RNA–Protein interactions for RNA: ENST00000624362.1

CCL2-204, Transcript of C-C motif chemokine ligand 2, humanhuman

Gene CCL2, Length 992 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2-204ENST00000624362 NISCHQ9Y2I1 1504 aa16.82■□□□□ 0.28
CCL2-204ENST00000624362 AEBP2Q6ZN18 517 aaPredicted RBP15.06■□□□□ 0
CCL2-204ENST00000624362 CHIC1Q5VXU3 224 aa14.85□□□□□ -0.03
CCL2-204ENST00000624362 CCDC180Q9P1Z9 1646 aa14.74□□□□□ -0.05
CCL2-204ENST00000624362 ZCCHC6Q5VYS8 1495 aaKnown RBP14.09□□□□□ -0.15
CCL2-204ENST00000624362 DCAF8L2P0C7V8 631 aa14.05□□□□□ -0.16
CCL2-204ENST00000624362 ABCC9O60706 1549 aa14.05□□□□□ -0.16
CCL2-204ENST00000624362 DCAF1Q9Y4B6 1507 aa13.94□□□□□ -0.18
CCL2-204ENST00000624362 MYO15BQ96JP2 1530 aa13.84□□□□□ -0.19
CCL2-204ENST00000624362 NACADO15069 1562 aa13.8□□□□□ -0.2
CCL2-204ENST00000624362 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
CCL2-204ENST00000624362 SHROOM4Q9ULL8 1493 aa13.62□□□□□ -0.23
CCL2-204ENST00000624362 SCRIBQ14160 1630 aa13.5□□□□□ -0.25
CCL2-204ENST00000624362 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
CCL2-204ENST00000624362 PABPN1Q86U42 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCL2-204ENST00000624362 BICRAQ9NZM4 1560 aa13.17□□□□□ -0.3
CCL2-204ENST00000624362 SUPT5HO00267 1087 aaKnown RBP13.12□□□□□ -0.31
CCL2-204ENST00000624362 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
CCL2-204ENST00000624362 BAZ1AQ9NRL2 1556 aaPredicted RBP13.04□□□□□ -0.32
CCL2-204ENST00000624362 CECR2Q9BXF3 1484 aa13.03□□□□□ -0.32
CCL2-204ENST00000624362 RSF1Q96T23 1441 aaPredicted RBP12.98□□□□□ -0.33
CCL2-204ENST00000624362 MROH2BQ7Z745 1585 aa12.94□□□□□ -0.34
CCL2-204ENST00000624362 SMARCA4P51532 1647 aa12.94□□□□□ -0.34
CCL2-204ENST00000624362 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
CCL2-204ENST00000624362 WIZO95785 1651 aa12.83□□□□□ -0.35
CCL2-204ENST00000624362 SMARCA2P51531 1590 aa12.82□□□□□ -0.36
CCL2-204ENST00000624362 SENP3Q9H4L4 574 aaPredicted RBP12.81□□□□□ -0.36
CCL2-204ENST00000624362 PEG3Q9GZU2 1588 aa12.79□□□□□ -0.36
CCL2-204ENST00000624362 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
CCL2-204ENST00000624362 TOP2AP11388 1531 aaKnown RBP12.75□□□□□ -0.37
CCL2-204ENST00000624362 BAZ1BQ9UIG0 1483 aaKnown RBP12.75□□□□□ -0.37
CCL2-204ENST00000624362 NCAPD3P42695 1498 aa12.72□□□□□ -0.37
CCL2-204ENST00000624362 CC2D2AQ9P2K1 1620 aa12.69□□□□□ -0.38
CCL2-204ENST00000624362 HMGXB3Q12766 1538 aa12.68□□□□□ -0.38
CCL2-204ENST00000624362 CCDC88BA6NC98 1476 aa12.6□□□□□ -0.39
CCL2-204ENST00000624362 POTEDQ86YR6 584 aa12.56□□□□□ -0.4
CCL2-204ENST00000624362 DNAJC5BQ9UF47 199 aa12.43□□□□□ -0.42
CCL2-204ENST00000624362 CADPSQ9ULU8 1353 aa12.41□□□□□ -0.42
CCL2-204ENST00000624362 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
CCL2-204ENST00000624362 CFTRP13569 1480 aa12.39□□□□□ -0.43
CCL2-204ENST00000624362 LAMC3Q9Y6N6 1575 aa12.32□□□□□ -0.44
CCL2-204ENST00000624362 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
CCL2-204ENST00000624362 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
CCL2-204ENST00000624362 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
CCL2-204ENST00000624362 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
CCL2-204ENST00000624362 FANCD2Q9BXW9 1451 aa12.25□□□□□ -0.45
CCL2-204ENST00000624362 NESP48681 1621 aa12.24□□□□□ -0.45
CCL2-204ENST00000624362 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.46
CCL2-204ENST00000624362 PLPPR3Q6T4P5 718 aa12.16□□□□□ -0.46
CCL2-204ENST00000624362 TOP2BQ02880 1626 aa12.15□□□□□ -0.46
CCL2-204ENST00000624362 SYNJ1O43426 1573 aa12.14□□□□□ -0.47
CCL2-204ENST00000624362 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
CCL2-204ENST00000624362 BIVM-ERCC5R4GMW8 1640 aa12.13□□□□□ -0.47
CCL2-204ENST00000624362 CUX1P39880 1505 aa12.11□□□□□ -0.47
CCL2-204ENST00000624362 EEA1Q15075 1411 aa12.11□□□□□ -0.47
CCL2-204ENST00000624362 DNMBPQ6XZF7 1577 aa12.1□□□□□ -0.47
CCL2-204ENST00000624362 FAM9AQ8IZU1 332 aaPredicted RBP12.1□□□□□ -0.47
CCL2-204ENST00000624362 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
CCL2-204ENST00000624362 TOPBP1Q92547 1522 aa12.08□□□□□ -0.48
CCL2-204ENST00000624362 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
CCL2-204ENST00000624362 FOXD1Q16676 465 aa12.06□□□□□ -0.48
CCL2-204ENST00000624362 FGD5Q6ZNL6 1462 aa12.05□□□□□ -0.48
CCL2-204ENST00000624362 URB2Q14146 1524 aaKnown RBP12.04□□□□□ -0.48
CCL2-204ENST00000624362 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
CCL2-204ENST00000624362 SOGA1O94964 1423 aa12.03□□□□□ -0.48
CCL2-204ENST00000624362 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
CCL2-204ENST00000624362 POLA1P09884 1462 aaPredicted RBP12□□□□□ -0.49
CCL2-204ENST00000624362 WDR62O43379 1518 aa11.98□□□□□ -0.49
CCL2-204ENST00000624362 CUX2O14529 1486 aa11.97□□□□□ -0.49
CCL2-204ENST00000624362 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.5
CCL2-204ENST00000624362 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
CCL2-204ENST00000624362 RUSC2Q8N2Y8 1516 aa11.95□□□□□ -0.5
CCL2-204ENST00000624362 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
CCL2-204ENST00000624362 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
CCL2-204ENST00000624362 IFT140Q96RY7 1462 aa11.93□□□□□ -0.5
CCL2-204ENST00000624362 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
CCL2-204ENST00000624362 UBTFP17480 764 aaKnown RBP11.9□□□□□ -0.5
CCL2-204ENST00000624362 GOLGA3Q08378 1498 aa11.89□□□□□ -0.51
CCL2-204ENST00000624362 TDRD9Q8NDG6 1382 aaKnown RBP11.88□□□□□ -0.51
CCL2-204ENST00000624362 IGF1RP08069 1367 aa11.87□□□□□ -0.51
CCL2-204ENST00000624362 GAPVD1Q14C86 1478 aa11.87□□□□□ -0.51
CCL2-204ENST00000624362 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
CCL2-204ENST00000624362 WDR97A6NE52 1622 aa11.86□□□□□ -0.51
CCL2-204ENST00000624362 KIF21BO75037 1637 aa11.86□□□□□ -0.51
CCL2-204ENST00000624362 CARMIL1Q5VZK9 1371 aa11.85□□□□□ -0.51
CCL2-204ENST00000624362 PRXQ9BXM0 1461 aa11.83□□□□□ -0.52
CCL2-204ENST00000624362 TNIKQ9UKE5 1360 aa11.83□□□□□ -0.52
CCL2-204ENST00000624362 ERICH3Q5RHP9 1530 aa11.83□□□□□ -0.52
CCL2-204ENST00000624362 RAPGEF2Q9Y4G8 1499 aa11.82□□□□□ -0.52
CCL2-204ENST00000624362 ABCA5Q8WWZ7 1642 aa11.82□□□□□ -0.52
CCL2-204ENST00000624362 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.52
CCL2-204ENST00000624362 GRIN2BQ13224 1484 aa11.81□□□□□ -0.52
CCL2-204ENST00000624362 CUL7Q14999 1698 aa11.81□□□□□ -0.52
CCL2-204ENST00000624362 ZNF608Q9ULD9 1512 aaPredicted RBP11.77□□□□□ -0.52
CCL2-204ENST00000624362 FHAD1B1AJZ9 1412 aa11.76□□□□□ -0.53
CCL2-204ENST00000624362 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
CCL2-204ENST00000624362 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
CCL2-204ENST00000624362 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
CCL2-204ENST00000624362 MAGI1Q96QZ7 1491 aaPredicted RBP11.72□□□□□ -0.53
CCL2-204ENST00000624362 CEP162Q5TB80 1403 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms