RNA–Protein interactions for RNA: ENST00000620209.4

DDX52-215, Transcript of DExD-box helicase 52, humanhuman

TSL 2

Gene DDX52, Length 3,123 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52-215ENST00000620209 NISCHQ9Y2I1 1504 aa13.66□□□□□ -0.22
DDX52-215ENST00000620209 CCDC180Q9P1Z9 1646 aa12.3□□□□□ -0.44
DDX52-215ENST00000620209 MYO15BQ96JP2 1530 aa11.53□□□□□ -0.56
DDX52-215ENST00000620209 DCAF1Q9Y4B6 1507 aa11.5□□□□□ -0.57
DDX52-215ENST00000620209 ABCC9O60706 1549 aa11.48□□□□□ -0.57
DDX52-215ENST00000620209 NACADO15069 1562 aa11.44□□□□□ -0.58
DDX52-215ENST00000620209 ZCCHC6Q5VYS8 1495 aaKnown RBP11.43□□□□□ -0.58
DDX52-215ENST00000620209 RB1CC1Q8TDY2 1594 aa11.38□□□□□ -0.59
DDX52-215ENST00000620209 UNC13AQ9UPW8 1703 aa11.14□□□□□ -0.63
DDX52-215ENST00000620209 SHROOM4Q9ULL8 1493 aa11.11□□□□□ -0.63
DDX52-215ENST00000620209 BICRAQ9NZM4 1560 aa10.95□□□□□ -0.66
DDX52-215ENST00000620209 DCAF8L2P0C7V8 631 aa10.93□□□□□ -0.66
DDX52-215ENST00000620209 SCRIBQ14160 1630 aa10.93□□□□□ -0.66
DDX52-215ENST00000620209 EIF4G1Q04637 1599 aaKnown RBP10.64□□□□□ -0.71
DDX52-215ENST00000620209 BAZ1AQ9NRL2 1556 aaPredicted RBP10.63□□□□□ -0.71
DDX52-215ENST00000620209 PABPN1Q86U42 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
DDX52-215ENST00000620209 PEG3Q9GZU2 1588 aa10.6□□□□□ -0.71
DDX52-215ENST00000620209 SMARCA4P51532 1647 aa10.6□□□□□ -0.71
DDX52-215ENST00000620209 SMARCA2P51531 1590 aa10.54□□□□□ -0.72
DDX52-215ENST00000620209 CC2D2AQ9P2K1 1620 aa10.54□□□□□ -0.72
DDX52-215ENST00000620209 HMGXB3Q12766 1538 aa10.51□□□□□ -0.73
DDX52-215ENST00000620209 NCAPD3P42695 1498 aa10.47□□□□□ -0.73
DDX52-215ENST00000620209 CECR2Q9BXF3 1484 aa10.46□□□□□ -0.73
DDX52-215ENST00000620209 MROH2BQ7Z745 1585 aa10.43□□□□□ -0.74
DDX52-215ENST00000620209 ATAD2BQ9ULI0 1458 aa10.43□□□□□ -0.74
DDX52-215ENST00000620209 RSF1Q96T23 1441 aaPredicted RBP10.37□□□□□ -0.75
DDX52-215ENST00000620209 TOP2AP11388 1531 aaKnown RBP10.36□□□□□ -0.75
DDX52-215ENST00000620209 WIZO95785 1651 aa10.35□□□□□ -0.75
DDX52-215ENST00000620209 BAZ1BQ9UIG0 1483 aaKnown RBP10.35□□□□□ -0.75
DDX52-215ENST00000620209 PRDM2Q13029 1718 aa10.3□□□□□ -0.76
DDX52-215ENST00000620209 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.76
DDX52-215ENST00000620209 LAMC3Q9Y6N6 1575 aa10.24□□□□□ -0.77
DDX52-215ENST00000620209 CFTRP13569 1480 aa10.12□□□□□ -0.79
DDX52-215ENST00000620209 CCDC88BA6NC98 1476 aa10.11□□□□□ -0.79
DDX52-215ENST00000620209 CADPSQ9ULU8 1353 aa10.1□□□□□ -0.79
DDX52-215ENST00000620209 PDS5BQ9NTI5 1447 aa10.06□□□□□ -0.8
DDX52-215ENST00000620209 KIF21AQ7Z4S6 1674 aa10.04□□□□□ -0.8
DDX52-215ENST00000620209 ABCC8Q09428 1581 aa10.01□□□□□ -0.81
DDX52-215ENST00000620209 THOC2Q8NI27 1593 aaKnown RBP10□□□□□ -0.81
DDX52-215ENST00000620209 CEP164Q9UPV0 1460 aa9.98□□□□□ -0.81
DDX52-215ENST00000620209 WDR62O43379 1518 aa9.97□□□□□ -0.81
DDX52-215ENST00000620209 NESP48681 1621 aa9.97□□□□□ -0.81
DDX52-215ENST00000620209 CUX2O14529 1486 aa9.97□□□□□ -0.81
DDX52-215ENST00000620209 FANCD2Q9BXW9 1451 aa9.97□□□□□ -0.81
DDX52-215ENST00000620209 MRC2Q9UBG0 1479 aa9.96□□□□□ -0.82
DDX52-215ENST00000620209 SUPT5HO00267 1087 aaKnown RBP9.95□□□□□ -0.82
DDX52-215ENST00000620209 WDR97A6NE52 1622 aa9.94□□□□□ -0.82
DDX52-215ENST00000620209 ERCC6Q03468 1493 aa9.94□□□□□ -0.82
DDX52-215ENST00000620209 DNMBPQ6XZF7 1577 aa9.93□□□□□ -0.82
DDX52-215ENST00000620209 BIVM-ERCC5R4GMW8 1640 aa9.92□□□□□ -0.82
DDX52-215ENST00000620209 TOP2BQ02880 1626 aa9.87□□□□□ -0.83
DDX52-215ENST00000620209 URB2Q14146 1524 aaKnown RBP9.85□□□□□ -0.83
DDX52-215ENST00000620209 TOPBP1Q92547 1522 aa9.85□□□□□ -0.83
DDX52-215ENST00000620209 CUX1P39880 1505 aa9.81□□□□□ -0.84
DDX52-215ENST00000620209 IFT140Q96RY7 1462 aa9.81□□□□□ -0.84
DDX52-215ENST00000620209 TARBP1Q13395 1621 aaKnown RBP9.8□□□□□ -0.84
DDX52-215ENST00000620209 WRNQ14191 1432 aaPredicted RBP eCLIP9.79□□□□□ -0.84
DDX52-215ENST00000620209 SYNJ1O43426 1573 aa9.77□□□□□ -0.85
DDX52-215ENST00000620209 POLA1P09884 1462 aaPredicted RBP9.75□□□□□ -0.85
DDX52-215ENST00000620209 ABCA10Q8WWZ4 1543 aa9.74□□□□□ -0.85
DDX52-215ENST00000620209 FGD5Q6ZNL6 1462 aa9.74□□□□□ -0.85
DDX52-215ENST00000620209 ABCA5Q8WWZ7 1642 aa9.73□□□□□ -0.85
DDX52-215ENST00000620209 PBRM1Q86U86 1689 aa9.71□□□□□ -0.85
DDX52-215ENST00000620209 EIF4G3O43432 1585 aaKnown RBP9.7□□□□□ -0.86
DDX52-215ENST00000620209 SOGA1O94964 1423 aa9.68□□□□□ -0.86
DDX52-215ENST00000620209 ERICH3Q5RHP9 1530 aa9.68□□□□□ -0.86
DDX52-215ENST00000620209 CUL7Q14999 1698 aa9.67□□□□□ -0.86
DDX52-215ENST00000620209 MAGI1Q96QZ7 1491 aaPredicted RBP9.65□□□□□ -0.87
DDX52-215ENST00000620209 EEA1Q15075 1411 aa9.64□□□□□ -0.87
DDX52-215ENST00000620209 GRIN2BQ13224 1484 aa9.64□□□□□ -0.87
DDX52-215ENST00000620209 GAPVD1Q14C86 1478 aa9.61□□□□□ -0.87
DDX52-215ENST00000620209 KIF27Q86VH2 1401 aa9.6□□□□□ -0.87
DDX52-215ENST00000620209 RAD54L2Q9Y4B4 1467 aa9.6□□□□□ -0.87
DDX52-215ENST00000620209 ADAMTS12P58397 1594 aa9.6□□□□□ -0.87
DDX52-215ENST00000620209 ZNF608Q9ULD9 1512 aaPredicted RBP9.58□□□□□ -0.88
DDX52-215ENST00000620209 CHD1O14646 1710 aa9.57□□□□□ -0.88
DDX52-215ENST00000620209 SYNJ2O15056 1496 aa9.56□□□□□ -0.88
DDX52-215ENST00000620209 FHAD1B1AJZ9 1412 aa9.55□□□□□ -0.88
DDX52-215ENST00000620209 KIF21BO75037 1637 aa9.53□□□□□ -0.88
DDX52-215ENST00000620209 AQRO60306 1485 aaKnown RBP eCLIP9.53□□□□□ -0.881e-8■■■■■ 28.7
DDX52-215ENST00000620209 TRIM41Q8WV44 630 aa9.52□□□□□ -0.89
DDX52-215ENST00000620209 SNAPC4Q5SXM2 1469 aa9.52□□□□□ -0.89
DDX52-215ENST00000620209 CTTNBP2Q8WZ74 1663 aa9.5□□□□□ -0.89
DDX52-215ENST00000620209 CHIC1Q5VXU3 224 aa9.5□□□□□ -0.89
DDX52-215ENST00000620209 TDRD9Q8NDG6 1382 aaKnown RBP9.5□□□□□ -0.89
DDX52-215ENST00000620209 GRIN2AQ12879 1464 aa9.49□□□□□ -0.89
DDX52-215ENST00000620209 CLASP1Q7Z460 1538 aa9.49□□□□□ -0.89
DDX52-215ENST00000620209 SHROOM2Q13796 1616 aa9.48□□□□□ -0.89
DDX52-215ENST00000620209 IGF1RP08069 1367 aa9.48□□□□□ -0.89
DDX52-215ENST00000620209 NUP160Q12769 1436 aa9.48□□□□□ -0.89
DDX52-215ENST00000620209 PRXQ9BXM0 1461 aa9.47□□□□□ -0.89
DDX52-215ENST00000620209 RAPGEF2Q9Y4G8 1499 aa9.46□□□□□ -0.89
DDX52-215ENST00000620209 RUSC2Q8N2Y8 1516 aa9.45□□□□□ -0.9
DDX52-215ENST00000620209 CARMIL1Q5VZK9 1371 aa9.44□□□□□ -0.9
DDX52-215ENST00000620209 CEP170Q5SW79 1584 aa9.43□□□□□ -0.9
DDX52-215ENST00000620209 KIAA0586Q9BVV6 1533 aa9.42□□□□□ -0.9
DDX52-215ENST00000620209 IQGAP2Q13576 1575 aa9.4□□□□□ -0.91
DDX52-215ENST00000620209 OSCARQ8IYS5 282 aa9.39□□□□□ -0.91
DDX52-215ENST00000620209 CSRNP3Q8WYN3 585 aa9.39□□□□□ -0.91
DDX52-215ENST00000620209 UGGT2Q9NYU1 1516 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms