RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 DNAJC5Q9H3Z4 198 aa8.93□□□□□ -0.98
SCARNA15.3-201ENST00000626315 DNAJC5BQ9UF47 199 aa8.9□□□□□ -0.98
SCARNA15.3-201ENST00000626315 ABCC9O60706 1549 aa8.59□□□□□ -1.03
SCARNA15.3-201ENST00000626315 TRIM41Q8WV44 630 aa8.23□□□□□ -1.09
SCARNA15.3-201ENST00000626315 NISCHQ9Y2I1 1504 aa8.23□□□□□ -1.09
SCARNA15.3-201ENST00000626315 AEBP2Q6ZN18 517 aaPredicted RBP8.14□□□□□ -1.11
SCARNA15.3-201ENST00000626315 PABPN1Q86U42 306 aaKnown RBP eCLIP7.96□□□□□ -1.14
SCARNA15.3-201ENST00000626315 ILDR1Q86SU0 546 aaPredicted RBP7.86□□□□□ -1.15
SCARNA15.3-201ENST00000626315 CECR2Q9BXF3 1484 aa7.85□□□□□ -1.15
SCARNA15.3-201ENST00000626315 CUX2O14529 1486 aa7.77□□□□□ -1.17
SCARNA15.3-201ENST00000626315 CHIC1Q5VXU3 224 aa7.71□□□□□ -1.18
SCARNA15.3-201ENST00000626315 RB1CC1Q8TDY2 1594 aa7.71□□□□□ -1.18
SCARNA15.3-201ENST00000626315 CC2D2AQ9P2K1 1620 aa7.62□□□□□ -1.19
SCARNA15.3-201ENST00000626315 TRHP20396 242 aaPredicted RBP7.6□□□□□ -1.19
SCARNA15.3-201ENST00000626315 ERCC6Q03468 1493 aa7.55□□□□□ -1.2
SCARNA15.3-201ENST00000626315 DCAF8L2P0C7V8 631 aa7.52□□□□□ -1.21
SCARNA15.3-201ENST00000626315 CCDC180Q9P1Z9 1646 aa7.49□□□□□ -1.21
SCARNA15.3-201ENST00000626315 OSCARQ8IYS5 282 aa7.44□□□□□ -1.22
SCARNA15.3-201ENST00000626315 NACADO15069 1562 aa7.43□□□□□ -1.22
SCARNA15.3-201ENST00000626315 SOCS7O14512 581 aa7.41□□□□□ -1.22
SCARNA15.3-201ENST00000626315 BICRAQ9NZM4 1560 aa7.41□□□□□ -1.22
SCARNA15.3-201ENST00000626315 EIF4G1Q04637 1599 aaKnown RBP7.37□□□□□ -1.23
SCARNA15.3-201ENST00000626315 LMTK3Q96Q04 1460 aa7.36□□□□□ -1.23
SCARNA15.3-201ENST00000626315 CYB5RLQ6IPT4 315 aa7.33□□□□□ -1.24
SCARNA15.3-201ENST00000626315 SHROOM4Q9ULL8 1493 aa7.3□□□□□ -1.24
SCARNA15.3-201ENST00000626315 FBXO41Q8TF61 875 aa7.3□□□□□ -1.24
SCARNA15.3-201ENST00000626315 UNC13AQ9UPW8 1703 aa7.27□□□□□ -1.25
SCARNA15.3-201ENST00000626315 ILDR2Q71H61 639 aa7.22□□□□□ -1.25
SCARNA15.3-201ENST00000626315 DISP3Q9P2K9 1392 aa7.18□□□□□ -1.26
SCARNA15.3-201ENST00000626315 RIMBP3CA6NJZ7 1639 aa7.17□□□□□ -1.26
SCARNA15.3-201ENST00000626315 RIMBP3BA6NNM3 1639 aa7.17□□□□□ -1.26
SCARNA15.3-201ENST00000626315 RIMBP3Q9UFD9 1639 aa7.17□□□□□ -1.26
SCARNA15.3-201ENST00000626315 ARHGEF11O15085 1522 aa7.12□□□□□ -1.27
SCARNA15.3-201ENST00000626315 BAZ1AQ9NRL2 1556 aaPredicted RBP7.12□□□□□ -1.27
SCARNA15.3-201ENST00000626315 KDM4FA0A1W2PPD8 638 aa7.08□□□□□ -1.28
SCARNA15.3-201ENST00000626315 NESP48681 1621 aa7.06□□□□□ -1.28
SCARNA15.3-201ENST00000626315 THOC2Q8NI27 1593 aaKnown RBP7.06□□□□□ -1.28
SCARNA15.3-201ENST00000626315 SMARCA2P51531 1590 aa7.03□□□□□ -1.28
SCARNA15.3-201ENST00000626315 ERCC6L2Q5T890 1561 aa7.02□□□□□ -1.29
SCARNA15.3-201ENST00000626315 SCRIBQ14160 1630 aa7□□□□□ -1.29
SCARNA15.3-201ENST00000626315 MYO15BQ96JP2 1530 aa7□□□□□ -1.29
SCARNA15.3-201ENST00000626315 PDS5BQ9NTI5 1447 aa6.99□□□□□ -1.29
SCARNA15.3-201ENST00000626315 ARAP1Q96P48 1450 aa6.98□□□□□ -1.29
SCARNA15.3-201ENST00000626315 SYNJ2O15056 1496 aa6.92□□□□□ -1.3
SCARNA15.3-201ENST00000626315 NCAPD3P42695 1498 aa6.92□□□□□ -1.3
SCARNA15.3-201ENST00000626315 MRC2Q9UBG0 1479 aa6.9□□□□□ -1.31
SCARNA15.3-201ENST00000626315 HECW2Q9P2P5 1572 aa6.89□□□□□ -1.31
SCARNA15.3-201ENST00000626315 RSF1Q96T23 1441 aaPredicted RBP6.84□□□□□ -1.31
SCARNA15.3-201ENST00000626315 LAMC3Q9Y6N6 1575 aa6.84□□□□□ -1.31
SCARNA15.3-201ENST00000626315 FBLN2P98095 1184 aa6.84□□□□□ -1.31
SCARNA15.3-201ENST00000626315 SENP3Q9H4L4 574 aaPredicted RBP6.84□□□□□ -1.31
SCARNA15.3-201ENST00000626315 WDR62O43379 1518 aa6.83□□□□□ -1.32
SCARNA15.3-201ENST00000626315 PHF23Q9BUL5 403 aaPredicted RBP6.82□□□□□ -1.32
SCARNA15.3-201ENST00000626315 SPATA31D1Q6ZQQ2 1576 aa6.8□□□□□ -1.32
SCARNA15.3-201ENST00000626315 KIF21AQ7Z4S6 1674 aa6.8□□□□□ -1.32
SCARNA15.3-201ENST00000626315 CERKQ8TCT0 537 aa6.77□□□□□ -1.33
SCARNA15.3-201ENST00000626315 ATAD2BQ9ULI0 1458 aa6.75□□□□□ -1.33
SCARNA15.3-201ENST00000626315 ADGRL1O94910 1474 aa6.74□□□□□ -1.33
SCARNA15.3-201ENST00000626315 FAM69CQ0P6D2 419 aa6.73□□□□□ -1.33
SCARNA15.3-201ENST00000626315 CADPSQ9ULU8 1353 aa6.72□□□□□ -1.33
SCARNA15.3-201ENST00000626315 CEP164Q9UPV0 1460 aa6.69□□□□□ -1.34
SCARNA15.3-201ENST00000626315 HMGXB3Q12766 1538 aa6.69□□□□□ -1.34
SCARNA15.3-201ENST00000626315 BAZ1BQ9UIG0 1483 aaKnown RBP6.66□□□□□ -1.34
SCARNA15.3-201ENST00000626315 GAPVD1Q14C86 1478 aa6.65□□□□□ -1.35
SCARNA15.3-201ENST00000626315 ZNF608Q9ULD9 1512 aaPredicted RBP6.64□□□□□ -1.35
SCARNA15.3-201ENST00000626315 KDM6BO15054 1643 aa6.64□□□□□ -1.35
SCARNA15.3-201ENST00000626315 NPM1P06748 294 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCARNA15.3-201ENST00000626315 CHMP7Q8WUX9 453 aaPredicted RBP6.61□□□□□ -1.35
SCARNA15.3-201ENST00000626315 IFT140Q96RY7 1462 aa6.6□□□□□ -1.35
SCARNA15.3-201ENST00000626315 FANCD2Q9BXW9 1451 aa6.6□□□□□ -1.35
SCARNA15.3-201ENST00000626315 IFFO2Q5TF58 517 aa6.56□□□□□ -1.36
SCARNA15.3-201ENST00000626315 DCAF1Q9Y4B6 1507 aa6.55□□□□□ -1.36
SCARNA15.3-201ENST00000626315 ABCC10Q5T3U5 1492 aa6.54□□□□□ -1.36
SCARNA15.3-201ENST00000626315 URB2Q14146 1524 aaKnown RBP6.54□□□□□ -1.36
SCARNA15.3-201ENST00000626315 CHD1O14646 1710 aa6.53□□□□□ -1.36
SCARNA15.3-201ENST00000626315 AQRO60306 1485 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCARNA15.3-201ENST00000626315 SMARCA4P51532 1647 aa6.52□□□□□ -1.37
SCARNA15.3-201ENST00000626315 CLASP1Q7Z460 1538 aa6.5□□□□□ -1.37
SCARNA15.3-201ENST00000626315 TOP2BQ02880 1626 aa6.5□□□□□ -1.37
SCARNA15.3-201ENST00000626315 SYNJ1O43426 1573 aa6.5□□□□□ -1.37
SCARNA15.3-201ENST00000626315 KIF13AQ9H1H9 1805 aa6.5□□□□□ -1.37
SCARNA15.3-201ENST00000626315 HSPA2P54652 639 aa6.49□□□□□ -1.37
SCARNA15.3-201ENST00000626315 EIF4G3O43432 1585 aaKnown RBP6.46□□□□□ -1.38
SCARNA15.3-201ENST00000626315 DMRT2Q9Y5R5 561 aa6.46□□□□□ -1.38
SCARNA15.3-201ENST00000626315 FOXD1Q16676 465 aa6.44□□□□□ -1.38
SCARNA15.3-201ENST00000626315 ZCCHC6Q5VYS8 1495 aaKnown RBP6.43□□□□□ -1.38
SCARNA15.3-201ENST00000626315 PCF11O94913 1555 aaKnown RBP6.42□□□□□ -1.38
SCARNA15.3-201ENST00000626315 UBAP1LF5GYI3 381 aa6.41□□□□□ -1.38
SCARNA15.3-201ENST00000626315 PTPRMP28827 1452 aa6.4□□□□□ -1.39
SCARNA15.3-201ENST00000626315 SNAPC4Q5SXM2 1469 aa6.39□□□□□ -1.39
SCARNA15.3-201ENST00000626315 DIP2BQ9P265 1576 aa6.39□□□□□ -1.39
SCARNA15.3-201ENST00000626315 PLPPR3Q6T4P5 718 aa6.38□□□□□ -1.39
SCARNA15.3-201ENST00000626315 TDRD9Q8NDG6 1382 aaKnown RBP6.38□□□□□ -1.39
SCARNA15.3-201ENST00000626315 CFTRP13569 1480 aa6.38□□□□□ -1.39
SCARNA15.3-201ENST00000626315 TSPOAP1O95153 1857 aa6.38□□□□□ -1.39
SCARNA15.3-201ENST00000626315 MAPKBP1O60336 1514 aa6.36□□□□□ -1.39
SCARNA15.3-201ENST00000626315 SCAF1Q9H7N4 1312 aaKnown RBP6.36□□□□□ -1.39
SCARNA15.3-201ENST00000626315 MED1Q15648 1581 aaPredicted RBP6.35□□□□□ -1.39
SCARNA15.3-201ENST00000626315 HSPA1LP34931 641 aa6.35□□□□□ -1.39
SCARNA15.3-201ENST00000626315 COL17A1Q9UMD9 1497 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms