RNA–Protein interactions for RNA: ENST00000624930.1

SMG6-IT1-201, SMG6 intronic transcript 1, humanhuman

BASIC

Gene SMG6-IT1, Length 374 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-IT1-201ENST00000624930 NISCHQ9Y2I1 1504 aa22.02■■□□□ 1.12
SMG6-IT1-201ENST00000624930 CCDC180Q9P1Z9 1646 aa19.13■□□□□ 0.65
SMG6-IT1-201ENST00000624930 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
SMG6-IT1-201ENST00000624930 DCAF1Q9Y4B6 1507 aa18.34■□□□□ 0.53
SMG6-IT1-201ENST00000624930 MYO15BQ96JP2 1530 aa18.12■□□□□ 0.49
SMG6-IT1-201ENST00000624930 DCAF8L2P0C7V8 631 aa17.94■□□□□ 0.46
SMG6-IT1-201ENST00000624930 NACADO15069 1562 aa17.83■□□□□ 0.45
SMG6-IT1-201ENST00000624930 ABCC9O60706 1549 aa17.82■□□□□ 0.44
SMG6-IT1-201ENST00000624930 SHROOM4Q9ULL8 1493 aa17.81■□□□□ 0.44
SMG6-IT1-201ENST00000624930 RB1CC1Q8TDY2 1594 aa17.59■□□□□ 0.41
SMG6-IT1-201ENST00000624930 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
SMG6-IT1-201ENST00000624930 SUPT5HO00267 1087 aaKnown RBP17.28■□□□□ 0.36
SMG6-IT1-201ENST00000624930 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
SMG6-IT1-201ENST00000624930 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
SMG6-IT1-201ENST00000624930 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.31
SMG6-IT1-201ENST00000624930 CECR2Q9BXF3 1484 aa17.01■□□□□ 0.31
SMG6-IT1-201ENST00000624930 BAZ1AQ9NRL2 1556 aaPredicted RBP16.99■□□□□ 0.31
SMG6-IT1-201ENST00000624930 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
SMG6-IT1-201ENST00000624930 SMARCA4P51532 1647 aa16.84■□□□□ 0.29
SMG6-IT1-201ENST00000624930 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMG6-IT1-201ENST00000624930 CHIC1Q5VXU3 224 aa16.75■□□□□ 0.27
SMG6-IT1-201ENST00000624930 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
SMG6-IT1-201ENST00000624930 WIZO95785 1651 aa16.74■□□□□ 0.27
SMG6-IT1-201ENST00000624930 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
SMG6-IT1-201ENST00000624930 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
SMG6-IT1-201ENST00000624930 ATAD2BQ9ULI0 1458 aa16.58■□□□□ 0.24
SMG6-IT1-201ENST00000624930 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
SMG6-IT1-201ENST00000624930 NCAPD3P42695 1498 aa16.49■□□□□ 0.23
SMG6-IT1-201ENST00000624930 EIF4G1Q04637 1599 aaKnown RBP16.48■□□□□ 0.23
SMG6-IT1-201ENST00000624930 BAZ1BQ9UIG0 1483 aaKnown RBP16.45■□□□□ 0.22
SMG6-IT1-201ENST00000624930 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
SMG6-IT1-201ENST00000624930 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
SMG6-IT1-201ENST00000624930 CC2D2AQ9P2K1 1620 aa16.17■□□□□ 0.18
SMG6-IT1-201ENST00000624930 CFTRP13569 1480 aa16.12■□□□□ 0.17
SMG6-IT1-201ENST00000624930 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
SMG6-IT1-201ENST00000624930 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
SMG6-IT1-201ENST00000624930 EEA1Q15075 1411 aa16.07■□□□□ 0.16
SMG6-IT1-201ENST00000624930 CADPSQ9ULU8 1353 aa16.04■□□□□ 0.16
SMG6-IT1-201ENST00000624930 LOC105371045A0A1W2PR82 267 aa16■□□□□ 0.15
SMG6-IT1-201ENST00000624930 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
SMG6-IT1-201ENST00000624930 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
SMG6-IT1-201ENST00000624930 AEBP2Q6ZN18 517 aaPredicted RBP15.92■□□□□ 0.14
SMG6-IT1-201ENST00000624930 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
SMG6-IT1-201ENST00000624930 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
SMG6-IT1-201ENST00000624930 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
SMG6-IT1-201ENST00000624930 SOGA1O94964 1423 aa15.88■□□□□ 0.13
SMG6-IT1-201ENST00000624930 FAM9AQ8IZU1 332 aaPredicted RBP15.88■□□□□ 0.13
SMG6-IT1-201ENST00000624930 CUX1P39880 1505 aa15.84■□□□□ 0.13
SMG6-IT1-201ENST00000624930 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
SMG6-IT1-201ENST00000624930 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
SMG6-IT1-201ENST00000624930 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
SMG6-IT1-201ENST00000624930 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
SMG6-IT1-201ENST00000624930 CEP164Q9UPV0 1460 aa15.75■□□□□ 0.11
SMG6-IT1-201ENST00000624930 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
SMG6-IT1-201ENST00000624930 KIF21BO75037 1637 aa15.74■□□□□ 0.11
SMG6-IT1-201ENST00000624930 PDS5BQ9NTI5 1447 aa15.74■□□□□ 0.11
SMG6-IT1-201ENST00000624930 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
SMG6-IT1-201ENST00000624930 DNMBPQ6XZF7 1577 aa15.69■□□□□ 0.1
SMG6-IT1-201ENST00000624930 NESP48681 1621 aa15.68■□□□□ 0.1
SMG6-IT1-201ENST00000624930 PRXQ9BXM0 1461 aa15.66■□□□□ 0.1
SMG6-IT1-201ENST00000624930 ERICH3Q5RHP9 1530 aa15.65■□□□□ 0.1
SMG6-IT1-201ENST00000624930 TOPBP1Q92547 1522 aa15.64■□□□□ 0.09
SMG6-IT1-201ENST00000624930 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
SMG6-IT1-201ENST00000624930 FGD5Q6ZNL6 1462 aa15.64■□□□□ 0.09
SMG6-IT1-201ENST00000624930 CEP162Q5TB80 1403 aa15.6■□□□□ 0.09
SMG6-IT1-201ENST00000624930 ABCA10Q8WWZ4 1543 aa15.59■□□□□ 0.09
SMG6-IT1-201ENST00000624930 UBTFP17480 764 aaKnown RBP15.59■□□□□ 0.09
SMG6-IT1-201ENST00000624930 IGF1RP08069 1367 aa15.58■□□□□ 0.08
SMG6-IT1-201ENST00000624930 URB2Q14146 1524 aaKnown RBP15.57■□□□□ 0.08
SMG6-IT1-201ENST00000624930 CUX2O14529 1486 aa15.56■□□□□ 0.08
SMG6-IT1-201ENST00000624930 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
SMG6-IT1-201ENST00000624930 RAPGEF2Q9Y4G8 1499 aa15.56■□□□□ 0.08
SMG6-IT1-201ENST00000624930 TRIM26Q12899 539 aaPredicted RBP15.53■□□□□ 0.08
SMG6-IT1-201ENST00000624930 EHMT2Q96KQ7 1210 aa15.51■□□□□ 0.07
SMG6-IT1-201ENST00000624930 MRC2Q9UBG0 1479 aa15.48■□□□□ 0.07
SMG6-IT1-201ENST00000624930 CARMIL1Q5VZK9 1371 aa15.48■□□□□ 0.07
SMG6-IT1-201ENST00000624930 CLIP1P30622 1438 aa15.46■□□□□ 0.07
SMG6-IT1-201ENST00000624930 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.06
SMG6-IT1-201ENST00000624930 KIF21AQ7Z4S6 1674 aa15.45■□□□□ 0.06
SMG6-IT1-201ENST00000624930 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
SMG6-IT1-201ENST00000624930 PCGF6Q9BYE7 350 aa15.41■□□□□ 0.06
SMG6-IT1-201ENST00000624930 WDR62O43379 1518 aa15.39■□□□□ 0.05
SMG6-IT1-201ENST00000624930 CUL7Q14999 1698 aa15.39■□□□□ 0.05
SMG6-IT1-201ENST00000624930 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
SMG6-IT1-201ENST00000624930 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
SMG6-IT1-201ENST00000624930 VPS8Q8N3P4 1428 aa15.38■□□□□ 0.05
SMG6-IT1-201ENST00000624930 GAPVD1Q14C86 1478 aa15.37■□□□□ 0.05
SMG6-IT1-201ENST00000624930 IFT140Q96RY7 1462 aa15.35■□□□□ 0.05
SMG6-IT1-201ENST00000624930 TDRD9Q8NDG6 1382 aaKnown RBP15.32■□□□□ 0.04
SMG6-IT1-201ENST00000624930 ERCC6Q03468 1493 aa15.28■□□□□ 0.04
SMG6-IT1-201ENST00000624930 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
SMG6-IT1-201ENST00000624930 ARHGAP35Q9NRY4 1499 aa15.27■□□□□ 0.03
SMG6-IT1-201ENST00000624930 GRIN2BQ13224 1484 aa15.26■□□□□ 0.03
SMG6-IT1-201ENST00000624930 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
SMG6-IT1-201ENST00000624930 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
SMG6-IT1-201ENST00000624930 EFCAB5A4FU69 1503 aa15.22■□□□□ 0.03
SMG6-IT1-201ENST00000624930 APLP2Q06481 763 aa15.21■□□□□ 0.03
SMG6-IT1-201ENST00000624930 MAP3K1Q13233 1512 aa15.21■□□□□ 0.03
SMG6-IT1-201ENST00000624930 HRCP23327 699 aa15.19■□□□□ 0.02
SMG6-IT1-201ENST00000624930 AQRO60306 1485 aaKnown RBP eCLIP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms