RNA–Protein interactions for RNA: ENST00000620706.1

UBXN8-210, Transcript of UBX domain protein 8, humanhuman

TSL 3

Gene UBXN8, Length 654 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-210ENST00000620706 NISCHQ9Y2I1 1504 aa21.57■■□□□ 1.04
UBXN8-210ENST00000620706 ABCC9O60706 1549 aa21.22■□□□□ 0.99
UBXN8-210ENST00000620706 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
UBXN8-210ENST00000620706 DNAJC5Q9H3Z4 198 aa20.21■□□□□ 0.83
UBXN8-210ENST00000620706 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
UBXN8-210ENST00000620706 PABPN1Q86U42 306 aaKnown RBP eCLIP19.68■□□□□ 0.74
UBXN8-210ENST00000620706 RB1CC1Q8TDY2 1594 aa19.51■□□□□ 0.71
UBXN8-210ENST00000620706 CECR2Q9BXF3 1484 aa19.21■□□□□ 0.67
UBXN8-210ENST00000620706 DCAF8L2P0C7V8 631 aa19.11■□□□□ 0.65
UBXN8-210ENST00000620706 NACADO15069 1562 aa19.06■□□□□ 0.64
UBXN8-210ENST00000620706 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
UBXN8-210ENST00000620706 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
UBXN8-210ENST00000620706 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
UBXN8-210ENST00000620706 TRIM41Q8WV44 630 aa18.96■□□□□ 0.63
UBXN8-210ENST00000620706 CUX2O14529 1486 aa18.67■□□□□ 0.58
UBXN8-210ENST00000620706 EIF4G1Q04637 1599 aaKnown RBP18.63■□□□□ 0.57
UBXN8-210ENST00000620706 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
UBXN8-210ENST00000620706 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
UBXN8-210ENST00000620706 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
UBXN8-210ENST00000620706 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
UBXN8-210ENST00000620706 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
UBXN8-210ENST00000620706 NESP48681 1621 aa17.86■□□□□ 0.45
UBXN8-210ENST00000620706 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
UBXN8-210ENST00000620706 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
UBXN8-210ENST00000620706 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
UBXN8-210ENST00000620706 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
UBXN8-210ENST00000620706 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
UBXN8-210ENST00000620706 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
UBXN8-210ENST00000620706 BAZ1AQ9NRL2 1556 aaPredicted RBP17.61■□□□□ 0.41
UBXN8-210ENST00000620706 ILDR1Q86SU0 546 aaPredicted RBP17.59■□□□□ 0.41
UBXN8-210ENST00000620706 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
UBXN8-210ENST00000620706 RIMBP3CA6NJZ7 1639 aa17.55■□□□□ 0.4
UBXN8-210ENST00000620706 RIMBP3BA6NNM3 1639 aa17.55■□□□□ 0.4
UBXN8-210ENST00000620706 RIMBP3Q9UFD9 1639 aa17.55■□□□□ 0.4
UBXN8-210ENST00000620706 CYB5RLQ6IPT4 315 aa17.52■□□□□ 0.4
UBXN8-210ENST00000620706 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
UBXN8-210ENST00000620706 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
UBXN8-210ENST00000620706 ATAD2BQ9ULI0 1458 aa17.44■□□□□ 0.38
UBXN8-210ENST00000620706 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
UBXN8-210ENST00000620706 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
UBXN8-210ENST00000620706 MRC2Q9UBG0 1479 aa17.33■□□□□ 0.37
UBXN8-210ENST00000620706 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
UBXN8-210ENST00000620706 WDR62O43379 1518 aa17.26■□□□□ 0.35
UBXN8-210ENST00000620706 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
UBXN8-210ENST00000620706 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
UBXN8-210ENST00000620706 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
UBXN8-210ENST00000620706 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
UBXN8-210ENST00000620706 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
UBXN8-210ENST00000620706 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
UBXN8-210ENST00000620706 FBLN2P98095 1184 aa16.9■□□□□ 0.3
UBXN8-210ENST00000620706 ZNF608Q9ULD9 1512 aaPredicted RBP16.87■□□□□ 0.29
UBXN8-210ENST00000620706 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
UBXN8-210ENST00000620706 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
UBXN8-210ENST00000620706 PEG3Q9GZU2 1588 aa16.82■□□□□ 0.28
UBXN8-210ENST00000620706 KDM4FA0A1W2PPD8 638 aa16.79■□□□□ 0.28
UBXN8-210ENST00000620706 CHD1O14646 1710 aa16.73■□□□□ 0.27
UBXN8-210ENST00000620706 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
UBXN8-210ENST00000620706 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
UBXN8-210ENST00000620706 FBXO41Q8TF61 875 aa16.63■□□□□ 0.25
UBXN8-210ENST00000620706 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
UBXN8-210ENST00000620706 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.25
UBXN8-210ENST00000620706 CFTRP13569 1480 aa16.6■□□□□ 0.25
UBXN8-210ENST00000620706 LMTK3Q96Q04 1460 aa16.58■□□□□ 0.24
UBXN8-210ENST00000620706 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
UBXN8-210ENST00000620706 SOCS7O14512 581 aa16.5■□□□□ 0.23
UBXN8-210ENST00000620706 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
UBXN8-210ENST00000620706 CLASP1Q7Z460 1538 aa16.49■□□□□ 0.23
UBXN8-210ENST00000620706 ERCC6L2Q5T890 1561 aa16.48■□□□□ 0.23
UBXN8-210ENST00000620706 ILDR2Q71H61 639 aa16.43■□□□□ 0.22
UBXN8-210ENST00000620706 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
UBXN8-210ENST00000620706 HECW2Q9P2P5 1572 aa16.43■□□□□ 0.22
UBXN8-210ENST00000620706 SYNJ1O43426 1573 aa16.41■□□□□ 0.22
UBXN8-210ENST00000620706 FAM69CQ0P6D2 419 aa16.39■□□□□ 0.21
UBXN8-210ENST00000620706 WIZO95785 1651 aa16.38■□□□□ 0.21
UBXN8-210ENST00000620706 KIF13AQ9H1H9 1805 aa16.37■□□□□ 0.21
UBXN8-210ENST00000620706 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
UBXN8-210ENST00000620706 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
UBXN8-210ENST00000620706 TARBP1Q13395 1621 aaKnown RBP16.32■□□□□ 0.2
UBXN8-210ENST00000620706 SYNJ2O15056 1496 aa16.3■□□□□ 0.2
UBXN8-210ENST00000620706 DISP3Q9P2K9 1392 aa16.29■□□□□ 0.2
UBXN8-210ENST00000620706 KDM6BO15054 1643 aa16.29■□□□□ 0.2
UBXN8-210ENST00000620706 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
UBXN8-210ENST00000620706 ADGRL1O94910 1474 aa16.28■□□□□ 0.2
UBXN8-210ENST00000620706 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
UBXN8-210ENST00000620706 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.19
UBXN8-210ENST00000620706 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
UBXN8-210ENST00000620706 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
UBXN8-210ENST00000620706 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
UBXN8-210ENST00000620706 ABCC10Q5T3U5 1492 aa16.18■□□□□ 0.18
UBXN8-210ENST00000620706 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
UBXN8-210ENST00000620706 SOGA1O94964 1423 aa16.18■□□□□ 0.18
UBXN8-210ENST00000620706 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
UBXN8-210ENST00000620706 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
UBXN8-210ENST00000620706 TSPOAP1O95153 1857 aa16.1■□□□□ 0.17
UBXN8-210ENST00000620706 DIP2BQ9P265 1576 aa16.05■□□□□ 0.16
UBXN8-210ENST00000620706 CEP170Q5SW79 1584 aa16.04■□□□□ 0.16
UBXN8-210ENST00000620706 TOP2AP11388 1531 aaKnown RBP16.03■□□□□ 0.16
UBXN8-210ENST00000620706 WDR97A6NE52 1622 aa15.97■□□□□ 0.15
UBXN8-210ENST00000620706 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.14
UBXN8-210ENST00000620706 MAPKBP1O60336 1514 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms