RNA–Protein interactions for RNA: ENST00000625904.2

HAVCR1-206, Transcript of hepatitis A virus cellular receptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HAVCR1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HAVCR1-206ENST00000625904 NISCHQ9Y2I1 1504 aa24.99■■□□□ 1.59
HAVCR1-206ENST00000625904 CCDC180Q9P1Z9 1646 aa22.16■■□□□ 1.14
HAVCR1-206ENST00000625904 ABCC9O60706 1549 aa21.6■■□□□ 1.05
HAVCR1-206ENST00000625904 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
HAVCR1-206ENST00000625904 NACADO15069 1562 aa20.81■□□□□ 0.92
HAVCR1-206ENST00000625904 DCAF8L2P0C7V8 631 aa20.81■□□□□ 0.92
HAVCR1-206ENST00000625904 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
HAVCR1-206ENST00000625904 MYO15BQ96JP2 1530 aa20.74■□□□□ 0.91
HAVCR1-206ENST00000625904 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
HAVCR1-206ENST00000625904 UNC13AQ9UPW8 1703 aa20.4■□□□□ 0.86
HAVCR1-206ENST00000625904 SCRIBQ14160 1630 aa20.23■□□□□ 0.83
HAVCR1-206ENST00000625904 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
HAVCR1-206ENST00000625904 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
HAVCR1-206ENST00000625904 SHROOM4Q9ULL8 1493 aa19.97■□□□□ 0.79
HAVCR1-206ENST00000625904 DNAJC5BQ9UF47 199 aa19.81■□□□□ 0.76
HAVCR1-206ENST00000625904 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
HAVCR1-206ENST00000625904 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
HAVCR1-206ENST00000625904 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
HAVCR1-206ENST00000625904 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
HAVCR1-206ENST00000625904 BAZ1AQ9NRL2 1556 aaPredicted RBP19.35■□□□□ 0.69
HAVCR1-206ENST00000625904 MROH2BQ7Z745 1585 aa19.27■□□□□ 0.68
HAVCR1-206ENST00000625904 ATAD2BQ9ULI0 1458 aa19.25■□□□□ 0.67
HAVCR1-206ENST00000625904 NCAPD3P42695 1498 aa19.23■□□□□ 0.67
HAVCR1-206ENST00000625904 SMARCA2P51531 1590 aa19.21■□□□□ 0.67
HAVCR1-206ENST00000625904 PEG3Q9GZU2 1588 aa19.2■□□□□ 0.66
HAVCR1-206ENST00000625904 HMGXB3Q12766 1538 aa19.12■□□□□ 0.65
HAVCR1-206ENST00000625904 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
HAVCR1-206ENST00000625904 BAZ1BQ9UIG0 1483 aaKnown RBP19.07■□□□□ 0.64
HAVCR1-206ENST00000625904 WIZO95785 1651 aa19.07■□□□□ 0.64
HAVCR1-206ENST00000625904 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
HAVCR1-206ENST00000625904 NESP48681 1621 aa18.75■□□□□ 0.59
HAVCR1-206ENST00000625904 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
HAVCR1-206ENST00000625904 CADPSQ9ULU8 1353 aa18.66■□□□□ 0.58
HAVCR1-206ENST00000625904 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
HAVCR1-206ENST00000625904 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
HAVCR1-206ENST00000625904 CFTRP13569 1480 aa18.58■□□□□ 0.57
HAVCR1-206ENST00000625904 ERCC6Q03468 1493 aa18.58■□□□□ 0.57
HAVCR1-206ENST00000625904 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
HAVCR1-206ENST00000625904 KIF21AQ7Z4S6 1674 aa18.52■□□□□ 0.55
HAVCR1-206ENST00000625904 FANCD2Q9BXW9 1451 aa18.44■□□□□ 0.54
HAVCR1-206ENST00000625904 PRDM2Q13029 1718 aa18.43■□□□□ 0.54
HAVCR1-206ENST00000625904 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
HAVCR1-206ENST00000625904 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
HAVCR1-206ENST00000625904 CUX2O14529 1486 aa18.36■□□□□ 0.53
HAVCR1-206ENST00000625904 MRC2Q9UBG0 1479 aa18.35■□□□□ 0.53
HAVCR1-206ENST00000625904 WDR62O43379 1518 aa18.31■□□□□ 0.52
HAVCR1-206ENST00000625904 URB2Q14146 1524 aaKnown RBP18.26■□□□□ 0.51
HAVCR1-206ENST00000625904 TOPBP1Q92547 1522 aa18.17■□□□□ 0.5
HAVCR1-206ENST00000625904 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
HAVCR1-206ENST00000625904 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
HAVCR1-206ENST00000625904 CUX1P39880 1505 aa18.07■□□□□ 0.48
HAVCR1-206ENST00000625904 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
HAVCR1-206ENST00000625904 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
HAVCR1-206ENST00000625904 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
HAVCR1-206ENST00000625904 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
HAVCR1-206ENST00000625904 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
HAVCR1-206ENST00000625904 ZNF608Q9ULD9 1512 aaPredicted RBP17.95■□□□□ 0.46
HAVCR1-206ENST00000625904 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
HAVCR1-206ENST00000625904 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
HAVCR1-206ENST00000625904 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
HAVCR1-206ENST00000625904 SOGA1O94964 1423 aa17.93■□□□□ 0.46
HAVCR1-206ENST00000625904 BIVM-ERCC5R4GMW8 1640 aa17.93■□□□□ 0.46
HAVCR1-206ENST00000625904 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
HAVCR1-206ENST00000625904 AQRO60306 1485 aaKnown RBP eCLIP17.86■□□□□ 0.45
HAVCR1-206ENST00000625904 TDRD9Q8NDG6 1382 aaKnown RBP17.84■□□□□ 0.45
HAVCR1-206ENST00000625904 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
HAVCR1-206ENST00000625904 ABCA10Q8WWZ4 1543 aa17.82■□□□□ 0.44
HAVCR1-206ENST00000625904 ABCA5Q8WWZ7 1642 aa17.74■□□□□ 0.43
HAVCR1-206ENST00000625904 DNAJC5Q9H3Z4 198 aa17.73■□□□□ 0.43
HAVCR1-206ENST00000625904 GAPVD1Q14C86 1478 aa17.73■□□□□ 0.43
HAVCR1-206ENST00000625904 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
HAVCR1-206ENST00000625904 PBRM1Q86U86 1689 aa17.69■□□□□ 0.42
HAVCR1-206ENST00000625904 SNAPC4Q5SXM2 1469 aa17.67■□□□□ 0.42
HAVCR1-206ENST00000625904 MAGI1Q96QZ7 1491 aaPredicted RBP17.65■□□□□ 0.42
HAVCR1-206ENST00000625904 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
HAVCR1-206ENST00000625904 CHD1O14646 1710 aa17.63■□□□□ 0.41
HAVCR1-206ENST00000625904 ERICH3Q5RHP9 1530 aa17.6■□□□□ 0.41
HAVCR1-206ENST00000625904 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
HAVCR1-206ENST00000625904 FBLN2P98095 1184 aa17.59■□□□□ 0.41
HAVCR1-206ENST00000625904 SYNJ2O15056 1496 aa17.59■□□□□ 0.41
HAVCR1-206ENST00000625904 KIF27Q86VH2 1401 aa17.58■□□□□ 0.4
HAVCR1-206ENST00000625904 CHMP7Q8WUX9 453 aaPredicted RBP17.56■□□□□ 0.4
HAVCR1-206ENST00000625904 ADAMTS12P58397 1594 aa17.55■□□□□ 0.4
HAVCR1-206ENST00000625904 IGF1RP08069 1367 aa17.54■□□□□ 0.4
HAVCR1-206ENST00000625904 FHAD1B1AJZ9 1412 aa17.52■□□□□ 0.4
HAVCR1-206ENST00000625904 RUSC2Q8N2Y8 1516 aa17.49■□□□□ 0.39
HAVCR1-206ENST00000625904 GRIN2AQ12879 1464 aa17.49■□□□□ 0.39
HAVCR1-206ENST00000625904 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
HAVCR1-206ENST00000625904 CUL7Q14999 1698 aa17.44■□□□□ 0.38
HAVCR1-206ENST00000625904 CLASP1Q7Z460 1538 aa17.44■□□□□ 0.38
HAVCR1-206ENST00000625904 NUP160Q12769 1436 aa17.42■□□□□ 0.38
HAVCR1-206ENST00000625904 CEP170Q5SW79 1584 aa17.41■□□□□ 0.38
HAVCR1-206ENST00000625904 CARMIL1Q5VZK9 1371 aa17.41■□□□□ 0.38
HAVCR1-206ENST00000625904 ARHGEF11O15085 1522 aa17.36■□□□□ 0.37
HAVCR1-206ENST00000625904 RIMBP3CA6NJZ7 1639 aa17.35■□□□□ 0.37
HAVCR1-206ENST00000625904 RIMBP3BA6NNM3 1639 aa17.35■□□□□ 0.37
HAVCR1-206ENST00000625904 RIMBP3Q9UFD9 1639 aa17.35■□□□□ 0.37
HAVCR1-206ENST00000625904 RAPGEF2Q9Y4G8 1499 aa17.3■□□□□ 0.36
HAVCR1-206ENST00000625904 PRXQ9BXM0 1461 aa17.3■□□□□ 0.36
HAVCR1-206ENST00000625904 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms