□ 0.56
LINC01002-208ENST00000631832 IFT140Q96RY7 1462 aa18.55■□□□□ 0.56
LINC01002-208ENST00000631832 RAD54L2Q9Y4B4 1467 aa18.55■□□□□ 0.56
LINC01002-208ENST00000631832 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
LINC01002-208ENST00000631832 WRNQ14191 1432 aaPredicted RBP eCLIP18.52■□□□□ 0.56
LINC01002-208ENST00000631832 SOGA1O94964 1423 aa18.51■□□□□ 0.55
LINC01002-208ENST00000631832 TARBP1Q13395 1621 aaKnown RBP18.51■□□□□ 0.55
LINC01002-208ENST00000631832 SYNJ1O43426 1573 aa18.51■□□□□ 0.55
LINC01002-208ENST00000631832 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
LINC01002-208ENST00000631832 BIVM-ERCC5R4GMW8 1640 aa18.46■□□□□ 0.55
LINC01002-208ENST00000631832 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.54
LINC01002-208ENST00000631832 EIF4G3O43432 1585 aaKnown RBP18.45■□□□□ 0.54
LINC01002-208ENST00000631832 TDRD9Q8NDG6 1382 aaKnown RBP18.43■□□□□ 0.54
LINC01002-208ENST00000631832 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
LINC01002-208ENST00000631832 ABCA10Q8WWZ4 1543 aa18.32■□□□□ 0.52
LINC01002-208ENST00000631832 DNAJC5Q9H3Z4 198 aa18.3■□□□□ 0.52
LINC01002-208ENST00000631832 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
LINC01002-208ENST00000631832 GAPVD1Q14C86 1478 aa18.28■□□□□ 0.52
LINC01002-208ENST00000631832 FBLN2P98095 1184 aa18.28■□□□□ 0.52
LINC01002-208ENST00000631832 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.52
LINC01002-208ENST00000631832 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
LINC01002-208ENST00000631832 CHD1O14646 1710 aa18.25■□□□□ 0.51
LINC01002-208ENST00000631832 GRIN2BQ13224 1484 aa18.25■□□□□ 0.51
LINC01002-208ENST00000631832 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
LINC01002-208ENST00000631832 TRIM41Q8WV44 630 aa18.2■□□□□ 0.5
LINC01002-208ENST00000631832 CHMP7Q8WUX9 453 aaPredicted RBP18.17■□□□□ 0.5
LINC01002-208ENST00000631832 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
LINC01002-208ENST00000631832 SYNJ2O15056 1496 aa18.12■□□□□ 0.49
LINC01002-208ENST00000631832 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
LINC01002-208ENST00000631832 ADAMTS12P58397 1594 aa18.1■□□□□ 0.49
LINC01002-208ENST00000631832 ERICH3Q5RHP9 1530 aa18.1■□□□□ 0.49
LINC01002-208ENST00000631832 RUSC2Q8N2Y8 1516 aa18.07■□□□□ 0.48
LINC01002-208ENST00000631832 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
LINC01002-208ENST00000631832 IGF1RP08069 1367 aa18.04■□□□□ 0.48
LINC01002-208ENST00000631832 GRIN2AQ12879 1464 aa18.03■□□□□ 0.48
LINC01002-208ENST00000631832 CHIC1Q5VXU3 224 aa18.02■□□□□ 0.48
LINC01002-208ENST00000631832 CUL7Q14999 1698 aa17.97■□□□□ 0.47
LINC01002-208ENST00000631832 CEP170Q5SW79 1584 aa17.97■□□□□ 0.47
LINC01002-208ENST00000631832 CLASP1Q7Z460 1538 aa17.97■□□□□ 0.47
LINC01002-208ENST00000631832 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
LINC01002-208ENST00000631832 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
LINC01002-208ENST00000631832 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
LINC01002-208ENST00000631832 CARMIL1Q5VZK9 1371 aa17.94■□□□□ 0.46
LINC01002-208ENST00000631832 FAM9AQ8IZU1 332 aaPredicted RBP17.93■□□□□ 0.46
LINC01002-208ENST00000631832 ARHGEF11O15085 1522 aa17.93■□□□□ 0.46
LINC01002-208ENST00000631832 NUP160Q12769 1436 aa17.91■□□□□ 0.46
LINC01002-208ENST00000631832 RAPGEF2Q9Y4G8 1499 aa17.83■□□□□ 0.45
LINC01002-208ENST00000631832 CYB5RLQ6IPT4 315 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms