RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

Gene LINC01006, Length 651 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-208ENST00000624071 NISCHQ9Y2I1 1504 aa46.2■■■■■ 4.99
LINC01006-208ENST00000624071 CCDC180Q9P1Z9 1646 aa40.96■■■■■ 4.15
LINC01006-208ENST00000624071 ABCC9O60706 1549 aa40.4■■■■■ 4.06
LINC01006-208ENST00000624071 DCAF8L2P0C7V8 631 aa38.87■■■■□ 3.81
LINC01006-208ENST00000624071 RB1CC1Q8TDY2 1594 aa38.68■■■■□ 3.78
LINC01006-208ENST00000624071 NACADO15069 1562 aa38.61■■■■□ 3.77
LINC01006-208ENST00000624071 ZCCHC6Q5VYS8 1495 aaKnown RBP38.46■■■■□ 3.75
LINC01006-208ENST00000624071 MYO15BQ96JP2 1530 aa38.29■■■■□ 3.72
LINC01006-208ENST00000624071 DCAF1Q9Y4B6 1507 aa38.12■■■■□ 3.69
LINC01006-208ENST00000624071 PABPN1Q86U42 306 aaKnown RBP eCLIP37.82■■■■□ 3.64
LINC01006-208ENST00000624071 UNC13AQ9UPW8 1703 aa37.7■■■■□ 3.63
LINC01006-208ENST00000624071 SCRIBQ14160 1630 aa37.54■■■■□ 3.6
LINC01006-208ENST00000624071 BICRAQ9NZM4 1560 aa37.53■■■■□ 3.6
LINC01006-208ENST00000624071 DNAJC5BQ9UF47 199 aa37.2■■■■□ 3.55
LINC01006-208ENST00000624071 SHROOM4Q9ULL8 1493 aa37.02■■■■□ 3.52
LINC01006-208ENST00000624071 EIF4G1Q04637 1599 aaKnown RBP36.55■■■■□ 3.44
LINC01006-208ENST00000624071 CC2D2AQ9P2K1 1620 aa36.43■■■■□ 3.42
LINC01006-208ENST00000624071 CECR2Q9BXF3 1484 aa36.26■■■■□ 3.4
LINC01006-208ENST00000624071 SMARCA4P51532 1647 aa35.83■■■■□ 3.33
LINC01006-208ENST00000624071 BAZ1AQ9NRL2 1556 aaPredicted RBP35.78■■■■□ 3.32
LINC01006-208ENST00000624071 ATAD2BQ9ULI0 1458 aa35.72■■■■□ 3.31
LINC01006-208ENST00000624071 NCAPD3P42695 1498 aa35.67■■■■□ 3.3
LINC01006-208ENST00000624071 MROH2BQ7Z745 1585 aa35.65■■■■□ 3.3
LINC01006-208ENST00000624071 SMARCA2P51531 1590 aa35.59■■■■□ 3.29
LINC01006-208ENST00000624071 PEG3Q9GZU2 1588 aa35.42■■■■□ 3.26
LINC01006-208ENST00000624071 HMGXB3Q12766 1538 aa35.42■■■■□ 3.26
LINC01006-208ENST00000624071 BAZ1BQ9UIG0 1483 aaKnown RBP35.41■■■■□ 3.26
LINC01006-208ENST00000624071 RSF1Q96T23 1441 aaPredicted RBP35.23■■■■□ 3.23
LINC01006-208ENST00000624071 WIZO95785 1651 aa35.23■■■■□ 3.23
LINC01006-208ENST00000624071 NESP48681 1621 aa34.92■■■■□ 3.18
LINC01006-208ENST00000624071 TOP2AP11388 1531 aaKnown RBP34.83■■■■□ 3.17
LINC01006-208ENST00000624071 ERCC6Q03468 1493 aa34.79■■■■□ 3.16
LINC01006-208ENST00000624071 CADPSQ9ULU8 1353 aa34.68■■■■□ 3.14
LINC01006-208ENST00000624071 LAMC3Q9Y6N6 1575 aa34.68■■■■□ 3.14
LINC01006-208ENST00000624071 PDS5BQ9NTI5 1447 aa34.54■■■■□ 3.12
LINC01006-208ENST00000624071 CCDC88BA6NC98 1476 aa34.49■■■■□ 3.11
LINC01006-208ENST00000624071 SUPT5HO00267 1087 aaKnown RBP34.45■■■■□ 3.11
LINC01006-208ENST00000624071 CFTRP13569 1480 aa34.42■■■■□ 3.1
LINC01006-208ENST00000624071 KIF21AQ7Z4S6 1674 aa34.37■■■■□ 3.09
LINC01006-208ENST00000624071 CUX2O14529 1486 aa34.35■■■■□ 3.09
LINC01006-208ENST00000624071 THOC2Q8NI27 1593 aaKnown RBP34.28■■■■□ 3.08
LINC01006-208ENST00000624071 FANCD2Q9BXW9 1451 aa34.28■■■■□ 3.08
LINC01006-208ENST00000624071 CEP164Q9UPV0 1460 aa34.22■■■■□ 3.07
LINC01006-208ENST00000624071 MRC2Q9UBG0 1479 aa34.18■■■■□ 3.06
LINC01006-208ENST00000624071 WDR62O43379 1518 aa34.02■■■■□ 3.04
LINC01006-208ENST00000624071 PRDM2Q13029 1718 aa33.95■■■■□ 3.03
LINC01006-208ENST00000624071 URB2Q14146 1524 aaKnown RBP33.94■■■■□ 3.02
LINC01006-208ENST00000624071 TOPBP1Q92547 1522 aa33.71■■■□□ 2.99
LINC01006-208ENST00000624071 ABCC8Q09428 1581 aa33.64■■■□□ 2.98
LINC01006-208ENST00000624071 DNMBPQ6XZF7 1577 aa33.61■■■□□ 2.97
LINC01006-208ENST00000624071 IFT140Q96RY7 1462 aa33.5■■■□□ 2.95
LINC01006-208ENST00000624071 DNAJC5Q9H3Z4 198 aa33.49■■■□□ 2.95
LINC01006-208ENST00000624071 CUX1P39880 1505 aa33.43■■■□□ 2.94
LINC01006-208ENST00000624071 POLA1P09884 1462 aaPredicted RBP33.43■■■□□ 2.94
LINC01006-208ENST00000624071 ZNF608Q9ULD9 1512 aaPredicted RBP33.42■■■□□ 2.94
LINC01006-208ENST00000624071 FGD5Q6ZNL6 1462 aa33.35■■■□□ 2.93
LINC01006-208ENST00000624071 RAD54L2Q9Y4B4 1467 aa33.34■■■□□ 2.93
LINC01006-208ENST00000624071 SOGA1O94964 1423 aa33.33■■■□□ 2.93
LINC01006-208ENST00000624071 TARBP1Q13395 1621 aaKnown RBP33.28■■■□□ 2.92
LINC01006-208ENST00000624071 AQRO60306 1485 aaKnown RBP eCLIP33.24■■■□□ 2.91
LINC01006-208ENST00000624071 WRNQ14191 1432 aaPredicted RBP eCLIP33.21■■■□□ 2.91
LINC01006-208ENST00000624071 TDRD9Q8NDG6 1382 aaKnown RBP33.2■■■□□ 2.9
LINC01006-208ENST00000624071 EIF4G3O43432 1585 aaKnown RBP33.18■■■□□ 2.9
LINC01006-208ENST00000624071 SYNJ1O43426 1573 aa33.11■■■□□ 2.89
LINC01006-208ENST00000624071 TOP2BQ02880 1626 aa33.06■■■□□ 2.88
LINC01006-208ENST00000624071 OSCARQ8IYS5 282 aa33.03■■■□□ 2.88
LINC01006-208ENST00000624071 BIVM-ERCC5R4GMW8 1640 aa33.02■■■□□ 2.88
LINC01006-208ENST00000624071 ABCA10Q8WWZ4 1543 aa32.97■■■□□ 2.87
LINC01006-208ENST00000624071 FBLN2P98095 1184 aa32.94■■■□□ 2.86
LINC01006-208ENST00000624071 WDR97A6NE52 1622 aa32.93■■■□□ 2.86
LINC01006-208ENST00000624071 GRIN2BQ13224 1484 aa32.9■■■□□ 2.86
LINC01006-208ENST00000624071 GAPVD1Q14C86 1478 aa32.9■■■□□ 2.86
LINC01006-208ENST00000624071 SNAPC4Q5SXM2 1469 aa32.89■■■□□ 2.86
LINC01006-208ENST00000624071 ABCA5Q8WWZ7 1642 aa32.8■■■□□ 2.84
LINC01006-208ENST00000624071 CHMP7Q8WUX9 453 aaPredicted RBP32.78■■■□□ 2.84
LINC01006-208ENST00000624071 MAGI1Q96QZ7 1491 aaPredicted RBP32.78■■■□□ 2.84
LINC01006-208ENST00000624071 CHD1O14646 1710 aa32.74■■■□□ 2.83
LINC01006-208ENST00000624071 PBRM1Q86U86 1689 aa32.72■■■□□ 2.83
LINC01006-208ENST00000624071 SYNJ2O15056 1496 aa32.68■■■□□ 2.82
LINC01006-208ENST00000624071 ERICH3Q5RHP9 1530 aa32.55■■■□□ 2.8
LINC01006-208ENST00000624071 ADAMTS12P58397 1594 aa32.53■■■□□ 2.8
LINC01006-208ENST00000624071 FHAD1B1AJZ9 1412 aa32.51■■■□□ 2.8
LINC01006-208ENST00000624071 KIF27Q86VH2 1401 aa32.51■■■□□ 2.8
LINC01006-208ENST00000624071 TRIM41Q8WV44 630 aa32.49■■■□□ 2.79
LINC01006-208ENST00000624071 GRIN2AQ12879 1464 aa32.47■■■□□ 2.79
LINC01006-208ENST00000624071 ARHGEF11O15085 1522 aa32.44■■■□□ 2.78
LINC01006-208ENST00000624071 IGF1RP08069 1367 aa32.44■■■□□ 2.78
LINC01006-208ENST00000624071 CLASP1Q7Z460 1538 aa32.42■■■□□ 2.78
LINC01006-208ENST00000624071 RIMBP3CA6NJZ7 1639 aa32.41■■■□□ 2.78
LINC01006-208ENST00000624071 RIMBP3BA6NNM3 1639 aa32.41■■■□□ 2.78
LINC01006-208ENST00000624071 RIMBP3Q9UFD9 1639 aa32.41■■■□□ 2.78
LINC01006-208ENST00000624071 NUP160Q12769 1436 aa32.32■■■□□ 2.76
LINC01006-208ENST00000624071 CEP170Q5SW79 1584 aa32.31■■■□□ 2.76
LINC01006-208ENST00000624071 RUSC2Q8N2Y8 1516 aa32.28■■■□□ 2.76
LINC01006-208ENST00000624071 CYB5RLQ6IPT4 315 aa32.27■■■□□ 2.76
LINC01006-208ENST00000624071 CARMIL1Q5VZK9 1371 aa32.23■■■□□ 2.75
LINC01006-208ENST00000624071 ARAP1Q96P48 1450 aa32.2■■■□□ 2.75
LINC01006-208ENST00000624071 CUL7Q14999 1698 aa32.2■■■□□ 2.74
LINC01006-208ENST00000624071 JPH4Q96JJ6 628 aa32.08■■■□□ 2.73
LINC01006-208ENST00000624071 ERCC6L2Q5T890 1561 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms