RNA–Protein interactions for RNA: ENST00000623236.1

CR392039.3-201, humanhuman

TSL 5 BASIC

Gene CR392039.3, Length 227 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR392039.3-201ENST00000623236 NISCHQ9Y2I1 1504 aa17.37■□□□□ 0.37
CR392039.3-201ENST00000623236 AEBP2Q6ZN18 517 aaPredicted RBP15.18■□□□□ 0.02
CR392039.3-201ENST00000623236 CCDC180Q9P1Z9 1646 aa15.04■□□□□ -0
CR392039.3-201ENST00000623236 CHIC1Q5VXU3 224 aa14.85□□□□□ -0.03
CR392039.3-201ENST00000623236 ZCCHC6Q5VYS8 1495 aaKnown RBP14.57□□□□□ -0.08
CR392039.3-201ENST00000623236 DCAF8L2P0C7V8 631 aa14.46□□□□□ -0.09
CR392039.3-201ENST00000623236 ABCC9O60706 1549 aa14.38□□□□□ -0.11
CR392039.3-201ENST00000623236 DCAF1Q9Y4B6 1507 aa14.35□□□□□ -0.11
CR392039.3-201ENST00000623236 MYO15BQ96JP2 1530 aa14.2□□□□□ -0.14
CR392039.3-201ENST00000623236 SHROOM4Q9ULL8 1493 aa14.19□□□□□ -0.14
CR392039.3-201ENST00000623236 NACADO15069 1562 aa14.1□□□□□ -0.15
CR392039.3-201ENST00000623236 RB1CC1Q8TDY2 1594 aa13.96□□□□□ -0.17
CR392039.3-201ENST00000623236 SCRIBQ14160 1630 aa13.88□□□□□ -0.19
CR392039.3-201ENST00000623236 SUPT5HO00267 1087 aaKnown RBP13.69□□□□□ -0.22
CR392039.3-201ENST00000623236 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
CR392039.3-201ENST00000623236 BICRAQ9NZM4 1560 aa13.56□□□□□ -0.24
CR392039.3-201ENST00000623236 UNC13AQ9UPW8 1703 aa13.55□□□□□ -0.24
CR392039.3-201ENST00000623236 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
CR392039.3-201ENST00000623236 RSF1Q96T23 1441 aaPredicted RBP13.51□□□□□ -0.25
CR392039.3-201ENST00000623236 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
CR392039.3-201ENST00000623236 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
CR392039.3-201ENST00000623236 SMARCA4P51532 1647 aa13.3□□□□□ -0.28
CR392039.3-201ENST00000623236 WIZO95785 1651 aa13.25□□□□□ -0.29
CR392039.3-201ENST00000623236 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
CR392039.3-201ENST00000623236 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
CR392039.3-201ENST00000623236 PEG3Q9GZU2 1588 aa13.15□□□□□ -0.3
CR392039.3-201ENST00000623236 TOP2AP11388 1531 aaKnown RBP13.13□□□□□ -0.31
CR392039.3-201ENST00000623236 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
CR392039.3-201ENST00000623236 NCAPD3P42695 1498 aa13.08□□□□□ -0.32
CR392039.3-201ENST00000623236 CCDC88BA6NC98 1476 aa13.06□□□□□ -0.32
CR392039.3-201ENST00000623236 BAZ1BQ9UIG0 1483 aaKnown RBP13.06□□□□□ -0.32
CR392039.3-201ENST00000623236 PHF23Q9BUL5 403 aaPredicted RBP13.06□□□□□ -0.32
CR392039.3-201ENST00000623236 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
CR392039.3-201ENST00000623236 CC2D2AQ9P2K1 1620 aa12.95□□□□□ -0.34
CR392039.3-201ENST00000623236 SENP3Q9H4L4 574 aaPredicted RBP12.88□□□□□ -0.35
CR392039.3-201ENST00000623236 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
CR392039.3-201ENST00000623236 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
CR392039.3-201ENST00000623236 CADPSQ9ULU8 1353 aa12.76□□□□□ -0.37
CR392039.3-201ENST00000623236 CFTRP13569 1480 aa12.76□□□□□ -0.37
CR392039.3-201ENST00000623236 ABCC8Q09428 1581 aa12.72□□□□□ -0.37
CR392039.3-201ENST00000623236 WRNQ14191 1432 aaPredicted RBP eCLIP12.7□□□□□ -0.38
CR392039.3-201ENST00000623236 FAM9AQ8IZU1 332 aaPredicted RBP12.64□□□□□ -0.39
CR392039.3-201ENST00000623236 LOC105371045A0A1W2PR82 267 aa12.62□□□□□ -0.39
CR392039.3-201ENST00000623236 NESP48681 1621 aa12.61□□□□□ -0.39
CR392039.3-201ENST00000623236 SYNJ1O43426 1573 aa12.58□□□□□ -0.4
CR392039.3-201ENST00000623236 FANCD2Q9BXW9 1451 aa12.57□□□□□ -0.4
CR392039.3-201ENST00000623236 SOGA1O94964 1423 aa12.55□□□□□ -0.4
CR392039.3-201ENST00000623236 LAMC3Q9Y6N6 1575 aa12.55□□□□□ -0.4
CR392039.3-201ENST00000623236 CUX1P39880 1505 aa12.54□□□□□ -0.4
CR392039.3-201ENST00000623236 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
CR392039.3-201ENST00000623236 TOP2BQ02880 1626 aa12.53□□□□□ -0.4
CR392039.3-201ENST00000623236 CSRNP3Q8WYN3 585 aa12.51□□□□□ -0.41
CR392039.3-201ENST00000623236 EEA1Q15075 1411 aa12.5□□□□□ -0.41
CR392039.3-201ENST00000623236 RUSC2Q8N2Y8 1516 aa12.5□□□□□ -0.41
CR392039.3-201ENST00000623236 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
CR392039.3-201ENST00000623236 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
CR392039.3-201ENST00000623236 CEP164Q9UPV0 1460 aa12.47□□□□□ -0.41
CR392039.3-201ENST00000623236 EHMT2Q96KQ7 1210 aa12.45□□□□□ -0.42
CR392039.3-201ENST00000623236 TOPBP1Q92547 1522 aa12.42□□□□□ -0.42
CR392039.3-201ENST00000623236 FGD5Q6ZNL6 1462 aa12.41□□□□□ -0.42
CR392039.3-201ENST00000623236 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
CR392039.3-201ENST00000623236 URB2Q14146 1524 aaKnown RBP12.41□□□□□ -0.42
CR392039.3-201ENST00000623236 KIF27Q86VH2 1401 aa12.39□□□□□ -0.43
CR392039.3-201ENST00000623236 POLA1P09884 1462 aaPredicted RBP12.36□□□□□ -0.43
CR392039.3-201ENST00000623236 CUX2O14529 1486 aa12.35□□□□□ -0.43
CR392039.3-201ENST00000623236 RAD54L2Q9Y4B4 1467 aa12.35□□□□□ -0.43
CR392039.3-201ENST00000623236 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
CR392039.3-201ENST00000623236 IGF1RP08069 1367 aa12.33□□□□□ -0.44
CR392039.3-201ENST00000623236 UBTFP17480 764 aaKnown RBP12.33□□□□□ -0.44
CR392039.3-201ENST00000623236 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
CR392039.3-201ENST00000623236 ERCC6Q03468 1493 aa12.32□□□□□ -0.44
CR392039.3-201ENST00000623236 TNIKQ9UKE5 1360 aa12.31□□□□□ -0.44
CR392039.3-201ENST00000623236 GOLGA3Q08378 1498 aa12.31□□□□□ -0.44
CR392039.3-201ENST00000623236 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
CR392039.3-201ENST00000623236 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
CR392039.3-201ENST00000623236 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
CR392039.3-201ENST00000623236 RAPGEF2Q9Y4G8 1499 aa12.27□□□□□ -0.45
CR392039.3-201ENST00000623236 KIF21BO75037 1637 aa12.26□□□□□ -0.45
CR392039.3-201ENST00000623236 CARMIL1Q5VZK9 1371 aa12.25□□□□□ -0.45
CR392039.3-201ENST00000623236 WDR62O43379 1518 aa12.25□□□□□ -0.45
CR392039.3-201ENST00000623236 ERICH3Q5RHP9 1530 aa12.21□□□□□ -0.46
CR392039.3-201ENST00000623236 IFT140Q96RY7 1462 aa12.21□□□□□ -0.46
CR392039.3-201ENST00000623236 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
CR392039.3-201ENST00000623236 GAPVD1Q14C86 1478 aa12.2□□□□□ -0.46
CR392039.3-201ENST00000623236 TARBP1Q13395 1621 aaKnown RBP12.19□□□□□ -0.46
CR392039.3-201ENST00000623236 THOC2Q8NI27 1593 aaKnown RBP12.18□□□□□ -0.46
CR392039.3-201ENST00000623236 AQRO60306 1485 aaKnown RBP eCLIP12.17□□□□□ -0.46
CR392039.3-201ENST00000623236 WDR97A6NE52 1622 aa12.15□□□□□ -0.46
CR392039.3-201ENST00000623236 ZNF608Q9ULD9 1512 aaPredicted RBP12.14□□□□□ -0.47
CR392039.3-201ENST00000623236 ABCA5Q8WWZ7 1642 aa12.14□□□□□ -0.47
CR392039.3-201ENST00000623236 CLIP1P30622 1438 aa12.13□□□□□ -0.47
CR392039.3-201ENST00000623236 RANGAP1P46060 587 aaPredicted RBP12.13□□□□□ -0.47
CR392039.3-201ENST00000623236 GRIN2BQ13224 1484 aa12.11□□□□□ -0.47
CR392039.3-201ENST00000623236 FHAD1B1AJZ9 1412 aa12.09□□□□□ -0.47
CR392039.3-201ENST00000623236 CUL7Q14999 1698 aa12.07□□□□□ -0.48
CR392039.3-201ENST00000623236 PLPPR3Q6T4P5 718 aa12.04□□□□□ -0.48
CR392039.3-201ENST00000623236 VPS8Q8N3P4 1428 aa12.02□□□□□ -0.49
CR392039.3-201ENST00000623236 SNAPC4Q5SXM2 1469 aa12.02□□□□□ -0.49
CR392039.3-201ENST00000623236 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
CR392039.3-201ENST00000623236 ARHGAP35Q9NRY4 1499 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms