RNA–Protein interactions for RNA: ENST00000626177.2

CCDC163-202, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-202ENST00000626177 NISCHQ9Y2I1 1504 aa20.36■□□□□ 0.85
CCDC163-202ENST00000626177 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
CCDC163-202ENST00000626177 ZCCHC6Q5VYS8 1495 aaKnown RBP17.1■□□□□ 0.33
CCDC163-202ENST00000626177 DCAF8L2P0C7V8 631 aa16.98■□□□□ 0.31
CCDC163-202ENST00000626177 SHROOM4Q9ULL8 1493 aa16.92■□□□□ 0.3
CCDC163-202ENST00000626177 ABCC9O60706 1549 aa16.73■□□□□ 0.27
CCDC163-202ENST00000626177 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.26
CCDC163-202ENST00000626177 MYO15BQ96JP2 1530 aa16.42■□□□□ 0.22
CCDC163-202ENST00000626177 NACADO15069 1562 aa16.36■□□□□ 0.21
CCDC163-202ENST00000626177 SCRIBQ14160 1630 aa16.35■□□□□ 0.21
CCDC163-202ENST00000626177 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
CCDC163-202ENST00000626177 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
CCDC163-202ENST00000626177 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
CCDC163-202ENST00000626177 CECR2Q9BXF3 1484 aa15.93■□□□□ 0.14
CCDC163-202ENST00000626177 RSF1Q96T23 1441 aaPredicted RBP15.89■□□□□ 0.13
CCDC163-202ENST00000626177 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
CCDC163-202ENST00000626177 BICRAQ9NZM4 1560 aa15.82■□□□□ 0.12
CCDC163-202ENST00000626177 MROH2BQ7Z745 1585 aa15.8■□□□□ 0.12
CCDC163-202ENST00000626177 CHIC1Q5VXU3 224 aa15.76■□□□□ 0.11
CCDC163-202ENST00000626177 WIZO95785 1651 aa15.69■□□□□ 0.1
CCDC163-202ENST00000626177 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
CCDC163-202ENST00000626177 SMARCA4P51532 1647 aa15.61■□□□□ 0.09
CCDC163-202ENST00000626177 SLC24A1O60721 1099 aa15.47■□□□□ 0.07
CCDC163-202ENST00000626177 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
CCDC163-202ENST00000626177 CCDC88BA6NC98 1476 aa15.36■□□□□ 0.05
CCDC163-202ENST00000626177 ATAD2BQ9ULI0 1458 aa15.35■□□□□ 0.05
CCDC163-202ENST00000626177 PEG3Q9GZU2 1588 aa15.34■□□□□ 0.05
CCDC163-202ENST00000626177 SMARCA2P51531 1590 aa15.33■□□□□ 0.04
CCDC163-202ENST00000626177 EIF4G1Q04637 1599 aaKnown RBP15.3■□□□□ 0.04
CCDC163-202ENST00000626177 BAZ1BQ9UIG0 1483 aaKnown RBP15.25■□□□□ 0.03
CCDC163-202ENST00000626177 TRIM41Q8WV44 630 aa15.25■□□□□ 0.03
CCDC163-202ENST00000626177 LOC105371045A0A1W2PR82 267 aa15.16■□□□□ 0.02
CCDC163-202ENST00000626177 NCAPD3P42695 1498 aa15.15■□□□□ 0.02
CCDC163-202ENST00000626177 ABCC8Q09428 1581 aa15.13■□□□□ 0.01
CCDC163-202ENST00000626177 FAM9AQ8IZU1 332 aaPredicted RBP15.11■□□□□ 0.01
CCDC163-202ENST00000626177 HMGXB3Q12766 1538 aa15.08■□□□□ 0
CCDC163-202ENST00000626177 CC2D2AQ9P2K1 1620 aa15.07■□□□□ 0
CCDC163-202ENST00000626177 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
CCDC163-202ENST00000626177 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
CCDC163-202ENST00000626177 DNAJC5BQ9UF47 199 aa14.9□□□□□ -0.02
CCDC163-202ENST00000626177 SYNJ1O43426 1573 aa14.9□□□□□ -0.02
CCDC163-202ENST00000626177 SOGA1O94964 1423 aa14.88□□□□□ -0.03
CCDC163-202ENST00000626177 CFTRP13569 1480 aa14.87□□□□□ -0.03
CCDC163-202ENST00000626177 RUSC2Q8N2Y8 1516 aa14.86□□□□□ -0.03
CCDC163-202ENST00000626177 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.04
CCDC163-202ENST00000626177 CADPSQ9ULU8 1353 aa14.81□□□□□ -0.04
CCDC163-202ENST00000626177 NESP48681 1621 aa14.75□□□□□ -0.05
CCDC163-202ENST00000626177 CUX1P39880 1505 aa14.75□□□□□ -0.05
CCDC163-202ENST00000626177 TOP2BQ02880 1626 aa14.74□□□□□ -0.05
CCDC163-202ENST00000626177 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
CCDC163-202ENST00000626177 BIVM-ERCC5R4GMW8 1640 aa14.71□□□□□ -0.05
CCDC163-202ENST00000626177 PRDM2Q13029 1718 aa14.7□□□□□ -0.06
CCDC163-202ENST00000626177 EEA1Q15075 1411 aa14.66□□□□□ -0.06
CCDC163-202ENST00000626177 FANCD2Q9BXW9 1451 aa14.65□□□□□ -0.06
CCDC163-202ENST00000626177 UBTFP17480 764 aaKnown RBP14.6□□□□□ -0.07
CCDC163-202ENST00000626177 LAMC3Q9Y6N6 1575 aa14.57□□□□□ -0.08
CCDC163-202ENST00000626177 FGD5Q6ZNL6 1462 aa14.55□□□□□ -0.08
CCDC163-202ENST00000626177 PCGF6Q9BYE7 350 aa14.55□□□□□ -0.08
CCDC163-202ENST00000626177 TNIKQ9UKE5 1360 aa14.55□□□□□ -0.08
CCDC163-202ENST00000626177 GOLGA3Q08378 1498 aa14.55□□□□□ -0.08
CCDC163-202ENST00000626177 RAPGEF2Q9Y4G8 1499 aa14.53□□□□□ -0.08
CCDC163-202ENST00000626177 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.08
CCDC163-202ENST00000626177 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
CCDC163-202ENST00000626177 KIF21BO75037 1637 aa14.51□□□□□ -0.09
CCDC163-202ENST00000626177 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
CCDC163-202ENST00000626177 KIF27Q86VH2 1401 aa14.5□□□□□ -0.09
CCDC163-202ENST00000626177 PPARGC1BQ86YN6 1023 aaKnown RBP14.5□□□□□ -0.09
CCDC163-202ENST00000626177 URB2Q14146 1524 aaKnown RBP14.5□□□□□ -0.09
CCDC163-202ENST00000626177 CUX2O14529 1486 aa14.49□□□□□ -0.09
CCDC163-202ENST00000626177 RAD54L2Q9Y4B4 1467 aa14.49□□□□□ -0.09
CCDC163-202ENST00000626177 DNMBPQ6XZF7 1577 aa14.49□□□□□ -0.09
CCDC163-202ENST00000626177 PDS5BQ9NTI5 1447 aa14.48□□□□□ -0.09
CCDC163-202ENST00000626177 KIF21AQ7Z4S6 1674 aa14.48□□□□□ -0.09
CCDC163-202ENST00000626177 RANGAP1P46060 587 aaPredicted RBP14.46□□□□□ -0.09
CCDC163-202ENST00000626177 POLA1P09884 1462 aaPredicted RBP14.46□□□□□ -0.09
CCDC163-202ENST00000626177 PRXQ9BXM0 1461 aa14.46□□□□□ -0.09
CCDC163-202ENST00000626177 IGF1RP08069 1367 aa14.44□□□□□ -0.1
CCDC163-202ENST00000626177 TRIM26Q12899 539 aaPredicted RBP14.39□□□□□ -0.11
CCDC163-202ENST00000626177 ERICH3Q5RHP9 1530 aa14.37□□□□□ -0.11
CCDC163-202ENST00000626177 ABCA10Q8WWZ4 1543 aa14.37□□□□□ -0.11
CCDC163-202ENST00000626177 CLIP1P30622 1438 aa14.37□□□□□ -0.11
CCDC163-202ENST00000626177 CARMIL1Q5VZK9 1371 aa14.35□□□□□ -0.11
CCDC163-202ENST00000626177 TTBK1Q5TCY1 1321 aaPredicted RBP14.34□□□□□ -0.11
CCDC163-202ENST00000626177 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
CCDC163-202ENST00000626177 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
CCDC163-202ENST00000626177 PLPPR3Q6T4P5 718 aa14.3□□□□□ -0.12
CCDC163-202ENST00000626177 WDR97A6NE52 1622 aa14.3□□□□□ -0.12
CCDC163-202ENST00000626177 TARBP1Q13395 1621 aaKnown RBP14.27□□□□□ -0.12
CCDC163-202ENST00000626177 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
CCDC163-202ENST00000626177 ABCA5Q8WWZ7 1642 aa14.24□□□□□ -0.13
CCDC163-202ENST00000626177 GAPVD1Q14C86 1478 aa14.24□□□□□ -0.13
CCDC163-202ENST00000626177 ARAP1Q96P48 1450 aa14.24□□□□□ -0.13
CCDC163-202ENST00000626177 PHF23Q9BUL5 403 aaPredicted RBP14.23□□□□□ -0.13
CCDC163-202ENST00000626177 AQRO60306 1485 aaKnown RBP eCLIP14.23□□□□□ -0.138e-11■■■■□ 25.5
CCDC163-202ENST00000626177 VPS8Q8N3P4 1428 aa14.23□□□□□ -0.13
CCDC163-202ENST00000626177 WDR62O43379 1518 aa14.21□□□□□ -0.13
CCDC163-202ENST00000626177 ARHGAP35Q9NRY4 1499 aa14.2□□□□□ -0.14
CCDC163-202ENST00000626177 ZNF608Q9ULD9 1512 aaPredicted RBP14.19□□□□□ -0.14
CCDC163-202ENST00000626177 CUL7Q14999 1698 aa14.17□□□□□ -0.14
CCDC163-202ENST00000626177 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms