RNA–Protein interactions for RNA: ENST00000628907.2

LINC00836-204, long intergenic non-protein coding RNA 836, humanhuman

TSL 4

Gene LINC00836, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00836-204ENST00000628907 NISCHQ9Y2I1 1504 aa15.86■□□□□ 0.13
LINC00836-204ENST00000628907 CCDC180Q9P1Z9 1646 aa14.01□□□□□ -0.17
LINC00836-204ENST00000628907 ABCC9O60706 1549 aa13.57□□□□□ -0.24
LINC00836-204ENST00000628907 ZCCHC6Q5VYS8 1495 aaKnown RBP13.24□□□□□ -0.29
LINC00836-204ENST00000628907 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
LINC00836-204ENST00000628907 NACADO15069 1562 aa13.11□□□□□ -0.31
LINC00836-204ENST00000628907 RB1CC1Q8TDY2 1594 aa13.09□□□□□ -0.31
LINC00836-204ENST00000628907 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.31
LINC00836-204ENST00000628907 MYO15BQ96JP2 1530 aa13.04□□□□□ -0.32
LINC00836-204ENST00000628907 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.34
LINC00836-204ENST00000628907 SCRIBQ14160 1630 aa12.86□□□□□ -0.35
LINC00836-204ENST00000628907 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
LINC00836-204ENST00000628907 SHROOM4Q9ULL8 1493 aa12.72□□□□□ -0.37
LINC00836-204ENST00000628907 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00836-204ENST00000628907 CECR2Q9BXF3 1484 aa12.37□□□□□ -0.43
LINC00836-204ENST00000628907 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
LINC00836-204ENST00000628907 DNAJC5BQ9UF47 199 aa12.29□□□□□ -0.44
LINC00836-204ENST00000628907 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
LINC00836-204ENST00000628907 CC2D2AQ9P2K1 1620 aa12.28□□□□□ -0.44
LINC00836-204ENST00000628907 BAZ1AQ9NRL2 1556 aaPredicted RBP12.26□□□□□ -0.45
LINC00836-204ENST00000628907 MROH2BQ7Z745 1585 aa12.26□□□□□ -0.45
LINC00836-204ENST00000628907 WIZO95785 1651 aa12.17□□□□□ -0.46
LINC00836-204ENST00000628907 RSF1Q96T23 1441 aaPredicted RBP12.16□□□□□ -0.46
LINC00836-204ENST00000628907 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
LINC00836-204ENST00000628907 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
LINC00836-204ENST00000628907 PEG3Q9GZU2 1588 aa12.12□□□□□ -0.47
LINC00836-204ENST00000628907 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
LINC00836-204ENST00000628907 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
LINC00836-204ENST00000628907 HMGXB3Q12766 1538 aa12.05□□□□□ -0.48
LINC00836-204ENST00000628907 SUPT5HO00267 1087 aaKnown RBP12.04□□□□□ -0.48
LINC00836-204ENST00000628907 TOP2AP11388 1531 aaKnown RBP12□□□□□ -0.49
LINC00836-204ENST00000628907 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
LINC00836-204ENST00000628907 NESP48681 1621 aa11.82□□□□□ -0.52
LINC00836-204ENST00000628907 CADPSQ9ULU8 1353 aa11.75□□□□□ -0.53
LINC00836-204ENST00000628907 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
LINC00836-204ENST00000628907 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
LINC00836-204ENST00000628907 CFTRP13569 1480 aa11.72□□□□□ -0.53
LINC00836-204ENST00000628907 KIF21AQ7Z4S6 1674 aa11.7□□□□□ -0.54
LINC00836-204ENST00000628907 ERCC6Q03468 1493 aa11.65□□□□□ -0.54
LINC00836-204ENST00000628907 PDS5BQ9NTI5 1447 aa11.65□□□□□ -0.54
LINC00836-204ENST00000628907 FANCD2Q9BXW9 1451 aa11.64□□□□□ -0.55
LINC00836-204ENST00000628907 CEP164Q9UPV0 1460 aa11.6□□□□□ -0.55
LINC00836-204ENST00000628907 THOC2Q8NI27 1593 aaKnown RBP11.57□□□□□ -0.56
LINC00836-204ENST00000628907 MRC2Q9UBG0 1479 aa11.54□□□□□ -0.56
LINC00836-204ENST00000628907 URB2Q14146 1524 aaKnown RBP11.53□□□□□ -0.56
LINC00836-204ENST00000628907 ABCC8Q09428 1581 aa11.53□□□□□ -0.56
LINC00836-204ENST00000628907 WDR62O43379 1518 aa11.5□□□□□ -0.57
LINC00836-204ENST00000628907 CUX1P39880 1505 aa11.49□□□□□ -0.57
LINC00836-204ENST00000628907 TOPBP1Q92547 1522 aa11.49□□□□□ -0.57
LINC00836-204ENST00000628907 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
LINC00836-204ENST00000628907 SYNJ1O43426 1573 aa11.46□□□□□ -0.57
LINC00836-204ENST00000628907 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
LINC00836-204ENST00000628907 BIVM-ERCC5R4GMW8 1640 aa11.43□□□□□ -0.58
LINC00836-204ENST00000628907 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
LINC00836-204ENST00000628907 CUX2O14529 1486 aa11.42□□□□□ -0.58
LINC00836-204ENST00000628907 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.58
LINC00836-204ENST00000628907 POLA1P09884 1462 aaPredicted RBP11.39□□□□□ -0.59
LINC00836-204ENST00000628907 RAD54L2Q9Y4B4 1467 aa11.38□□□□□ -0.59
LINC00836-204ENST00000628907 TARBP1Q13395 1621 aaKnown RBP11.35□□□□□ -0.59
LINC00836-204ENST00000628907 SOGA1O94964 1423 aa11.35□□□□□ -0.59
LINC00836-204ENST00000628907 IFT140Q96RY7 1462 aa11.33□□□□□ -0.6
LINC00836-204ENST00000628907 CHIC1Q5VXU3 224 aa11.33□□□□□ -0.6
LINC00836-204ENST00000628907 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
LINC00836-204ENST00000628907 ZNF608Q9ULD9 1512 aaPredicted RBP11.32□□□□□ -0.6
LINC00836-204ENST00000628907 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
LINC00836-204ENST00000628907 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
LINC00836-204ENST00000628907 ABCA10Q8WWZ4 1543 aa11.28□□□□□ -0.6
LINC00836-204ENST00000628907 TDRD9Q8NDG6 1382 aaKnown RBP11.28□□□□□ -0.6
LINC00836-204ENST00000628907 AQRO60306 1485 aaKnown RBP eCLIP11.27□□□□□ -0.6
LINC00836-204ENST00000628907 ABCA5Q8WWZ7 1642 aa11.25□□□□□ -0.61
LINC00836-204ENST00000628907 PBRM1Q86U86 1689 aa11.24□□□□□ -0.61
LINC00836-204ENST00000628907 RUSC2Q8N2Y8 1516 aa11.22□□□□□ -0.61
LINC00836-204ENST00000628907 GAPVD1Q14C86 1478 aa11.21□□□□□ -0.61
LINC00836-204ENST00000628907 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
LINC00836-204ENST00000628907 GRIN2BQ13224 1484 aa11.18□□□□□ -0.62
LINC00836-204ENST00000628907 SNAPC4Q5SXM2 1469 aa11.17□□□□□ -0.62
LINC00836-204ENST00000628907 FAM9AQ8IZU1 332 aaPredicted RBP11.15□□□□□ -0.62
LINC00836-204ENST00000628907 CHD1O14646 1710 aa11.14□□□□□ -0.63
LINC00836-204ENST00000628907 ERICH3Q5RHP9 1530 aa11.14□□□□□ -0.63
LINC00836-204ENST00000628907 ADAMTS12P58397 1594 aa11.13□□□□□ -0.63
LINC00836-204ENST00000628907 IGF1RP08069 1367 aa11.13□□□□□ -0.63
LINC00836-204ENST00000628907 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
LINC00836-204ENST00000628907 FBLN2P98095 1184 aa11.1□□□□□ -0.63
LINC00836-204ENST00000628907 CUL7Q14999 1698 aa11.1□□□□□ -0.63
LINC00836-204ENST00000628907 SYNJ2O15056 1496 aa11.08□□□□□ -0.64
LINC00836-204ENST00000628907 FHAD1B1AJZ9 1412 aa11.08□□□□□ -0.64
LINC00836-204ENST00000628907 CHMP7Q8WUX9 453 aaPredicted RBP11.07□□□□□ -0.64
LINC00836-204ENST00000628907 CSRNP3Q8WYN3 585 aa11.07□□□□□ -0.64
LINC00836-204ENST00000628907 EEA1Q15075 1411 aa11.07□□□□□ -0.64
LINC00836-204ENST00000628907 CARMIL1Q5VZK9 1371 aa11.06□□□□□ -0.64
LINC00836-204ENST00000628907 GRIN2AQ12879 1464 aa11.04□□□□□ -0.64
LINC00836-204ENST00000628907 EHMT2Q96KQ7 1210 aa11.03□□□□□ -0.64
LINC00836-204ENST00000628907 PRXQ9BXM0 1461 aa11.03□□□□□ -0.64
LINC00836-204ENST00000628907 RAPGEF2Q9Y4G8 1499 aa11.02□□□□□ -0.65
LINC00836-204ENST00000628907 CEP170Q5SW79 1584 aa11.02□□□□□ -0.65
LINC00836-204ENST00000628907 KIF21BO75037 1637 aa10.99□□□□□ -0.65
LINC00836-204ENST00000628907 OSCARQ8IYS5 282 aa10.99□□□□□ -0.65
LINC00836-204ENST00000628907 NUP160Q12769 1436 aa10.97□□□□□ -0.65
LINC00836-204ENST00000628907 CTTNBP2Q8WZ74 1663 aa10.96□□□□□ -0.65
LINC00836-204ENST00000628907 CLASP1Q7Z460 1538 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms