RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.77
POLR2J3-221ENST00000621093 CCDC180Q9P1Z9 1646 aa23.13■■□□□ 1.29
POLR2J3-221ENST00000621093 ABCC9O60706 1549 aa22.37■■□□□ 1.17
POLR2J3-221ENST00000621093 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.08
POLR2J3-221ENST00000621093 DCAF8L2P0C7V8 631 aa21.73■■□□□ 1.07
POLR2J3-221ENST00000621093 NACADO15069 1562 aa21.63■■□□□ 1.05
POLR2J3-221ENST00000621093 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
POLR2J3-221ENST00000621093 DCAF1Q9Y4B6 1507 aa21.58■■□□□ 1.04
POLR2J3-221ENST00000621093 MYO15BQ96JP2 1530 aa21.54■■□□□ 1.04
POLR2J3-221ENST00000621093 UNC13AQ9UPW8 1703 aa21.29■■□□□ 1
POLR2J3-221ENST00000621093 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
POLR2J3-221ENST00000621093 BICRAQ9NZM4 1560 aa21.01■□□□□ 0.95
POLR2J3-221ENST00000621093 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
POLR2J3-221ENST00000621093 SHROOM4Q9ULL8 1493 aa20.89■□□□□ 0.94
POLR2J3-221ENST00000621093 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
POLR2J3-221ENST00000621093 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
POLR2J3-221ENST00000621093 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
POLR2J3-221ENST00000621093 SMARCA4P51532 1647 aa20.26■□□□□ 0.83
POLR2J3-221ENST00000621093 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
POLR2J3-221ENST00000621093 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
POLR2J3-221ENST00000621093 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
POLR2J3-221ENST00000621093 WIZO95785 1651 aa20.04■□□□□ 0.8
POLR2J3-221ENST00000621093 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.8
POLR2J3-221ENST00000621093 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.79
POLR2J3-221ENST00000621093 SMARCA2P51531 1590 aa20■□□□□ 0.79
POLR2J3-221ENST00000621093 PEG3Q9GZU2 1588 aa20■□□□□ 0.79
POLR2J3-221ENST00000621093 NCAPD3P42695 1498 aa19.93■□□□□ 0.78
POLR2J3-221ENST00000621093 HMGXB3Q12766 1538 aa19.88■□□□□ 0.77
POLR2J3-221ENST00000621093 BAZ1BQ9UIG0 1483 aaKnown RBP19.87■□□□□ 0.77
POLR2J3-221ENST00000621093 TOP2AP11388 1531 aaKnown RBP19.76■□□□□ 0.75
POLR2J3-221ENST00000621093 SUPT5HO00267 1087 aaKnown RBP19.76■□□□□ 0.75
POLR2J3-221ENST00000621093 CCDC88BA6NC98 1476 aa19.54■□□□□ 0.72
POLR2J3-221ENST00000621093 NESP48681 1621 aa19.47■□□□□ 0.71
POLR2J3-221ENST00000621093 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
POLR2J3-221ENST00000621093 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
POLR2J3-221ENST00000621093 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
POLR2J3-221ENST00000621093 CFTRP13569 1480 aa19.33■□□□□ 0.68
POLR2J3-221ENST00000621093 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
POLR2J3-221ENST00000621093 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
POLR2J3-221ENST00000621093 PDS5BQ9NTI5 1447 aa19.2■□□□□ 0.66
POLR2J3-221ENST00000621093 FANCD2Q9BXW9 1451 aa19.18■□□□□ 0.66
POLR2J3-221ENST00000621093 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
POLR2J3-221ENST00000621093 THOC2Q8NI27 1593 aaKnown RBP19.1■□□□□ 0.65
POLR2J3-221ENST00000621093 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
POLR2J3-221ENST00000621093 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
POLR2J3-221ENST00000621093 WDR62O43379 1518 aa18.98■□□□□ 0.63
POLR2J3-221ENST00000621093 ABCC8Q09428 1581 aa18.98■□□□□ 0.63
POLR2J3-221ENST00000621093 TOPBP1Q92547 1522 aa18.93■□□□□ 0.62
POLR2J3-221ENST00000621093 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
POLR2J3-221ENST00000621093 CUX1P39880 1505 aa18.92■□□□□ 0.62
POLR2J3-221ENST00000621093 CUX2O14529 1486 aa18.87■□□□□ 0.61
POLR2J3-221ENST00000621093 SYNJ1O43426 1573 aa18.87■□□□□ 0.61
POLR2J3-221ENST00000621093 WRNQ14191 1432 aaPredicted RBP eCLIP18.85■□□□□ 0.611e-6■■■■■ 58.5
POLR2J3-221ENST00000621093 BIVM-ERCC5R4GMW8 1640 aa18.85■□□□□ 0.61
POLR2J3-221ENST00000621093 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
POLR2J3-221ENST00000621093 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
POLR2J3-221ENST00000621093 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
POLR2J3-221ENST00000621093 RAD54L2Q9Y4B4 1467 aa18.73■□□□□ 0.59
POLR2J3-221ENST00000621093 TARBP1Q13395 1621 aaKnown RBP18.73■□□□□ 0.59
POLR2J3-221ENST00000621093 SOGA1O94964 1423 aa18.69■□□□□ 0.58
POLR2J3-221ENST00000621093 WDR97A6NE52 1622 aa18.69■□□□□ 0.58
POLR2J3-221ENST00000621093 IFT140Q96RY7 1462 aa18.69■□□□□ 0.58
POLR2J3-221ENST00000621093 ZNF608Q9ULD9 1512 aaPredicted RBP18.65■□□□□ 0.58
POLR2J3-221ENST00000621093 EIF4G3O43432 1585 aaKnown RBP18.6■□□□□ 0.57
POLR2J3-221ENST00000621093 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
POLR2J3-221ENST00000621093 TRIM41Q8WV44 630 aa18.6■□□□□ 0.57
POLR2J3-221ENST00000621093 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
POLR2J3-221ENST00000621093 AQRO60306 1485 aaKnown RBP eCLIP18.57■□□□□ 0.564e-8■■■■□ 22.5
POLR2J3-221ENST00000621093 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
POLR2J3-221ENST00000621093 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
POLR2J3-221ENST00000621093 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
POLR2J3-221ENST00000621093 GAPVD1Q14C86 1478 aa18.48■□□□□ 0.55
POLR2J3-221ENST00000621093 RUSC2Q8N2Y8 1516 aa18.45■□□□□ 0.54
POLR2J3-221ENST00000621093 GRIN2BQ13224 1484 aa18.42■□□□□ 0.54
POLR2J3-221ENST00000621093 KIF27Q86VH2 1401 aa18.41■□□□□ 0.54
POLR2J3-221ENST00000621093 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
POLR2J3-221ENST00000621093 CHD1O14646 1710 aa18.38■□□□□ 0.53
POLR2J3-221ENST00000621093 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
POLR2J3-221ENST00000621093 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
POLR2J3-221ENST00000621093 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
POLR2J3-221ENST00000621093 IGF1RP08069 1367 aa18.31■□□□□ 0.52
POLR2J3-221ENST00000621093 CUL7Q14999 1698 aa18.29■□□□□ 0.52
POLR2J3-221ENST00000621093 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
POLR2J3-221ENST00000621093 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
POLR2J3-221ENST00000621093 FBLN2P98095 1184 aa18.26■□□□□ 0.51
POLR2J3-221ENST00000621093 FHAD1B1AJZ9 1412 aa18.25■□□□□ 0.51
POLR2J3-221ENST00000621093 CHMP7Q8WUX9 453 aaPredicted RBP18.22■□□□□ 0.51
POLR2J3-221ENST00000621093 EEA1Q15075 1411 aa18.22■□□□□ 0.51
POLR2J3-221ENST00000621093 CARMIL1Q5VZK9 1371 aa18.21■□□□□ 0.51
POLR2J3-221ENST00000621093 GRIN2AQ12879 1464 aa18.2■□□□□ 0.5
POLR2J3-221ENST00000621093 CSRNP3Q8WYN3 585 aa18.19■□□□□ 0.5
POLR2J3-221ENST00000621093 CEP170Q5SW79 1584 aa18.16■□□□□ 0.5
POLR2J3-221ENST00000621093 PRXQ9BXM0 1461 aa18.15■□□□□ 0.5
POLR2J3-221ENST00000621093 RAPGEF2Q9Y4G8 1499 aa18.14■□□□□ 0.5
POLR2J3-221ENST00000621093 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
POLR2J3-221ENST00000621093 KIF21BO75037 1637 aa18.1■□□□□ 0.49
POLR2J3-221ENST00000621093 NUP160Q12769 1436 aa18.1■□□□□ 0.49
POLR2J3-221ENST00000621093 CLASP1Q7Z460 1538 aa18.09■□□□□ 0.49
POLR2J3-221ENST00000621093 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
POLR2J3-221ENST00000621093 CTTNBP2Q8WZ74 1663 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms