RNA–Protein interactions for RNA: ENST00000627420.2

LGI1-208, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 1 (best)

Gene LGI1, Length 2,278 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-208ENST00000627420 AEBP2Q6ZN18 517 aaPredicted RBP11.63□□□□□ -0.55
LGI1-208ENST00000627420 NISCHQ9Y2I1 1504 aa11.23□□□□□ -0.61
LGI1-208ENST00000627420 CHIC1Q5VXU3 224 aa11.12□□□□□ -0.63
LGI1-208ENST00000627420 ABCC9O60706 1549 aa10.14□□□□□ -0.79
LGI1-208ENST00000627420 CCDC180Q9P1Z9 1646 aa10.07□□□□□ -0.8
LGI1-208ENST00000627420 PHF23Q9BUL5 403 aaPredicted RBP9.93□□□□□ -0.82
LGI1-208ENST00000627420 SENP3Q9H4L4 574 aaPredicted RBP9.65□□□□□ -0.86
LGI1-208ENST00000627420 RB1CC1Q8TDY2 1594 aa9.63□□□□□ -0.87
LGI1-208ENST00000627420 NACADO15069 1562 aa9.55□□□□□ -0.88
LGI1-208ENST00000627420 DNAJC5BQ9UF47 199 aa9.54□□□□□ -0.88
LGI1-208ENST00000627420 DCAF8L2P0C7V8 631 aa9.53□□□□□ -0.88
LGI1-208ENST00000627420 PABPN1Q86U42 306 aaKnown RBP eCLIP9.45□□□□□ -0.9
LGI1-208ENST00000627420 MYO15BQ96JP2 1530 aa9.41□□□□□ -0.9
LGI1-208ENST00000627420 UNC13AQ9UPW8 1703 aa9.33□□□□□ -0.92
LGI1-208ENST00000627420 BICRAQ9NZM4 1560 aa9.32□□□□□ -0.92
LGI1-208ENST00000627420 ZCCHC6Q5VYS8 1495 aaKnown RBP9.29□□□□□ -0.92
LGI1-208ENST00000627420 DCAF1Q9Y4B6 1507 aa9.28□□□□□ -0.92
LGI1-208ENST00000627420 SHROOM4Q9ULL8 1493 aa9.22□□□□□ -0.93
LGI1-208ENST00000627420 SCRIBQ14160 1630 aa9.18□□□□□ -0.94
LGI1-208ENST00000627420 CECR2Q9BXF3 1484 aa9.14□□□□□ -0.95
LGI1-208ENST00000627420 CC2D2AQ9P2K1 1620 aa9.13□□□□□ -0.95
LGI1-208ENST00000627420 FOXD1Q16676 465 aa9.12□□□□□ -0.95
LGI1-208ENST00000627420 EIF4G1Q04637 1599 aaKnown RBP9.11□□□□□ -0.95
LGI1-208ENST00000627420 PLPPR3Q6T4P5 718 aa8.98□□□□□ -0.97
LGI1-208ENST00000627420 PPP6R1Q9UPN7 881 aa8.87□□□□□ -0.99
LGI1-208ENST00000627420 ADRA2BP18089 450 aa8.83□□□□□ -1
LGI1-208ENST00000627420 NCAPD3P42695 1498 aa8.83□□□□□ -1
LGI1-208ENST00000627420 DNAJC5Q9H3Z4 198 aa8.8□□□□□ -1
LGI1-208ENST00000627420 ATAD2BQ9ULI0 1458 aa8.79□□□□□ -1
LGI1-208ENST00000627420 POTEDQ86YR6 584 aa8.77□□□□□ -1.01
LGI1-208ENST00000627420 ERCC6Q03468 1493 aa8.76□□□□□ -1.01
LGI1-208ENST00000627420 SMARCA2P51531 1590 aa8.76□□□□□ -1.01
LGI1-208ENST00000627420 CUX2O14529 1486 aa8.75□□□□□ -1.01
LGI1-208ENST00000627420 SMARCA4P51532 1647 aa8.75□□□□□ -1.01
LGI1-208ENST00000627420 HMGXB3Q12766 1538 aa8.74□□□□□ -1.01
LGI1-208ENST00000627420 BAZ1AQ9NRL2 1556 aaPredicted RBP8.72□□□□□ -1.01
LGI1-208ENST00000627420 BAZ1BQ9UIG0 1483 aaKnown RBP8.71□□□□□ -1.02
LGI1-208ENST00000627420 NESP48681 1621 aa8.68□□□□□ -1.02
LGI1-208ENST00000627420 PEG3Q9GZU2 1588 aa8.67□□□□□ -1.02
LGI1-208ENST00000627420 MROH2BQ7Z745 1585 aa8.65□□□□□ -1.03
LGI1-208ENST00000627420 LAMC3Q9Y6N6 1575 aa8.62□□□□□ -1.03
LGI1-208ENST00000627420 PIAS4Q8N2W9 510 aaPredicted RBP8.61□□□□□ -1.03
LGI1-208ENST00000627420 PDS5BQ9NTI5 1447 aa8.6□□□□□ -1.03
LGI1-208ENST00000627420 THOC2Q8NI27 1593 aaKnown RBP8.58□□□□□ -1.04
LGI1-208ENST00000627420 CADPSQ9ULU8 1353 aa8.57□□□□□ -1.04
LGI1-208ENST00000627420 KIF21AQ7Z4S6 1674 aa8.53□□□□□ -1.04
LGI1-208ENST00000627420 WIZO95785 1651 aa8.52□□□□□ -1.04
LGI1-208ENST00000627420 MRC2Q9UBG0 1479 aa8.52□□□□□ -1.05
LGI1-208ENST00000627420 WDR62O43379 1518 aa8.48□□□□□ -1.05
LGI1-208ENST00000627420 RSF1Q96T23 1441 aaPredicted RBP8.47□□□□□ -1.05
LGI1-208ENST00000627420 PELP1Q8IZL8 1130 aaKnown RBP8.47□□□□□ -1.05
LGI1-208ENST00000627420 CEP164Q9UPV0 1460 aa8.47□□□□□ -1.05
LGI1-208ENST00000627420 FANCD2Q9BXW9 1451 aa8.46□□□□□ -1.06
LGI1-208ENST00000627420 CFTRP13569 1480 aa8.45□□□□□ -1.06
LGI1-208ENST00000627420 TOP2AP11388 1531 aaKnown RBP8.43□□□□□ -1.06
LGI1-208ENST00000627420 TRIM41Q8WV44 630 aa8.41□□□□□ -1.06
LGI1-208ENST00000627420 MYT1Q01538 1121 aa8.41□□□□□ -1.06
LGI1-208ENST00000627420 URB2Q14146 1524 aaKnown RBP8.38□□□□□ -1.07
LGI1-208ENST00000627420 OSCARQ8IYS5 282 aa8.37□□□□□ -1.07
LGI1-208ENST00000627420 CCDC88BA6NC98 1476 aa8.35□□□□□ -1.07
LGI1-208ENST00000627420 IFT140Q96RY7 1462 aa8.31□□□□□ -1.08
LGI1-208ENST00000627420 PRDM2Q13029 1718 aa8.3□□□□□ -1.08
LGI1-208ENST00000627420 TOPBP1Q92547 1522 aa8.29□□□□□ -1.08
LGI1-208ENST00000627420 ABCC8Q09428 1581 aa8.28□□□□□ -1.08
LGI1-208ENST00000627420 ZNF608Q9ULD9 1512 aaPredicted RBP8.28□□□□□ -1.08
LGI1-208ENST00000627420 DNMBPQ6XZF7 1577 aa8.25□□□□□ -1.09
LGI1-208ENST00000627420 MSH5O43196 834 aa8.22□□□□□ -1.09
LGI1-208ENST00000627420 EIF4G3O43432 1585 aaKnown RBP8.22□□□□□ -1.09
LGI1-208ENST00000627420 RIMBP3CA6NJZ7 1639 aa8.22□□□□□ -1.09
LGI1-208ENST00000627420 RIMBP3BA6NNM3 1639 aa8.22□□□□□ -1.09
LGI1-208ENST00000627420 RIMBP3Q9UFD9 1639 aa8.22□□□□□ -1.09
LGI1-208ENST00000627420 AQRO60306 1485 aaKnown RBP eCLIP8.22□□□□□ -1.09
LGI1-208ENST00000627420 TARBP1Q13395 1621 aaKnown RBP8.2□□□□□ -1.1
LGI1-208ENST00000627420 ARHGEF11O15085 1522 aa8.2□□□□□ -1.1
LGI1-208ENST00000627420 POLA1P09884 1462 aaPredicted RBP8.2□□□□□ -1.1
LGI1-208ENST00000627420 FBLN2P98095 1184 aa8.19□□□□□ -1.1
LGI1-208ENST00000627420 SOGA1O94964 1423 aa8.18□□□□□ -1.1
LGI1-208ENST00000627420 RAD54L2Q9Y4B4 1467 aa8.17□□□□□ -1.1
LGI1-208ENST00000627420 CYB5RLQ6IPT4 315 aa8.17□□□□□ -1.1
LGI1-208ENST00000627420 TDRD9Q8NDG6 1382 aaKnown RBP8.17□□□□□ -1.1
LGI1-208ENST00000627420 CHD1O14646 1710 aa8.14□□□□□ -1.11
LGI1-208ENST00000627420 FGD5Q6ZNL6 1462 aa8.14□□□□□ -1.11
LGI1-208ENST00000627420 CHMP7Q8WUX9 453 aaPredicted RBP8.13□□□□□ -1.11
LGI1-208ENST00000627420 SNAPC4Q5SXM2 1469 aa8.13□□□□□ -1.11
LGI1-208ENST00000627420 WDR97A6NE52 1622 aa8.13□□□□□ -1.11
LGI1-208ENST00000627420 CUX1P39880 1505 aa8.12□□□□□ -1.11
LGI1-208ENST00000627420 ARAP1Q96P48 1450 aa8.12□□□□□ -1.11
LGI1-208ENST00000627420 GRIN2BQ13224 1484 aa8.11□□□□□ -1.11
LGI1-208ENST00000627420 MAGI1Q96QZ7 1491 aaPredicted RBP8.1□□□□□ -1.11
LGI1-208ENST00000627420 TRHP20396 242 aaPredicted RBP8.1□□□□□ -1.11
LGI1-208ENST00000627420 SUPT5HO00267 1087 aaKnown RBP8.09□□□□□ -1.11
LGI1-208ENST00000627420 SYNJ1O43426 1573 aa8.08□□□□□ -1.12
LGI1-208ENST00000627420 TTBK1Q5TCY1 1321 aaPredicted RBP8.08□□□□□ -1.12
LGI1-208ENST00000627420 CLASP1Q7Z460 1538 aa8.08□□□□□ -1.12
LGI1-208ENST00000627420 SYNJ2O15056 1496 aa8.08□□□□□ -1.12
LGI1-208ENST00000627420 GAPVD1Q14C86 1478 aa8.07□□□□□ -1.12
LGI1-208ENST00000627420 MAPK8IP2Q13387 824 aaPredicted RBP8.06□□□□□ -1.12
LGI1-208ENST00000627420 ABCA10Q8WWZ4 1543 aa8.05□□□□□ -1.12
LGI1-208ENST00000627420 WRNQ14191 1432 aaPredicted RBP eCLIP8.03□□□□□ -1.12
LGI1-208ENST00000627420 PBRM1Q86U86 1689 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms