RNA–Protein interactions for RNA: ENST00000626717.1

KCNQ2-212, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 4

Gene KCNQ2, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-212ENST00000626717 NISCHQ9Y2I1 1504 aa28.01■■■□□ 2.07
KCNQ2-212ENST00000626717 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
KCNQ2-212ENST00000626717 ABCC9O60706 1549 aa24.68■■□□□ 1.54
KCNQ2-212ENST00000626717 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
KCNQ2-212ENST00000626717 NACADO15069 1562 aa23.68■■□□□ 1.38
KCNQ2-212ENST00000626717 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
KCNQ2-212ENST00000626717 MYO15BQ96JP2 1530 aa23.53■■□□□ 1.36
KCNQ2-212ENST00000626717 DCAF1Q9Y4B6 1507 aa23.27■■□□□ 1.32
KCNQ2-212ENST00000626717 ZCCHC6Q5VYS8 1495 aaKnown RBP23.25■■□□□ 1.31
KCNQ2-212ENST00000626717 PABPN1Q86U42 306 aaKnown RBP eCLIP23.04■■□□□ 1.28
KCNQ2-212ENST00000626717 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
KCNQ2-212ENST00000626717 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
KCNQ2-212ENST00000626717 UNC13AQ9UPW8 1703 aa22.85■■□□□ 1.25
KCNQ2-212ENST00000626717 BICRAQ9NZM4 1560 aa22.84■■□□□ 1.25
KCNQ2-212ENST00000626717 SCRIBQ14160 1630 aa22.67■■□□□ 1.22
KCNQ2-212ENST00000626717 EIF4G1Q04637 1599 aaKnown RBP22.36■■□□□ 1.17
KCNQ2-212ENST00000626717 CECR2Q9BXF3 1484 aa22.3■■□□□ 1.16
KCNQ2-212ENST00000626717 CC2D2AQ9P2K1 1620 aa22.3■■□□□ 1.16
KCNQ2-212ENST00000626717 NCAPD3P42695 1498 aa21.87■■□□□ 1.09
KCNQ2-212ENST00000626717 SMARCA2P51531 1590 aa21.78■■□□□ 1.08
KCNQ2-212ENST00000626717 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
KCNQ2-212ENST00000626717 ATAD2BQ9ULI0 1458 aa21.76■■□□□ 1.07
KCNQ2-212ENST00000626717 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
KCNQ2-212ENST00000626717 HMGXB3Q12766 1538 aa21.68■■□□□ 1.06
KCNQ2-212ENST00000626717 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
KCNQ2-212ENST00000626717 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
KCNQ2-212ENST00000626717 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
KCNQ2-212ENST00000626717 ERCC6Q03468 1493 aa21.43■■□□□ 1.02
KCNQ2-212ENST00000626717 CUX2O14529 1486 aa21.35■■□□□ 1.01
KCNQ2-212ENST00000626717 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
KCNQ2-212ENST00000626717 PDS5BQ9NTI5 1447 aa21.27■■□□□ 1
KCNQ2-212ENST00000626717 CADPSQ9ULU8 1353 aa21.23■□□□□ 0.99
KCNQ2-212ENST00000626717 RSF1Q96T23 1441 aaPredicted RBP21.22■□□□□ 0.99
KCNQ2-212ENST00000626717 NESP48681 1621 aa21.2■□□□□ 0.98
KCNQ2-212ENST00000626717 WIZO95785 1651 aa21.16■□□□□ 0.98
KCNQ2-212ENST00000626717 TOP2AP11388 1531 aaKnown RBP21.08■□□□□ 0.96
KCNQ2-212ENST00000626717 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
KCNQ2-212ENST00000626717 CFTRP13569 1480 aa21■□□□□ 0.95
KCNQ2-212ENST00000626717 THOC2Q8NI27 1593 aaKnown RBP20.96■□□□□ 0.95
KCNQ2-212ENST00000626717 MRC2Q9UBG0 1479 aa20.95■□□□□ 0.94
KCNQ2-212ENST00000626717 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
KCNQ2-212ENST00000626717 FANCD2Q9BXW9 1451 aa20.91■□□□□ 0.94
KCNQ2-212ENST00000626717 KIF21AQ7Z4S6 1674 aa20.88■□□□□ 0.93
KCNQ2-212ENST00000626717 WDR62O43379 1518 aa20.85■□□□□ 0.93
KCNQ2-212ENST00000626717 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
KCNQ2-212ENST00000626717 ABCC8Q09428 1581 aa20.69■□□□□ 0.9
KCNQ2-212ENST00000626717 URB2Q14146 1524 aaKnown RBP20.63■□□□□ 0.89
KCNQ2-212ENST00000626717 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
KCNQ2-212ENST00000626717 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
KCNQ2-212ENST00000626717 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
KCNQ2-212ENST00000626717 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
KCNQ2-212ENST00000626717 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
KCNQ2-212ENST00000626717 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
KCNQ2-212ENST00000626717 SOGA1O94964 1423 aa20.31■□□□□ 0.84
KCNQ2-212ENST00000626717 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
KCNQ2-212ENST00000626717 ZNF608Q9ULD9 1512 aaPredicted RBP20.3■□□□□ 0.84
KCNQ2-212ENST00000626717 WDR97A6NE52 1622 aa20.26■□□□□ 0.83
KCNQ2-212ENST00000626717 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
KCNQ2-212ENST00000626717 AQRO60306 1485 aaKnown RBP eCLIP20.21■□□□□ 0.83
KCNQ2-212ENST00000626717 FGD5Q6ZNL6 1462 aa20.21■□□□□ 0.83
KCNQ2-212ENST00000626717 EIF4G3O43432 1585 aaKnown RBP20.21■□□□□ 0.83
KCNQ2-212ENST00000626717 CUX1P39880 1505 aa20.17■□□□□ 0.82
KCNQ2-212ENST00000626717 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
KCNQ2-212ENST00000626717 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
KCNQ2-212ENST00000626717 FBLN2P98095 1184 aa20.13■□□□□ 0.81
KCNQ2-212ENST00000626717 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
KCNQ2-212ENST00000626717 WRNQ14191 1432 aaPredicted RBP eCLIP20.11■□□□□ 0.81
KCNQ2-212ENST00000626717 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
KCNQ2-212ENST00000626717 MAGI1Q96QZ7 1491 aaPredicted RBP20.11■□□□□ 0.81
KCNQ2-212ENST00000626717 CHMP7Q8WUX9 453 aaPredicted RBP20.1■□□□□ 0.81
KCNQ2-212ENST00000626717 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
KCNQ2-212ENST00000626717 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
KCNQ2-212ENST00000626717 SNAPC4Q5SXM2 1469 aa20.03■□□□□ 0.8
KCNQ2-212ENST00000626717 SYNJ2O15056 1496 aa20■□□□□ 0.79
KCNQ2-212ENST00000626717 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
KCNQ2-212ENST00000626717 ARHGEF11O15085 1522 aa19.97■□□□□ 0.79
KCNQ2-212ENST00000626717 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
KCNQ2-212ENST00000626717 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
KCNQ2-212ENST00000626717 RIMBP3CA6NJZ7 1639 aa19.91■□□□□ 0.78
KCNQ2-212ENST00000626717 RIMBP3BA6NNM3 1639 aa19.91■□□□□ 0.78
KCNQ2-212ENST00000626717 RIMBP3Q9UFD9 1639 aa19.91■□□□□ 0.78
KCNQ2-212ENST00000626717 CHD1O14646 1710 aa19.91■□□□□ 0.78
KCNQ2-212ENST00000626717 ABCA5Q8WWZ7 1642 aa19.9■□□□□ 0.78
KCNQ2-212ENST00000626717 CYB5RLQ6IPT4 315 aa19.87■□□□□ 0.77
KCNQ2-212ENST00000626717 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
KCNQ2-212ENST00000626717 ERICH3Q5RHP9 1530 aa19.85■□□□□ 0.77
KCNQ2-212ENST00000626717 CLASP1Q7Z460 1538 aa19.83■□□□□ 0.77
KCNQ2-212ENST00000626717 PBRM1Q86U86 1689 aa19.82■□□□□ 0.76
KCNQ2-212ENST00000626717 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
KCNQ2-212ENST00000626717 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
KCNQ2-212ENST00000626717 ARAP1Q96P48 1450 aa19.74■□□□□ 0.75
KCNQ2-212ENST00000626717 NUP160Q12769 1436 aa19.74■□□□□ 0.75
KCNQ2-212ENST00000626717 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
KCNQ2-212ENST00000626717 IGF1RP08069 1367 aa19.64■□□□□ 0.73
KCNQ2-212ENST00000626717 JPH4Q96JJ6 628 aa19.62■□□□□ 0.73
KCNQ2-212ENST00000626717 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
KCNQ2-212ENST00000626717 CEP170Q5SW79 1584 aa19.59■□□□□ 0.73
KCNQ2-212ENST00000626717 CUL7Q14999 1698 aa19.56■□□□□ 0.72
KCNQ2-212ENST00000626717 CARMIL1Q5VZK9 1371 aa19.55■□□□□ 0.72
KCNQ2-212ENST00000626717 PRG4Q92954 1404 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms