RNA–Protein interactions for RNA: ENST00000618837.4

GGNBP2-216, Transcript of gametogenetin binding protein 2, humanhuman

TSL 2

Gene GGNBP2, Length 2,346 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGNBP2-216ENST00000618837 NISCHQ9Y2I1 1504 aa40.06■■■■■ 4
GGNBP2-216ENST00000618837 CCDC180Q9P1Z9 1646 aa34.55■■■■□ 3.12
GGNBP2-216ENST00000618837 ZCCHC6Q5VYS8 1495 aaKnown RBP33.73■■■□□ 2.99
GGNBP2-216ENST00000618837 SHROOM4Q9ULL8 1493 aa33.31■■■□□ 2.92
GGNBP2-216ENST00000618837 DCAF8L2P0C7V8 631 aa33.25■■■□□ 2.91
GGNBP2-216ENST00000618837 DCAF1Q9Y4B6 1507 aa33■■■□□ 2.87
GGNBP2-216ENST00000618837 ABCC9O60706 1549 aa32.47■■■□□ 2.79
GGNBP2-216ENST00000618837 MYO15BQ96JP2 1530 aa32.39■■■□□ 2.78
GGNBP2-216ENST00000618837 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
GGNBP2-216ENST00000618837 NACADO15069 1562 aa32.12■■■□□ 2.73
GGNBP2-216ENST00000618837 SCRIBQ14160 1630 aa32.05■■■□□ 2.72
GGNBP2-216ENST00000618837 RB1CC1Q8TDY2 1594 aa31.75■■■□□ 2.67
GGNBP2-216ENST00000618837 RSF1Q96T23 1441 aaPredicted RBP31.34■■■□□ 2.61
GGNBP2-216ENST00000618837 CECR2Q9BXF3 1484 aa31.19■■■□□ 2.58
GGNBP2-216ENST00000618837 UNC13AQ9UPW8 1703 aa31.13■■■□□ 2.57
GGNBP2-216ENST00000618837 CHIC1Q5VXU3 224 aa31.13■■■□□ 2.57
GGNBP2-216ENST00000618837 MROH2BQ7Z745 1585 aa31.03■■■□□ 2.56
GGNBP2-216ENST00000618837 BAZ1AQ9NRL2 1556 aaPredicted RBP30.87■■■□□ 2.53
GGNBP2-216ENST00000618837 PABPN1Q86U42 306 aaKnown RBP eCLIP30.84■■■□□ 2.53
GGNBP2-216ENST00000618837 BICRAQ9NZM4 1560 aa30.81■■■□□ 2.52
GGNBP2-216ENST00000618837 WIZO95785 1651 aa30.81■■■□□ 2.52
GGNBP2-216ENST00000618837 SMARCA4P51532 1647 aa30.67■■■□□ 2.5
GGNBP2-216ENST00000618837 TOP2AP11388 1531 aaKnown RBP30.42■■■□□ 2.46
GGNBP2-216ENST00000618837 TRIM41Q8WV44 630 aa30.29■■■□□ 2.44
GGNBP2-216ENST00000618837 CCDC88BA6NC98 1476 aa30.21■■■□□ 2.43
GGNBP2-216ENST00000618837 PEG3Q9GZU2 1588 aa30.2■■■□□ 2.43
GGNBP2-216ENST00000618837 SMARCA2P51531 1590 aa30.18■■■□□ 2.42
GGNBP2-216ENST00000618837 ATAD2BQ9ULI0 1458 aa30.08■■■□□ 2.41
GGNBP2-216ENST00000618837 EIF4G1Q04637 1599 aaKnown RBP30.08■■■□□ 2.41
GGNBP2-216ENST00000618837 LOC105371045A0A1W2PR82 267 aa30.07■■■□□ 2.4
GGNBP2-216ENST00000618837 BAZ1BQ9UIG0 1483 aaKnown RBP29.95■■■□□ 2.39
GGNBP2-216ENST00000618837 FAM9AQ8IZU1 332 aaPredicted RBP29.87■■■□□ 2.37
GGNBP2-216ENST00000618837 ABCC8Q09428 1581 aa29.78■■■□□ 2.36
GGNBP2-216ENST00000618837 NCAPD3P42695 1498 aa29.69■■■□□ 2.34
GGNBP2-216ENST00000618837 HMGXB3Q12766 1538 aa29.64■■■□□ 2.33
GGNBP2-216ENST00000618837 EHMT2Q96KQ7 1210 aa29.53■■■□□ 2.32
GGNBP2-216ENST00000618837 WRNQ14191 1432 aaPredicted RBP eCLIP29.48■■■□□ 2.31
GGNBP2-216ENST00000618837 SOGA1O94964 1423 aa29.36■■■□□ 2.29
GGNBP2-216ENST00000618837 SYNJ1O43426 1573 aa29.32■■■□□ 2.28
GGNBP2-216ENST00000618837 CC2D2AQ9P2K1 1620 aa29.31■■■□□ 2.28
GGNBP2-216ENST00000618837 EEA1Q15075 1411 aa29.25■■■□□ 2.27
GGNBP2-216ENST00000618837 PCGF6Q9BYE7 350 aa29.25■■■□□ 2.27
GGNBP2-216ENST00000618837 RUSC2Q8N2Y8 1516 aa29.22■■■□□ 2.27
GGNBP2-216ENST00000618837 CFTRP13569 1480 aa29.2■■■□□ 2.27
GGNBP2-216ENST00000618837 CSRNP3Q8WYN3 585 aa29.2■■■□□ 2.26
GGNBP2-216ENST00000618837 TOP2BQ02880 1626 aa29.11■■■□□ 2.25
GGNBP2-216ENST00000618837 CADPSQ9ULU8 1353 aa29.03■■■□□ 2.24
GGNBP2-216ENST00000618837 BIVM-ERCC5R4GMW8 1640 aa29.03■■■□□ 2.24
GGNBP2-216ENST00000618837 TRIM26Q12899 539 aaPredicted RBP29.01■■■□□ 2.23
GGNBP2-216ENST00000618837 TNIKQ9UKE5 1360 aa28.96■■■□□ 2.23
GGNBP2-216ENST00000618837 CUX1P39880 1505 aa28.96■■■□□ 2.23
GGNBP2-216ENST00000618837 UBTFP17480 764 aaKnown RBP28.95■■■□□ 2.22
GGNBP2-216ENST00000618837 PRDM2Q13029 1718 aa28.94■■■□□ 2.22
GGNBP2-216ENST00000618837 GOLGA3Q08378 1498 aa28.93■■■□□ 2.22
GGNBP2-216ENST00000618837 CEP162Q5TB80 1403 aa28.88■■■□□ 2.21
GGNBP2-216ENST00000618837 CEP164Q9UPV0 1460 aa28.88■■■□□ 2.21
GGNBP2-216ENST00000618837 KIF21BO75037 1637 aa28.83■■■□□ 2.21
GGNBP2-216ENST00000618837 HRCP23327 699 aa28.74■■■□□ 2.19
GGNBP2-216ENST00000618837 FANCD2Q9BXW9 1451 aa28.71■■■□□ 2.19
GGNBP2-216ENST00000618837 RAPGEF2Q9Y4G8 1499 aa28.71■■■□□ 2.19
GGNBP2-216ENST00000618837 PPARGC1BQ86YN6 1023 aaKnown RBP28.69■■■□□ 2.18
GGNBP2-216ENST00000618837 KIF27Q86VH2 1401 aa28.68■■■□□ 2.18
GGNBP2-216ENST00000618837 NESP48681 1621 aa28.67■■■□□ 2.18
GGNBP2-216ENST00000618837 DNAJC5BQ9UF47 199 aa28.61■■■□□ 2.17
GGNBP2-216ENST00000618837 PRXQ9BXM0 1461 aa28.59■■■□□ 2.17
GGNBP2-216ENST00000618837 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
GGNBP2-216ENST00000618837 LAMC3Q9Y6N6 1575 aa28.56■■■□□ 2.16
GGNBP2-216ENST00000618837 ERICH3Q5RHP9 1530 aa28.55■■■□□ 2.16
GGNBP2-216ENST00000618837 CLIP1P30622 1438 aa28.54■■■□□ 2.16
GGNBP2-216ENST00000618837 CUX2O14529 1486 aa28.52■■■□□ 2.16
GGNBP2-216ENST00000618837 DNMBPQ6XZF7 1577 aa28.48■■■□□ 2.15
GGNBP2-216ENST00000618837 RANGAP1P46060 587 aaPredicted RBP28.45■■■□□ 2.14
GGNBP2-216ENST00000618837 TOPBP1Q92547 1522 aa28.44■■■□□ 2.14
GGNBP2-216ENST00000618837 IGF1RP08069 1367 aa28.41■■■□□ 2.14
GGNBP2-216ENST00000618837 PDS5BQ9NTI5 1447 aa28.4■■■□□ 2.14
GGNBP2-216ENST00000618837 TTBK1Q5TCY1 1321 aaPredicted RBP28.37■■■□□ 2.13
GGNBP2-216ENST00000618837 POLA1P09884 1462 aaPredicted RBP28.36■■■□□ 2.13
GGNBP2-216ENST00000618837 RAD54L2Q9Y4B4 1467 aa28.34■■■□□ 2.13
GGNBP2-216ENST00000618837 VPS8Q8N3P4 1428 aa28.33■■■□□ 2.13
GGNBP2-216ENST00000618837 URB2Q14146 1524 aaKnown RBP28.32■■■□□ 2.12
GGNBP2-216ENST00000618837 ABCA10Q8WWZ4 1543 aa28.28■■■□□ 2.12
GGNBP2-216ENST00000618837 CARMIL1Q5VZK9 1371 aa28.28■■■□□ 2.12
GGNBP2-216ENST00000618837 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
GGNBP2-216ENST00000618837 APLP2Q06481 763 aa28.18■■■□□ 2.1
GGNBP2-216ENST00000618837 ARAP1Q96P48 1450 aa28.16■■■□□ 2.1
GGNBP2-216ENST00000618837 WDR97A6NE52 1622 aa28.08■■■□□ 2.08
GGNBP2-216ENST00000618837 ARHGAP35Q9NRY4 1499 aa28.07■■■□□ 2.08
GGNBP2-216ENST00000618837 ZEB1P37275 1124 aaPredicted RBP28.07■■■□□ 2.08
GGNBP2-216ENST00000618837 TDRD9Q8NDG6 1382 aaKnown RBP28.05■■■□□ 2.08
GGNBP2-216ENST00000618837 CUL7Q14999 1698 aa28.01■■■□□ 2.07
GGNBP2-216ENST00000618837 GAPVD1Q14C86 1478 aa27.98■■■□□ 2.07
GGNBP2-216ENST00000618837 MRC2Q9UBG0 1479 aa27.98■■■□□ 2.07
GGNBP2-216ENST00000618837 ABCA5Q8WWZ7 1642 aa27.98■■■□□ 2.07
GGNBP2-216ENST00000618837 TARBP1Q13395 1621 aaKnown RBP27.93■■■□□ 2.06
GGNBP2-216ENST00000618837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.91■■■□□ 2.06
GGNBP2-216ENST00000618837 KANK4Q5T7N3 995 aaPredicted RBP27.84■■■□□ 2.05
GGNBP2-216ENST00000618837 CCER1Q8TC90 406 aaPredicted RBP27.84■■■□□ 2.05
GGNBP2-216ENST00000618837 P3H3Q8IVL6 736 aa27.8■■■□□ 2.04
GGNBP2-216ENST00000618837 CTTNBP2Q8WZ74 1663 aa27.78■■■□□ 2.04
GGNBP2-216ENST00000618837 WDR62O43379 1518 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms