RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
SPTAN1-215ENST00000628867 ABCC9O60706 1549 aa17.78■□□□□ 0.44
SPTAN1-215ENST00000628867 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
SPTAN1-215ENST00000628867 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
SPTAN1-215ENST00000628867 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
SPTAN1-215ENST00000628867 DCAF8L2P0C7V8 631 aa16.7■□□□□ 0.26
SPTAN1-215ENST00000628867 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
SPTAN1-215ENST00000628867 NACADO15069 1562 aa16.49■□□□□ 0.23
SPTAN1-215ENST00000628867 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
SPTAN1-215ENST00000628867 BICRAQ9NZM4 1560 aa16.11■□□□□ 0.17
SPTAN1-215ENST00000628867 MYO15BQ96JP2 1530 aa16.08■□□□□ 0.16
SPTAN1-215ENST00000628867 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
SPTAN1-215ENST00000628867 CC2D2AQ9P2K1 1620 aa15.96■□□□□ 0.15
SPTAN1-215ENST00000628867 DNAJC5Q9H3Z4 198 aa15.95■□□□□ 0.14
SPTAN1-215ENST00000628867 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
SPTAN1-215ENST00000628867 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.12
SPTAN1-215ENST00000628867 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
SPTAN1-215ENST00000628867 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
SPTAN1-215ENST00000628867 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
SPTAN1-215ENST00000628867 ERCC6Q03468 1493 aa15.46■□□□□ 0.06
SPTAN1-215ENST00000628867 CUX2O14529 1486 aa15.44■□□□□ 0.06
SPTAN1-215ENST00000628867 NCAPD3P42695 1498 aa15.25■□□□□ 0.03
SPTAN1-215ENST00000628867 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
SPTAN1-215ENST00000628867 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
SPTAN1-215ENST00000628867 NESP48681 1621 aa15.11■□□□□ 0.01
SPTAN1-215ENST00000628867 SMARCA2P51531 1590 aa15.09■□□□□ 0.01
SPTAN1-215ENST00000628867 HMGXB3Q12766 1538 aa15.03■□□□□ -0
SPTAN1-215ENST00000628867 BAZ1BQ9UIG0 1483 aaKnown RBP15.02■□□□□ -0
SPTAN1-215ENST00000628867 PDS5BQ9NTI5 1447 aa14.99□□□□□ -0.01
SPTAN1-215ENST00000628867 SMARCA4P51532 1647 aa14.97□□□□□ -0.01
SPTAN1-215ENST00000628867 LAMC3Q9Y6N6 1575 aa14.94□□□□□ -0.02
SPTAN1-215ENST00000628867 THOC2Q8NI27 1593 aaKnown RBP14.93□□□□□ -0.02
SPTAN1-215ENST00000628867 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
SPTAN1-215ENST00000628867 OSCARQ8IYS5 282 aa14.86□□□□□ -0.03
SPTAN1-215ENST00000628867 CADPSQ9ULU8 1353 aa14.83□□□□□ -0.04
SPTAN1-215ENST00000628867 KIF21AQ7Z4S6 1674 aa14.82□□□□□ -0.04
SPTAN1-215ENST00000628867 MRC2Q9UBG0 1479 aa14.8□□□□□ -0.04
SPTAN1-215ENST00000628867 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
SPTAN1-215ENST00000628867 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
SPTAN1-215ENST00000628867 WDR62O43379 1518 aa14.69□□□□□ -0.06
SPTAN1-215ENST00000628867 CEP164Q9UPV0 1460 aa14.69□□□□□ -0.06
SPTAN1-215ENST00000628867 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
SPTAN1-215ENST00000628867 TRHP20396 242 aaPredicted RBP14.59□□□□□ -0.07
SPTAN1-215ENST00000628867 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
SPTAN1-215ENST00000628867 WIZO95785 1651 aa14.53□□□□□ -0.08
SPTAN1-215ENST00000628867 CFTRP13569 1480 aa14.5□□□□□ -0.09
SPTAN1-215ENST00000628867 AEBP2Q6ZN18 517 aaPredicted RBP14.49□□□□□ -0.09
SPTAN1-215ENST00000628867 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
SPTAN1-215ENST00000628867 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
SPTAN1-215ENST00000628867 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
SPTAN1-215ENST00000628867 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.09
SPTAN1-215ENST00000628867 FBLN2P98095 1184 aa14.45□□□□□ -0.1
SPTAN1-215ENST00000628867 ARHGEF11O15085 1522 aa14.42□□□□□ -0.1
SPTAN1-215ENST00000628867 IFT140Q96RY7 1462 aa14.4□□□□□ -0.1
SPTAN1-215ENST00000628867 ZNF608Q9ULD9 1512 aaPredicted RBP14.37□□□□□ -0.11
SPTAN1-215ENST00000628867 RSF1Q96T23 1441 aaPredicted RBP14.33□□□□□ -0.11
SPTAN1-215ENST00000628867 TOP2AP11388 1531 aaKnown RBP14.33□□□□□ -0.12
SPTAN1-215ENST00000628867 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
SPTAN1-215ENST00000628867 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
SPTAN1-215ENST00000628867 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.12
SPTAN1-215ENST00000628867 CHMP7Q8WUX9 453 aaPredicted RBP14.24□□□□□ -0.13
SPTAN1-215ENST00000628867 ARAP1Q96P48 1450 aa14.24□□□□□ -0.13
SPTAN1-215ENST00000628867 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
SPTAN1-215ENST00000628867 EIF4G3O43432 1585 aaKnown RBP14.22□□□□□ -0.13
SPTAN1-215ENST00000628867 PRDM2Q13029 1718 aa14.18□□□□□ -0.14
SPTAN1-215ENST00000628867 CHD1O14646 1710 aa14.17□□□□□ -0.14
SPTAN1-215ENST00000628867 TDRD9Q8NDG6 1382 aaKnown RBP14.17□□□□□ -0.14
SPTAN1-215ENST00000628867 DNMBPQ6XZF7 1577 aa14.17□□□□□ -0.14
SPTAN1-215ENST00000628867 SOGA1O94964 1423 aa14.15□□□□□ -0.14
SPTAN1-215ENST00000628867 POLA1P09884 1462 aaPredicted RBP14.1□□□□□ -0.15
SPTAN1-215ENST00000628867 RAD54L2Q9Y4B4 1467 aa14.1□□□□□ -0.15
SPTAN1-215ENST00000628867 TARBP1Q13395 1621 aaKnown RBP14.09□□□□□ -0.15
SPTAN1-215ENST00000628867 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
SPTAN1-215ENST00000628867 SYNJ1O43426 1573 aa14.06□□□□□ -0.16
SPTAN1-215ENST00000628867 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
SPTAN1-215ENST00000628867 MAGI1Q96QZ7 1491 aaPredicted RBP14.01□□□□□ -0.17
SPTAN1-215ENST00000628867 GAPVD1Q14C86 1478 aa14□□□□□ -0.17
SPTAN1-215ENST00000628867 CLASP1Q7Z460 1538 aa13.99□□□□□ -0.17
SPTAN1-215ENST00000628867 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
SPTAN1-215ENST00000628867 FGD5Q6ZNL6 1462 aa13.98□□□□□ -0.17
SPTAN1-215ENST00000628867 WDR97A6NE52 1622 aa13.94□□□□□ -0.18
SPTAN1-215ENST00000628867 NPM1P06748 294 aaKnown RBP eCLIP13.9□□□□□ -0.18
SPTAN1-215ENST00000628867 CUX1P39880 1505 aa13.85□□□□□ -0.19
SPTAN1-215ENST00000628867 FAM69CQ0P6D2 419 aa13.84□□□□□ -0.19
SPTAN1-215ENST00000628867 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
SPTAN1-215ENST00000628867 PBRM1Q86U86 1689 aa13.79□□□□□ -0.2
SPTAN1-215ENST00000628867 ABCA10Q8WWZ4 1543 aa13.78□□□□□ -0.2
SPTAN1-215ENST00000628867 ERCC6L2Q5T890 1561 aa13.77□□□□□ -0.21
SPTAN1-215ENST00000628867 JPH4Q96JJ6 628 aa13.77□□□□□ -0.21
SPTAN1-215ENST00000628867 WRNQ14191 1432 aaPredicted RBP eCLIP13.76□□□□□ -0.21
SPTAN1-215ENST00000628867 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
SPTAN1-215ENST00000628867 PRG4Q92954 1404 aaPredicted RBP13.73□□□□□ -0.21
SPTAN1-215ENST00000628867 FHAD1B1AJZ9 1412 aa13.73□□□□□ -0.21
SPTAN1-215ENST00000628867 NUP160Q12769 1436 aa13.73□□□□□ -0.21
SPTAN1-215ENST00000628867 ILDR1Q86SU0 546 aaPredicted RBP13.72□□□□□ -0.21
SPTAN1-215ENST00000628867 ABCA5Q8WWZ7 1642 aa13.71□□□□□ -0.22
SPTAN1-215ENST00000628867 KDM4FA0A1W2PPD8 638 aa13.68□□□□□ -0.22
SPTAN1-215ENST00000628867 SUPT5HO00267 1087 aaKnown RBP13.68□□□□□ -0.22
SPTAN1-215ENST00000628867 ABCC10Q5T3U5 1492 aa13.66□□□□□ -0.22
SPTAN1-215ENST00000628867 ADAMTS12P58397 1594 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms