RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 NISCHQ9Y2I1 1504 aa44.8■■■■■ 4.76
MECP2-216ENST00000627864 CCDC180Q9P1Z9 1646 aa39.65■■■■□ 3.94
MECP2-216ENST00000627864 ABCC9O60706 1549 aa38.34■■■■□ 3.73
MECP2-216ENST00000627864 ZCCHC6Q5VYS8 1495 aaKnown RBP37.39■■■■□ 3.58
MECP2-216ENST00000627864 DCAF8L2P0C7V8 631 aa37.34■■■■□ 3.57
MECP2-216ENST00000627864 NACADO15069 1562 aa37.12■■■■□ 3.53
MECP2-216ENST00000627864 RB1CC1Q8TDY2 1594 aa37.08■■■■□ 3.53
MECP2-216ENST00000627864 DCAF1Q9Y4B6 1507 aa37.04■■■■□ 3.52
MECP2-216ENST00000627864 MYO15BQ96JP2 1530 aa37■■■■□ 3.51
MECP2-216ENST00000627864 UNC13AQ9UPW8 1703 aa36.37■■■■□ 3.41
MECP2-216ENST00000627864 SCRIBQ14160 1630 aa36.25■■■■□ 3.39
MECP2-216ENST00000627864 BICRAQ9NZM4 1560 aa35.93■■■■□ 3.34
MECP2-216ENST00000627864 PABPN1Q86U42 306 aaKnown RBP eCLIP35.92■■■■□ 3.34
MECP2-216ENST00000627864 SHROOM4Q9ULL8 1493 aa35.76■■■■□ 3.32
MECP2-216ENST00000627864 EIF4G1Q04637 1599 aaKnown RBP34.94■■■■□ 3.18
MECP2-216ENST00000627864 CECR2Q9BXF3 1484 aa34.87■■■■□ 3.17
MECP2-216ENST00000627864 DNAJC5BQ9UF47 199 aa34.74■■■■□ 3.15
MECP2-216ENST00000627864 CC2D2AQ9P2K1 1620 aa34.71■■■■□ 3.15
MECP2-216ENST00000627864 BAZ1AQ9NRL2 1556 aaPredicted RBP34.69■■■■□ 3.14
MECP2-216ENST00000627864 SMARCA4P51532 1647 aa34.69■■■■□ 3.14
MECP2-216ENST00000627864 MROH2BQ7Z745 1585 aa34.56■■■■□ 3.12
MECP2-216ENST00000627864 ATAD2BQ9ULI0 1458 aa34.33■■■■□ 3.09
MECP2-216ENST00000627864 SMARCA2P51531 1590 aa34.33■■■■□ 3.09
MECP2-216ENST00000627864 RSF1Q96T23 1441 aaPredicted RBP34.3■■■■□ 3.08
MECP2-216ENST00000627864 PEG3Q9GZU2 1588 aa34.28■■■■□ 3.08
MECP2-216ENST00000627864 WIZO95785 1651 aa34.27■■■■□ 3.08
MECP2-216ENST00000627864 NCAPD3P42695 1498 aa34.22■■■■□ 3.07
MECP2-216ENST00000627864 HMGXB3Q12766 1538 aa34.11■■■■□ 3.05
MECP2-216ENST00000627864 BAZ1BQ9UIG0 1483 aaKnown RBP34.1■■■■□ 3.05
MECP2-216ENST00000627864 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
MECP2-216ENST00000627864 TOP2AP11388 1531 aaKnown RBP33.86■■■■□ 3.01
MECP2-216ENST00000627864 CCDC88BA6NC98 1476 aa33.48■■■□□ 2.95
MECP2-216ENST00000627864 NESP48681 1621 aa33.32■■■□□ 2.92
MECP2-216ENST00000627864 LAMC3Q9Y6N6 1575 aa33.29■■■□□ 2.92
MECP2-216ENST00000627864 CADPSQ9ULU8 1353 aa33.27■■■□□ 2.92
MECP2-216ENST00000627864 CFTRP13569 1480 aa33.16■■■□□ 2.9
MECP2-216ENST00000627864 PRDM2Q13029 1718 aa33.11■■■□□ 2.89
MECP2-216ENST00000627864 PDS5BQ9NTI5 1447 aa33.02■■■□□ 2.88
MECP2-216ENST00000627864 KIF21AQ7Z4S6 1674 aa33.01■■■□□ 2.88
MECP2-216ENST00000627864 ERCC6Q03468 1493 aa33■■■□□ 2.87
MECP2-216ENST00000627864 FANCD2Q9BXW9 1451 aa32.91■■■□□ 2.86
MECP2-216ENST00000627864 CEP164Q9UPV0 1460 aa32.82■■■□□ 2.84
MECP2-216ENST00000627864 THOC2Q8NI27 1593 aaKnown RBP32.7■■■□□ 2.82
MECP2-216ENST00000627864 MRC2Q9UBG0 1479 aa32.67■■■□□ 2.82
MECP2-216ENST00000627864 URB2Q14146 1524 aaKnown RBP32.56■■■□□ 2.8
MECP2-216ENST00000627864 WDR62O43379 1518 aa32.53■■■□□ 2.8
MECP2-216ENST00000627864 ABCC8Q09428 1581 aa32.45■■■□□ 2.79
MECP2-216ENST00000627864 DNMBPQ6XZF7 1577 aa32.45■■■□□ 2.79
MECP2-216ENST00000627864 TOPBP1Q92547 1522 aa32.45■■■□□ 2.78
MECP2-216ENST00000627864 CUX2O14529 1486 aa32.42■■■□□ 2.78
MECP2-216ENST00000627864 CUX1P39880 1505 aa32.38■■■□□ 2.77
MECP2-216ENST00000627864 WRNQ14191 1432 aaPredicted RBP eCLIP32.34■■■□□ 2.77
MECP2-216ENST00000627864 SYNJ1O43426 1573 aa32.28■■■□□ 2.76
MECP2-216ENST00000627864 BIVM-ERCC5R4GMW8 1640 aa32.26■■■□□ 2.76
MECP2-216ENST00000627864 TOP2BQ02880 1626 aa32.25■■■□□ 2.75
MECP2-216ENST00000627864 FGD5Q6ZNL6 1462 aa32.2■■■□□ 2.75
MECP2-216ENST00000627864 POLA1P09884 1462 aaPredicted RBP32.19■■■□□ 2.74
MECP2-216ENST00000627864 IFT140Q96RY7 1462 aa32.1■■■□□ 2.73
MECP2-216ENST00000627864 SOGA1O94964 1423 aa32.09■■■□□ 2.73
MECP2-216ENST00000627864 RAD54L2Q9Y4B4 1467 aa32.08■■■□□ 2.73
MECP2-216ENST00000627864 TARBP1Q13395 1621 aaKnown RBP32.07■■■□□ 2.72
MECP2-216ENST00000627864 TRIM41Q8WV44 630 aa31.96■■■□□ 2.71
MECP2-216ENST00000627864 WDR97A6NE52 1622 aa31.94■■■□□ 2.7
MECP2-216ENST00000627864 ZNF608Q9ULD9 1512 aaPredicted RBP31.94■■■□□ 2.7
MECP2-216ENST00000627864 CHIC1Q5VXU3 224 aa31.89■■■□□ 2.7
MECP2-216ENST00000627864 ABCA10Q8WWZ4 1543 aa31.88■■■□□ 2.69
MECP2-216ENST00000627864 EIF4G3O43432 1585 aaKnown RBP31.85■■■□□ 2.69
MECP2-216ENST00000627864 TDRD9Q8NDG6 1382 aaKnown RBP31.85■■■□□ 2.69
MECP2-216ENST00000627864 AQRO60306 1485 aaKnown RBP eCLIP31.84■■■□□ 2.69
MECP2-216ENST00000627864 ABCA5Q8WWZ7 1642 aa31.75■■■□□ 2.67
MECP2-216ENST00000627864 GAPVD1Q14C86 1478 aa31.72■■■□□ 2.67
MECP2-216ENST00000627864 PBRM1Q86U86 1689 aa31.71■■■□□ 2.67
MECP2-216ENST00000627864 GRIN2BQ13224 1484 aa31.64■■■□□ 2.66
MECP2-216ENST00000627864 KIF27Q86VH2 1401 aa31.63■■■□□ 2.65
MECP2-216ENST00000627864 RUSC2Q8N2Y8 1516 aa31.54■■■□□ 2.64
MECP2-216ENST00000627864 SNAPC4Q5SXM2 1469 aa31.53■■■□□ 2.64
MECP2-216ENST00000627864 ERICH3Q5RHP9 1530 aa31.52■■■□□ 2.64
MECP2-216ENST00000627864 MAGI1Q96QZ7 1491 aaPredicted RBP31.48■■■□□ 2.63
MECP2-216ENST00000627864 CHD1O14646 1710 aa31.44■■■□□ 2.62
MECP2-216ENST00000627864 IGF1RP08069 1367 aa31.43■■■□□ 2.62
MECP2-216ENST00000627864 ADAMTS12P58397 1594 aa31.4■■■□□ 2.62
MECP2-216ENST00000627864 FBLN2P98095 1184 aa31.4■■■□□ 2.62
MECP2-216ENST00000627864 CUL7Q14999 1698 aa31.38■■■□□ 2.61
MECP2-216ENST00000627864 SYNJ2O15056 1496 aa31.37■■■□□ 2.61
MECP2-216ENST00000627864 FHAD1B1AJZ9 1412 aa31.35■■■□□ 2.61
MECP2-216ENST00000627864 FAM9AQ8IZU1 332 aaPredicted RBP31.35■■■□□ 2.61
MECP2-216ENST00000627864 CHMP7Q8WUX9 453 aaPredicted RBP31.35■■■□□ 2.61
MECP2-216ENST00000627864 EEA1Q15075 1411 aa31.33■■■□□ 2.61
MECP2-216ENST00000627864 CARMIL1Q5VZK9 1371 aa31.28■■■□□ 2.6
MECP2-216ENST00000627864 CSRNP3Q8WYN3 585 aa31.27■■■□□ 2.6
MECP2-216ENST00000627864 GRIN2AQ12879 1464 aa31.23■■■□□ 2.59
MECP2-216ENST00000627864 OSCARQ8IYS5 282 aa31.22■■■□□ 2.59
MECP2-216ENST00000627864 RAPGEF2Q9Y4G8 1499 aa31.14■■■□□ 2.58
MECP2-216ENST00000627864 PRXQ9BXM0 1461 aa31.12■■■□□ 2.57
MECP2-216ENST00000627864 CEP170Q5SW79 1584 aa31.08■■■□□ 2.57
MECP2-216ENST00000627864 NUP160Q12769 1436 aa31.04■■■□□ 2.56
MECP2-216ENST00000627864 KIF21BO75037 1637 aa31.02■■■□□ 2.56
MECP2-216ENST00000627864 CLASP1Q7Z460 1538 aa30.99■■■□□ 2.55
MECP2-216ENST00000627864 EHMT2Q96KQ7 1210 aa30.94■■■□□ 2.54
MECP2-216ENST00000627864 CTTNBP2Q8WZ74 1663 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms