RNA–Protein interactions for RNA: ENST00000619554.1

NBPF3-213, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 1,831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-213ENST00000619554 NISCHQ9Y2I1 1504 aa24.47■■□□□ 1.51
NBPF3-213ENST00000619554 CCDC180Q9P1Z9 1646 aa21.52■■□□□ 1.03
NBPF3-213ENST00000619554 ABCC9O60706 1549 aa20.92■□□□□ 0.94
NBPF3-213ENST00000619554 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
NBPF3-213ENST00000619554 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
NBPF3-213ENST00000619554 NACADO15069 1562 aa20.26■□□□□ 0.83
NBPF3-213ENST00000619554 DCAF1Q9Y4B6 1507 aa20.24■□□□□ 0.83
NBPF3-213ENST00000619554 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
NBPF3-213ENST00000619554 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
NBPF3-213ENST00000619554 SCRIBQ14160 1630 aa19.74■□□□□ 0.75
NBPF3-213ENST00000619554 PABPN1Q86U42 306 aaKnown RBP eCLIP19.68■□□□□ 0.74
NBPF3-213ENST00000619554 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
NBPF3-213ENST00000619554 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
NBPF3-213ENST00000619554 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
NBPF3-213ENST00000619554 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
NBPF3-213ENST00000619554 EIF4G1Q04637 1599 aaKnown RBP19.03■□□□□ 0.64
NBPF3-213ENST00000619554 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
NBPF3-213ENST00000619554 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
NBPF3-213ENST00000619554 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
NBPF3-213ENST00000619554 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
NBPF3-213ENST00000619554 MROH2BQ7Z745 1585 aa18.86■□□□□ 0.61
NBPF3-213ENST00000619554 RSF1Q96T23 1441 aaPredicted RBP18.8■□□□□ 0.6
NBPF3-213ENST00000619554 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
NBPF3-213ENST00000619554 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
NBPF3-213ENST00000619554 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
NBPF3-213ENST00000619554 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
NBPF3-213ENST00000619554 PEG3Q9GZU2 1588 aa18.67■□□□□ 0.58
NBPF3-213ENST00000619554 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
NBPF3-213ENST00000619554 WIZO95785 1651 aa18.61■□□□□ 0.57
NBPF3-213ENST00000619554 HMGXB3Q12766 1538 aa18.6■□□□□ 0.57
NBPF3-213ENST00000619554 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
NBPF3-213ENST00000619554 CCDC88BA6NC98 1476 aa18.3■□□□□ 0.52
NBPF3-213ENST00000619554 CADPSQ9ULU8 1353 aa18.24■□□□□ 0.51
NBPF3-213ENST00000619554 NESP48681 1621 aa18.15■□□□□ 0.5
NBPF3-213ENST00000619554 CFTRP13569 1480 aa18.15■□□□□ 0.5
NBPF3-213ENST00000619554 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
NBPF3-213ENST00000619554 PDS5BQ9NTI5 1447 aa18.12■□□□□ 0.49
NBPF3-213ENST00000619554 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
NBPF3-213ENST00000619554 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
NBPF3-213ENST00000619554 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
NBPF3-213ENST00000619554 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
NBPF3-213ENST00000619554 KIF21AQ7Z4S6 1674 aa17.83■□□□□ 0.45
NBPF3-213ENST00000619554 PRDM2Q13029 1718 aa17.83■□□□□ 0.44
NBPF3-213ENST00000619554 ABCC8Q09428 1581 aa17.78■□□□□ 0.44
NBPF3-213ENST00000619554 WRNQ14191 1432 aaPredicted RBP eCLIP17.75■□□□□ 0.43
NBPF3-213ENST00000619554 URB2Q14146 1524 aaKnown RBP17.75■□□□□ 0.43
NBPF3-213ENST00000619554 WDR62O43379 1518 aa17.72■□□□□ 0.43
NBPF3-213ENST00000619554 THOC2Q8NI27 1593 aaKnown RBP17.72■□□□□ 0.43
NBPF3-213ENST00000619554 TOPBP1Q92547 1522 aa17.71■□□□□ 0.43
NBPF3-213ENST00000619554 CUX2O14529 1486 aa17.7■□□□□ 0.42
NBPF3-213ENST00000619554 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
NBPF3-213ENST00000619554 CUX1P39880 1505 aa17.67■□□□□ 0.42
NBPF3-213ENST00000619554 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
NBPF3-213ENST00000619554 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
NBPF3-213ENST00000619554 SOGA1O94964 1423 aa17.59■□□□□ 0.41
NBPF3-213ENST00000619554 POLA1P09884 1462 aaPredicted RBP17.59■□□□□ 0.41
NBPF3-213ENST00000619554 TOP2BQ02880 1626 aa17.58■□□□□ 0.4
NBPF3-213ENST00000619554 IFT140Q96RY7 1462 aa17.57■□□□□ 0.4
NBPF3-213ENST00000619554 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
NBPF3-213ENST00000619554 CHIC1Q5VXU3 224 aa17.56■□□□□ 0.4
NBPF3-213ENST00000619554 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
NBPF3-213ENST00000619554 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
NBPF3-213ENST00000619554 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
NBPF3-213ENST00000619554 ABCA10Q8WWZ4 1543 aa17.44■□□□□ 0.38
NBPF3-213ENST00000619554 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
NBPF3-213ENST00000619554 TARBP1Q13395 1621 aaKnown RBP17.42■□□□□ 0.38
NBPF3-213ENST00000619554 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.38
NBPF3-213ENST00000619554 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
NBPF3-213ENST00000619554 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
NBPF3-213ENST00000619554 WDR97A6NE52 1622 aa17.33■□□□□ 0.37
NBPF3-213ENST00000619554 GRIN2BQ13224 1484 aa17.33■□□□□ 0.36
NBPF3-213ENST00000619554 EIF4G3O43432 1585 aaKnown RBP17.31■□□□□ 0.36
NBPF3-213ENST00000619554 FBLN2P98095 1184 aa17.27■□□□□ 0.36
NBPF3-213ENST00000619554 FAM9AQ8IZU1 332 aaPredicted RBP17.26■□□□□ 0.35
NBPF3-213ENST00000619554 IGF1RP08069 1367 aa17.26■□□□□ 0.35
NBPF3-213ENST00000619554 CHMP7Q8WUX9 453 aaPredicted RBP17.26■□□□□ 0.35
NBPF3-213ENST00000619554 ABCA5Q8WWZ7 1642 aa17.26■□□□□ 0.35
NBPF3-213ENST00000619554 EEA1Q15075 1411 aa17.24■□□□□ 0.35
NBPF3-213ENST00000619554 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
NBPF3-213ENST00000619554 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
NBPF3-213ENST00000619554 ERICH3Q5RHP9 1530 aa17.23■□□□□ 0.35
NBPF3-213ENST00000619554 MAGI1Q96QZ7 1491 aaPredicted RBP17.22■□□□□ 0.35
NBPF3-213ENST00000619554 RUSC2Q8N2Y8 1516 aa17.22■□□□□ 0.35
NBPF3-213ENST00000619554 FHAD1B1AJZ9 1412 aa17.19■□□□□ 0.34
NBPF3-213ENST00000619554 CARMIL1Q5VZK9 1371 aa17.18■□□□□ 0.34
NBPF3-213ENST00000619554 SYNJ2O15056 1496 aa17.16■□□□□ 0.34
NBPF3-213ENST00000619554 PBRM1Q86U86 1689 aa17.15■□□□□ 0.34
NBPF3-213ENST00000619554 OSCARQ8IYS5 282 aa17.14■□□□□ 0.34
NBPF3-213ENST00000619554 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
NBPF3-213ENST00000619554 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.33
NBPF3-213ENST00000619554 CUL7Q14999 1698 aa17.08■□□□□ 0.32
NBPF3-213ENST00000619554 GRIN2AQ12879 1464 aa17.07■□□□□ 0.32
NBPF3-213ENST00000619554 PRXQ9BXM0 1461 aa17.06■□□□□ 0.32
NBPF3-213ENST00000619554 EHMT2Q96KQ7 1210 aa17.03■□□□□ 0.32
NBPF3-213ENST00000619554 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
NBPF3-213ENST00000619554 CHD1O14646 1710 aa16.97■□□□□ 0.31
NBPF3-213ENST00000619554 NUP160Q12769 1436 aa16.97■□□□□ 0.31
NBPF3-213ENST00000619554 GOLGA3Q08378 1498 aa16.95■□□□□ 0.3
NBPF3-213ENST00000619554 KIF21BO75037 1637 aa16.93■□□□□ 0.3
NBPF3-213ENST00000619554 KIAA0586Q9BVV6 1533 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms