RNA–Protein interactions for RNA: ENST00000626733.1

CISTR-202, chondrogenesis-associated transcript, humanhuman

TSL 3 BASIC

Gene CISTR, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISTR-202ENST00000626733 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
CISTR-202ENST00000626733 ABCC9O60706 1549 aa24.55■■□□□ 1.52
CISTR-202ENST00000626733 CCDC180Q9P1Z9 1646 aa24.54■■□□□ 1.52
CISTR-202ENST00000626733 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
CISTR-202ENST00000626733 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
CISTR-202ENST00000626733 DCAF1Q9Y4B6 1507 aa23.07■■□□□ 1.28
CISTR-202ENST00000626733 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
CISTR-202ENST00000626733 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
CISTR-202ENST00000626733 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
CISTR-202ENST00000626733 NACADO15069 1562 aa22.93■■□□□ 1.26
CISTR-202ENST00000626733 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
CISTR-202ENST00000626733 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
CISTR-202ENST00000626733 UNC13AQ9UPW8 1703 aa22.54■■□□□ 1.2
CISTR-202ENST00000626733 BICRAQ9NZM4 1560 aa22.46■■□□□ 1.19
CISTR-202ENST00000626733 SCRIBQ14160 1630 aa22.34■■□□□ 1.17
CISTR-202ENST00000626733 CECR2Q9BXF3 1484 aa22.12■■□□□ 1.13
CISTR-202ENST00000626733 SHROOM4Q9ULL8 1493 aa22.11■■□□□ 1.13
CISTR-202ENST00000626733 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
CISTR-202ENST00000626733 DNAJC5Q9H3Z4 198 aa22.02■■□□□ 1.12
CISTR-202ENST00000626733 CHIC1Q5VXU3 224 aa21.93■■□□□ 1.1
CISTR-202ENST00000626733 EIF4G1Q04637 1599 aaKnown RBP21.89■■□□□ 1.09
CISTR-202ENST00000626733 BAZ1AQ9NRL2 1556 aaPredicted RBP21.51■■□□□ 1.03
CISTR-202ENST00000626733 SMARCA4P51532 1647 aa21.46■■□□□ 1.03
CISTR-202ENST00000626733 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
CISTR-202ENST00000626733 RSF1Q96T23 1441 aaPredicted RBP21.32■■□□□ 1
CISTR-202ENST00000626733 PEG3Q9GZU2 1588 aa21.28■■□□□ 1
CISTR-202ENST00000626733 CUX2O14529 1486 aa21.25■□□□□ 0.99
CISTR-202ENST00000626733 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
CISTR-202ENST00000626733 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
CISTR-202ENST00000626733 WIZO95785 1651 aa21.18■□□□□ 0.98
CISTR-202ENST00000626733 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
CISTR-202ENST00000626733 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
CISTR-202ENST00000626733 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
CISTR-202ENST00000626733 BAZ1BQ9UIG0 1483 aaKnown RBP21.05■□□□□ 0.96
CISTR-202ENST00000626733 SUPT5HO00267 1087 aaKnown RBP21.03■□□□□ 0.96
CISTR-202ENST00000626733 TOP2AP11388 1531 aaKnown RBP21.03■□□□□ 0.96
CISTR-202ENST00000626733 NESP48681 1621 aa20.98■□□□□ 0.95
CISTR-202ENST00000626733 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
CISTR-202ENST00000626733 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
CISTR-202ENST00000626733 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
CISTR-202ENST00000626733 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.89
CISTR-202ENST00000626733 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
CISTR-202ENST00000626733 CFTRP13569 1480 aa20.52■□□□□ 0.88
CISTR-202ENST00000626733 CADPSQ9ULU8 1353 aa20.52■□□□□ 0.88
CISTR-202ENST00000626733 PDS5BQ9NTI5 1447 aa20.47■□□□□ 0.87
CISTR-202ENST00000626733 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
CISTR-202ENST00000626733 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
CISTR-202ENST00000626733 WDR62O43379 1518 aa20.33■□□□□ 0.85
CISTR-202ENST00000626733 OSCARQ8IYS5 282 aa20.28■□□□□ 0.84
CISTR-202ENST00000626733 FANCD2Q9BXW9 1451 aa20.28■□□□□ 0.84
CISTR-202ENST00000626733 CEP164Q9UPV0 1460 aa20.23■□□□□ 0.83
CISTR-202ENST00000626733 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
CISTR-202ENST00000626733 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
CISTR-202ENST00000626733 RIMBP3CA6NJZ7 1639 aa20.07■□□□□ 0.8
CISTR-202ENST00000626733 RIMBP3BA6NNM3 1639 aa20.07■□□□□ 0.8
CISTR-202ENST00000626733 RIMBP3Q9UFD9 1639 aa20.07■□□□□ 0.8
CISTR-202ENST00000626733 DNMBPQ6XZF7 1577 aa20.07■□□□□ 0.8
CISTR-202ENST00000626733 CUX1P39880 1505 aa20.05■□□□□ 0.8
CISTR-202ENST00000626733 URB2Q14146 1524 aaKnown RBP20.05■□□□□ 0.8
CISTR-202ENST00000626733 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
CISTR-202ENST00000626733 BIVM-ERCC5R4GMW8 1640 aa20.04■□□□□ 0.8
CISTR-202ENST00000626733 SYNJ1O43426 1573 aa20.03■□□□□ 0.8
CISTR-202ENST00000626733 TOPBP1Q92547 1522 aa20.02■□□□□ 0.8
CISTR-202ENST00000626733 ARHGEF11O15085 1522 aa19.94■□□□□ 0.78
CISTR-202ENST00000626733 ZNF608Q9ULD9 1512 aaPredicted RBP19.93■□□□□ 0.78
CISTR-202ENST00000626733 CYB5RLQ6IPT4 315 aa19.91■□□□□ 0.78
CISTR-202ENST00000626733 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
CISTR-202ENST00000626733 POLA1P09884 1462 aaPredicted RBP19.88■□□□□ 0.77
CISTR-202ENST00000626733 TRHP20396 242 aaPredicted RBP19.82■□□□□ 0.76
CISTR-202ENST00000626733 TARBP1Q13395 1621 aaKnown RBP19.79■□□□□ 0.76
CISTR-202ENST00000626733 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
CISTR-202ENST00000626733 SOGA1O94964 1423 aa19.78■□□□□ 0.76
CISTR-202ENST00000626733 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
CISTR-202ENST00000626733 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
CISTR-202ENST00000626733 ARAP1Q96P48 1450 aa19.74■□□□□ 0.75
CISTR-202ENST00000626733 RAD54L2Q9Y4B4 1467 aa19.74■□□□□ 0.75
CISTR-202ENST00000626733 EIF4G3O43432 1585 aaKnown RBP19.68■□□□□ 0.74
CISTR-202ENST00000626733 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.74
CISTR-202ENST00000626733 ABCA5Q8WWZ7 1642 aa19.65■□□□□ 0.74
CISTR-202ENST00000626733 CHD1O14646 1710 aa19.65■□□□□ 0.74
CISTR-202ENST00000626733 KIF27Q86VH2 1401 aa19.64■□□□□ 0.73
CISTR-202ENST00000626733 EEA1Q15075 1411 aa19.63■□□□□ 0.73
CISTR-202ENST00000626733 FBLN2P98095 1184 aa19.63■□□□□ 0.73
CISTR-202ENST00000626733 TDRD9Q8NDG6 1382 aaKnown RBP19.58■□□□□ 0.73
CISTR-202ENST00000626733 GAPVD1Q14C86 1478 aa19.58■□□□□ 0.72
CISTR-202ENST00000626733 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
CISTR-202ENST00000626733 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
CISTR-202ENST00000626733 PBRM1Q86U86 1689 aa19.53■□□□□ 0.72
CISTR-202ENST00000626733 GRIN2BQ13224 1484 aa19.53■□□□□ 0.72
CISTR-202ENST00000626733 IGF1RP08069 1367 aa19.47■□□□□ 0.71
CISTR-202ENST00000626733 CUL7Q14999 1698 aa19.47■□□□□ 0.71
CISTR-202ENST00000626733 MAGI1Q96QZ7 1491 aaPredicted RBP19.45■□□□□ 0.7
CISTR-202ENST00000626733 CSRNP3Q8WYN3 585 aa19.44■□□□□ 0.7
CISTR-202ENST00000626733 CLASP1Q7Z460 1538 aa19.42■□□□□ 0.7
CISTR-202ENST00000626733 ADAMTS12P58397 1594 aa19.42■□□□□ 0.7
CISTR-202ENST00000626733 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
CISTR-202ENST00000626733 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
CISTR-202ENST00000626733 FAM9AQ8IZU1 332 aaPredicted RBP19.4■□□□□ 0.7
CISTR-202ENST00000626733 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
CISTR-202ENST00000626733 KIF21BO75037 1637 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms