RNA–Protein interactions for RNA: ENST00000622449.2

MADCAM1-209, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

TSL 2

Gene MADCAM1, Length 533 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-209ENST00000622449 NISCHQ9Y2I1 1504 aa54.32■■■■■ 6.29
MADCAM1-209ENST00000622449 CCDC180Q9P1Z9 1646 aa48.19■■■■■ 5.31
MADCAM1-209ENST00000622449 ABCC9O60706 1549 aa46.92■■■■■ 5.1
MADCAM1-209ENST00000622449 ZCCHC6Q5VYS8 1495 aaKnown RBP45.31■■■■■ 4.84
MADCAM1-209ENST00000622449 NACADO15069 1562 aa45.27■■■■■ 4.84
MADCAM1-209ENST00000622449 DCAF8L2P0C7V8 631 aa45.23■■■■■ 4.83
MADCAM1-209ENST00000622449 RB1CC1Q8TDY2 1594 aa45.21■■■■■ 4.83
MADCAM1-209ENST00000622449 MYO15BQ96JP2 1530 aa45.17■■■■■ 4.82
MADCAM1-209ENST00000622449 DCAF1Q9Y4B6 1507 aa45.08■■■■■ 4.81
MADCAM1-209ENST00000622449 DNAJC5BQ9UF47 199 aa44.09■■■■■ 4.65
MADCAM1-209ENST00000622449 UNC13AQ9UPW8 1703 aa43.97■■■■■ 4.63
MADCAM1-209ENST00000622449 SCRIBQ14160 1630 aa43.85■■■■■ 4.61
MADCAM1-209ENST00000622449 BICRAQ9NZM4 1560 aa43.64■■■■■ 4.58
MADCAM1-209ENST00000622449 PABPN1Q86U42 306 aaKnown RBP eCLIP43.64■■■■■ 4.58
MADCAM1-209ENST00000622449 SHROOM4Q9ULL8 1493 aa43.53■■■■■ 4.56
MADCAM1-209ENST00000622449 EIF4G1Q04637 1599 aaKnown RBP42.54■■■■■ 4.4
MADCAM1-209ENST00000622449 CC2D2AQ9P2K1 1620 aa42.42■■■■■ 4.38
MADCAM1-209ENST00000622449 CECR2Q9BXF3 1484 aa42.24■■■■■ 4.35
MADCAM1-209ENST00000622449 BAZ1AQ9NRL2 1556 aaPredicted RBP42.14■■■■■ 4.34
MADCAM1-209ENST00000622449 SMARCA4P51532 1647 aa42.04■■■■■ 4.32
MADCAM1-209ENST00000622449 SMARCA2P51531 1590 aa41.82■■■■■ 4.29
MADCAM1-209ENST00000622449 MROH2BQ7Z745 1585 aa41.77■■■■■ 4.28
MADCAM1-209ENST00000622449 ATAD2BQ9ULI0 1458 aa41.74■■■■■ 4.27
MADCAM1-209ENST00000622449 NCAPD3P42695 1498 aa41.72■■■■■ 4.27
MADCAM1-209ENST00000622449 PEG3Q9GZU2 1588 aa41.69■■■■■ 4.26
MADCAM1-209ENST00000622449 HMGXB3Q12766 1538 aa41.56■■■■■ 4.24
MADCAM1-209ENST00000622449 RSF1Q96T23 1441 aaPredicted RBP41.49■■■■■ 4.23
MADCAM1-209ENST00000622449 BAZ1BQ9UIG0 1483 aaKnown RBP41.47■■■■■ 4.23
MADCAM1-209ENST00000622449 WIZO95785 1651 aa41.33■■■■■ 4.21
MADCAM1-209ENST00000622449 TOP2AP11388 1531 aaKnown RBP41.03■■■■■ 4.16
MADCAM1-209ENST00000622449 SUPT5HO00267 1087 aaKnown RBP40.71■■■■■ 4.11
MADCAM1-209ENST00000622449 LAMC3Q9Y6N6 1575 aa40.59■■■■■ 4.09
MADCAM1-209ENST00000622449 CADPSQ9ULU8 1353 aa40.53■■■■■ 4.08
MADCAM1-209ENST00000622449 CCDC88BA6NC98 1476 aa40.5■■■■■ 4.07
MADCAM1-209ENST00000622449 DNAJC5Q9H3Z4 198 aa40.49■■■■■ 4.07
MADCAM1-209ENST00000622449 ERCC6Q03468 1493 aa40.46■■■■■ 4.07
MADCAM1-209ENST00000622449 CUX2O14529 1486 aa40.42■■■■■ 4.06
MADCAM1-209ENST00000622449 NESP48681 1621 aa40.42■■■■■ 4.06
MADCAM1-209ENST00000622449 PDS5BQ9NTI5 1447 aa40.36■■■■■ 4.05
MADCAM1-209ENST00000622449 CFTRP13569 1480 aa40.35■■■■■ 4.05
MADCAM1-209ENST00000622449 PRDM2Q13029 1718 aa40.05■■■■■ 4
MADCAM1-209ENST00000622449 FANCD2Q9BXW9 1451 aa40.02■■■■■ 4
MADCAM1-209ENST00000622449 KIF21AQ7Z4S6 1674 aa39.99■■■■□ 3.99
MADCAM1-209ENST00000622449 CEP164Q9UPV0 1460 aa39.98■■■■□ 3.99
MADCAM1-209ENST00000622449 THOC2Q8NI27 1593 aaKnown RBP39.94■■■■□ 3.98
MADCAM1-209ENST00000622449 MRC2Q9UBG0 1479 aa39.82■■■■□ 3.97
MADCAM1-209ENST00000622449 WDR62O43379 1518 aa39.65■■■■□ 3.94
MADCAM1-209ENST00000622449 ABCC8Q09428 1581 aa39.63■■■■□ 3.93
MADCAM1-209ENST00000622449 URB2Q14146 1524 aaKnown RBP39.52■■■■□ 3.92
MADCAM1-209ENST00000622449 DNMBPQ6XZF7 1577 aa39.42■■■■□ 3.9
MADCAM1-209ENST00000622449 TOPBP1Q92547 1522 aa39.4■■■■□ 3.9
MADCAM1-209ENST00000622449 CUX1P39880 1505 aa39.19■■■■□ 3.86
MADCAM1-209ENST00000622449 WRNQ14191 1432 aaPredicted RBP eCLIP39.17■■■■□ 3.86
MADCAM1-209ENST00000622449 IFT140Q96RY7 1462 aa39.16■■■■□ 3.86
MADCAM1-209ENST00000622449 POLA1P09884 1462 aaPredicted RBP39.08■■■■□ 3.85
MADCAM1-209ENST00000622449 FGD5Q6ZNL6 1462 aa39.03■■■■□ 3.84
MADCAM1-209ENST00000622449 TOP2BQ02880 1626 aa39.03■■■■□ 3.84
MADCAM1-209ENST00000622449 BIVM-ERCC5R4GMW8 1640 aa39■■■■□ 3.83
MADCAM1-209ENST00000622449 SOGA1O94964 1423 aa38.99■■■■□ 3.83
MADCAM1-209ENST00000622449 SYNJ1O43426 1573 aa38.92■■■■□ 3.82
MADCAM1-209ENST00000622449 TARBP1Q13395 1621 aaKnown RBP38.91■■■■□ 3.82
MADCAM1-209ENST00000622449 RAD54L2Q9Y4B4 1467 aa38.84■■■■□ 3.81
MADCAM1-209ENST00000622449 WDR97A6NE52 1622 aa38.83■■■■□ 3.81
MADCAM1-209ENST00000622449 ZNF608Q9ULD9 1512 aaPredicted RBP38.76■■■■□ 3.8
MADCAM1-209ENST00000622449 ABCA10Q8WWZ4 1543 aa38.74■■■■□ 3.79
MADCAM1-209ENST00000622449 TRIM41Q8WV44 630 aa38.7■■■■□ 3.79
MADCAM1-209ENST00000622449 EIF4G3O43432 1585 aaKnown RBP38.68■■■■□ 3.78
MADCAM1-209ENST00000622449 TDRD9Q8NDG6 1382 aaKnown RBP38.65■■■■□ 3.78
MADCAM1-209ENST00000622449 AQRO60306 1485 aaKnown RBP eCLIP38.63■■■■□ 3.77
MADCAM1-209ENST00000622449 GAPVD1Q14C86 1478 aa38.54■■■■□ 3.76
MADCAM1-209ENST00000622449 OSCARQ8IYS5 282 aa38.53■■■■□ 3.76
MADCAM1-209ENST00000622449 GRIN2BQ13224 1484 aa38.53■■■■□ 3.76
MADCAM1-209ENST00000622449 ABCA5Q8WWZ7 1642 aa38.49■■■■□ 3.75
MADCAM1-209ENST00000622449 MAGI1Q96QZ7 1491 aaPredicted RBP38.41■■■■□ 3.74
MADCAM1-209ENST00000622449 KIF27Q86VH2 1401 aa38.4■■■■□ 3.74
MADCAM1-209ENST00000622449 PBRM1Q86U86 1689 aa38.36■■■■□ 3.73
MADCAM1-209ENST00000622449 ERICH3Q5RHP9 1530 aa38.33■■■■□ 3.73
MADCAM1-209ENST00000622449 SNAPC4Q5SXM2 1469 aa38.32■■■■□ 3.72
MADCAM1-209ENST00000622449 CHMP7Q8WUX9 453 aaPredicted RBP38.22■■■■□ 3.71
MADCAM1-209ENST00000622449 SYNJ2O15056 1496 aa38.22■■■■□ 3.71
MADCAM1-209ENST00000622449 CHIC1Q5VXU3 224 aa38.21■■■■□ 3.71
MADCAM1-209ENST00000622449 FBLN2P98095 1184 aa38.19■■■■□ 3.7
MADCAM1-209ENST00000622449 RIMBP3CA6NJZ7 1639 aa38.17■■■■□ 3.7
MADCAM1-209ENST00000622449 RIMBP3BA6NNM3 1639 aa38.17■■■■□ 3.7
MADCAM1-209ENST00000622449 RIMBP3Q9UFD9 1639 aa38.17■■■■□ 3.7
MADCAM1-209ENST00000622449 FHAD1B1AJZ9 1412 aa38.15■■■■□ 3.7
MADCAM1-209ENST00000622449 IGF1RP08069 1367 aa38.1■■■■□ 3.69
MADCAM1-209ENST00000622449 ADAMTS12P58397 1594 aa38.1■■■■□ 3.69
MADCAM1-209ENST00000622449 CHD1O14646 1710 aa38.09■■■■□ 3.69
MADCAM1-209ENST00000622449 CUL7Q14999 1698 aa38.04■■■■□ 3.68
MADCAM1-209ENST00000622449 ARHGEF11O15085 1522 aa37.99■■■■□ 3.67
MADCAM1-209ENST00000622449 EEA1Q15075 1411 aa37.99■■■■□ 3.67
MADCAM1-209ENST00000622449 GRIN2AQ12879 1464 aa37.97■■■■□ 3.67
MADCAM1-209ENST00000622449 CARMIL1Q5VZK9 1371 aa37.93■■■■□ 3.66
MADCAM1-209ENST00000622449 RUSC2Q8N2Y8 1516 aa37.89■■■■□ 3.66
MADCAM1-209ENST00000622449 NUP160Q12769 1436 aa37.79■■■■□ 3.64
MADCAM1-209ENST00000622449 CSRNP3Q8WYN3 585 aa37.79■■■■□ 3.64
MADCAM1-209ENST00000622449 RAPGEF2Q9Y4G8 1499 aa37.76■■■■□ 3.63
MADCAM1-209ENST00000622449 CLASP1Q7Z460 1538 aa37.73■■■■□ 3.63
MADCAM1-209ENST00000622449 CEP170Q5SW79 1584 aa37.68■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms