RNA–Protein interactions for RNA: ENST00000620262.1

PCDH18-208, Transcript of protocadherin 18, humanhuman

TSL 4

Gene PCDH18, Length 553 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-208ENST00000620262 AEBP2Q6ZN18 517 aaPredicted RBP23.86■■□□□ 1.41
PCDH18-208ENST00000620262 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
PCDH18-208ENST00000620262 NISCHQ9Y2I1 1504 aa21.01■□□□□ 0.95
PCDH18-208ENST00000620262 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
PCDH18-208ENST00000620262 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
PCDH18-208ENST00000620262 ABCC9O60706 1549 aa19.55■□□□□ 0.72
PCDH18-208ENST00000620262 CCDC180Q9P1Z9 1646 aa19.16■□□□□ 0.66
PCDH18-208ENST00000620262 FOXD1Q16676 465 aa18.96■□□□□ 0.63
PCDH18-208ENST00000620262 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
PCDH18-208ENST00000620262 RB1CC1Q8TDY2 1594 aa18.46■□□□□ 0.55
PCDH18-208ENST00000620262 NACADO15069 1562 aa18.23■□□□□ 0.51
PCDH18-208ENST00000620262 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
PCDH18-208ENST00000620262 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.48
PCDH18-208ENST00000620262 UNC13AQ9UPW8 1703 aa18.04■□□□□ 0.48
PCDH18-208ENST00000620262 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
PCDH18-208ENST00000620262 MYO15BQ96JP2 1530 aa17.89■□□□□ 0.45
PCDH18-208ENST00000620262 DNAJC5Q9H3Z4 198 aa17.81■□□□□ 0.44
PCDH18-208ENST00000620262 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
PCDH18-208ENST00000620262 SHROOM4Q9ULL8 1493 aa17.77■□□□□ 0.44
PCDH18-208ENST00000620262 ADRA2BP18089 450 aa17.73■□□□□ 0.43
PCDH18-208ENST00000620262 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
PCDH18-208ENST00000620262 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
PCDH18-208ENST00000620262 DCAF8L2P0C7V8 631 aa17.71■□□□□ 0.43
PCDH18-208ENST00000620262 CC2D2AQ9P2K1 1620 aa17.7■□□□□ 0.42
PCDH18-208ENST00000620262 MSH5O43196 834 aa17.69■□□□□ 0.42
PCDH18-208ENST00000620262 EIF4G1Q04637 1599 aaKnown RBP17.54■□□□□ 0.4
PCDH18-208ENST00000620262 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
PCDH18-208ENST00000620262 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
PCDH18-208ENST00000620262 SCRIBQ14160 1630 aa17.27■□□□□ 0.36
PCDH18-208ENST00000620262 CUX2O14529 1486 aa17.21■□□□□ 0.35
PCDH18-208ENST00000620262 POTEDQ86YR6 584 aa17.19■□□□□ 0.34
PCDH18-208ENST00000620262 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
PCDH18-208ENST00000620262 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
PCDH18-208ENST00000620262 THOC2Q8NI27 1593 aaKnown RBP16.68■□□□□ 0.26
PCDH18-208ENST00000620262 HMGXB3Q12766 1538 aa16.68■□□□□ 0.26
PCDH18-208ENST00000620262 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
PCDH18-208ENST00000620262 NESP48681 1621 aa16.64■□□□□ 0.25
PCDH18-208ENST00000620262 TRIM41Q8WV44 630 aa16.61■□□□□ 0.25
PCDH18-208ENST00000620262 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
PCDH18-208ENST00000620262 LAMC3Q9Y6N6 1575 aa16.54■□□□□ 0.24
PCDH18-208ENST00000620262 SMARCA4P51532 1647 aa16.5■□□□□ 0.23
PCDH18-208ENST00000620262 KIF21AQ7Z4S6 1674 aa16.45■□□□□ 0.22
PCDH18-208ENST00000620262 PEG3Q9GZU2 1588 aa16.44■□□□□ 0.22
PCDH18-208ENST00000620262 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
PCDH18-208ENST00000620262 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
PCDH18-208ENST00000620262 BAZ1AQ9NRL2 1556 aaPredicted RBP16.34■□□□□ 0.21
PCDH18-208ENST00000620262 WDR62O43379 1518 aa16.34■□□□□ 0.21
PCDH18-208ENST00000620262 MRC2Q9UBG0 1479 aa16.32■□□□□ 0.2
PCDH18-208ENST00000620262 MAPK8IP2Q13387 824 aaPredicted RBP16.26■□□□□ 0.19
PCDH18-208ENST00000620262 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
PCDH18-208ENST00000620262 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
PCDH18-208ENST00000620262 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
PCDH18-208ENST00000620262 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
PCDH18-208ENST00000620262 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
PCDH18-208ENST00000620262 RIMBP3CA6NJZ7 1639 aa16.12■□□□□ 0.17
PCDH18-208ENST00000620262 RIMBP3BA6NNM3 1639 aa16.12■□□□□ 0.17
PCDH18-208ENST00000620262 RIMBP3Q9UFD9 1639 aa16.12■□□□□ 0.17
PCDH18-208ENST00000620262 CEP164Q9UPV0 1460 aa16.11■□□□□ 0.17
PCDH18-208ENST00000620262 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
PCDH18-208ENST00000620262 ARHGEF11O15085 1522 aa16.02■□□□□ 0.15
PCDH18-208ENST00000620262 CFTRP13569 1480 aa15.98■□□□□ 0.15
PCDH18-208ENST00000620262 URB2Q14146 1524 aaKnown RBP15.96■□□□□ 0.15
PCDH18-208ENST00000620262 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
PCDH18-208ENST00000620262 WIZO95785 1651 aa15.89■□□□□ 0.13
PCDH18-208ENST00000620262 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
PCDH18-208ENST00000620262 CYB5RLQ6IPT4 315 aa15.83■□□□□ 0.12
PCDH18-208ENST00000620262 ARAP1Q96P48 1450 aa15.83■□□□□ 0.12
PCDH18-208ENST00000620262 ZNF608Q9ULD9 1512 aaPredicted RBP15.82■□□□□ 0.12
PCDH18-208ENST00000620262 RSF1Q96T23 1441 aaPredicted RBP15.79■□□□□ 0.12
PCDH18-208ENST00000620262 TRHP20396 242 aaPredicted RBP15.79■□□□□ 0.12
PCDH18-208ENST00000620262 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
PCDH18-208ENST00000620262 EIF4G3O43432 1585 aaKnown RBP15.74■□□□□ 0.11
PCDH18-208ENST00000620262 CHD1O14646 1710 aa15.71■□□□□ 0.11
PCDH18-208ENST00000620262 TOP2AP11388 1531 aaKnown RBP15.71■□□□□ 0.11
PCDH18-208ENST00000620262 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
PCDH18-208ENST00000620262 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
PCDH18-208ENST00000620262 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
PCDH18-208ENST00000620262 CNKSR2Q8WXI2 1034 aa15.6■□□□□ 0.09
PCDH18-208ENST00000620262 DNMBPQ6XZF7 1577 aa15.6■□□□□ 0.09
PCDH18-208ENST00000620262 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
PCDH18-208ENST00000620262 CLASP1Q7Z460 1538 aa15.58■□□□□ 0.09
PCDH18-208ENST00000620262 HOXD11P31277 338 aaPredicted RBP15.55■□□□□ 0.08
PCDH18-208ENST00000620262 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
PCDH18-208ENST00000620262 CCDC88BA6NC98 1476 aa15.5■□□□□ 0.07
PCDH18-208ENST00000620262 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
PCDH18-208ENST00000620262 FBLN2P98095 1184 aa15.49■□□□□ 0.07
PCDH18-208ENST00000620262 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
PCDH18-208ENST00000620262 DCAF8L1A6NGE4 600 aa15.48■□□□□ 0.07
PCDH18-208ENST00000620262 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
PCDH18-208ENST00000620262 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
PCDH18-208ENST00000620262 SNAPC4Q5SXM2 1469 aa15.43■□□□□ 0.06
PCDH18-208ENST00000620262 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
PCDH18-208ENST00000620262 RAD54L2Q9Y4B4 1467 aa15.39■□□□□ 0.05
PCDH18-208ENST00000620262 TDRD9Q8NDG6 1382 aaKnown RBP15.38■□□□□ 0.05
PCDH18-208ENST00000620262 SYNJ2O15056 1496 aa15.38■□□□□ 0.05
PCDH18-208ENST00000620262 SOGA1O94964 1423 aa15.37■□□□□ 0.05
PCDH18-208ENST00000620262 CHMP7Q8WUX9 453 aaPredicted RBP15.37■□□□□ 0.05
PCDH18-208ENST00000620262 GRIN2BQ13224 1484 aa15.34■□□□□ 0.05
PCDH18-208ENST00000620262 NCBP3Q53F19 620 aaKnown RBP15.32■□□□□ 0.04
PCDH18-208ENST00000620262 FGD5Q6ZNL6 1462 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms