RNA–Protein interactions for RNA: ENST00000618553.1

APOBEC3A-205, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-205ENST00000618553 AEBP2Q6ZN18 517 aaPredicted RBP32.2■■■□□ 2.75
APOBEC3A-205ENST00000618553 NISCHQ9Y2I1 1504 aa30.93■■■□□ 2.54
APOBEC3A-205ENST00000618553 CHIC1Q5VXU3 224 aa30.31■■■□□ 2.44
APOBEC3A-205ENST00000618553 CCDC180Q9P1Z9 1646 aa27.33■■□□□ 1.97
APOBEC3A-205ENST00000618553 SENP3Q9H4L4 574 aaPredicted RBP27.31■■□□□ 1.96
APOBEC3A-205ENST00000618553 ABCC9O60706 1549 aa27.13■■□□□ 1.93
APOBEC3A-205ENST00000618553 PHF23Q9BUL5 403 aaPredicted RBP27.03■■□□□ 1.92
APOBEC3A-205ENST00000618553 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
APOBEC3A-205ENST00000618553 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
APOBEC3A-205ENST00000618553 DCAF1Q9Y4B6 1507 aa25.72■■□□□ 1.71
APOBEC3A-205ENST00000618553 MYO15BQ96JP2 1530 aa25.62■■□□□ 1.69
APOBEC3A-205ENST00000618553 FOXD1Q16676 465 aa25.6■■□□□ 1.69
APOBEC3A-205ENST00000618553 RB1CC1Q8TDY2 1594 aa25.59■■□□□ 1.69
APOBEC3A-205ENST00000618553 NACADO15069 1562 aa25.49■■□□□ 1.67
APOBEC3A-205ENST00000618553 DCAF8L2P0C7V8 631 aa25.27■■□□□ 1.64
APOBEC3A-205ENST00000618553 PABPN1Q86U42 306 aaKnown RBP eCLIP25.22■■□□□ 1.63
APOBEC3A-205ENST00000618553 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
APOBEC3A-205ENST00000618553 BICRAQ9NZM4 1560 aa24.95■■□□□ 1.58
APOBEC3A-205ENST00000618553 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
APOBEC3A-205ENST00000618553 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.52
APOBEC3A-205ENST00000618553 CC2D2AQ9P2K1 1620 aa24.49■■□□□ 1.51
APOBEC3A-205ENST00000618553 CECR2Q9BXF3 1484 aa24.44■■□□□ 1.5
APOBEC3A-205ENST00000618553 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
APOBEC3A-205ENST00000618553 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.45
APOBEC3A-205ENST00000618553 BAZ1AQ9NRL2 1556 aaPredicted RBP23.94■■□□□ 1.42
APOBEC3A-205ENST00000618553 DNAJC5Q9H3Z4 198 aa23.93■■□□□ 1.42
APOBEC3A-205ENST00000618553 PPP6R1Q9UPN7 881 aa23.89■■□□□ 1.41
APOBEC3A-205ENST00000618553 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
APOBEC3A-205ENST00000618553 MSH5O43196 834 aa23.87■■□□□ 1.41
APOBEC3A-205ENST00000618553 PIAS4Q8N2W9 510 aaPredicted RBP23.82■■□□□ 1.4
APOBEC3A-205ENST00000618553 MROH2BQ7Z745 1585 aa23.81■■□□□ 1.4
APOBEC3A-205ENST00000618553 ADRA2BP18089 450 aa23.78■■□□□ 1.4
APOBEC3A-205ENST00000618553 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
APOBEC3A-205ENST00000618553 PEG3Q9GZU2 1588 aa23.72■■□□□ 1.39
APOBEC3A-205ENST00000618553 POTEDQ86YR6 584 aa23.7■■□□□ 1.38
APOBEC3A-205ENST00000618553 SMARCA2P51531 1590 aa23.61■■□□□ 1.37
APOBEC3A-205ENST00000618553 WIZO95785 1651 aa23.58■■□□□ 1.37
APOBEC3A-205ENST00000618553 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
APOBEC3A-205ENST00000618553 NCAPD3P42695 1498 aa23.49■■□□□ 1.35
APOBEC3A-205ENST00000618553 HMGXB3Q12766 1538 aa23.48■■□□□ 1.35
APOBEC3A-205ENST00000618553 CUX2O14529 1486 aa23.45■■□□□ 1.34
APOBEC3A-205ENST00000618553 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
APOBEC3A-205ENST00000618553 SUPT5HO00267 1087 aaKnown RBP23.4■■□□□ 1.34
APOBEC3A-205ENST00000618553 ERCC6Q03468 1493 aa23.38■■□□□ 1.33
APOBEC3A-205ENST00000618553 BAZ1BQ9UIG0 1483 aaKnown RBP23.37■■□□□ 1.33
APOBEC3A-205ENST00000618553 NESP48681 1621 aa23.23■■□□□ 1.31
APOBEC3A-205ENST00000618553 CCDC88BA6NC98 1476 aa23.07■■□□□ 1.28
APOBEC3A-205ENST00000618553 THOC2Q8NI27 1593 aaKnown RBP23.04■■□□□ 1.28
APOBEC3A-205ENST00000618553 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
APOBEC3A-205ENST00000618553 LAMC3Q9Y6N6 1575 aa22.92■■□□□ 1.26
APOBEC3A-205ENST00000618553 CFTRP13569 1480 aa22.82■■□□□ 1.24
APOBEC3A-205ENST00000618553 PRDM2Q13029 1718 aa22.81■■□□□ 1.24
APOBEC3A-205ENST00000618553 CADPSQ9ULU8 1353 aa22.77■■□□□ 1.24
APOBEC3A-205ENST00000618553 PDS5BQ9NTI5 1447 aa22.77■■□□□ 1.24
APOBEC3A-205ENST00000618553 TRIM41Q8WV44 630 aa22.75■■□□□ 1.23
APOBEC3A-205ENST00000618553 MRC2Q9UBG0 1479 aa22.62■■□□□ 1.21
APOBEC3A-205ENST00000618553 WDR62O43379 1518 aa22.59■■□□□ 1.21
APOBEC3A-205ENST00000618553 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
APOBEC3A-205ENST00000618553 CEP164Q9UPV0 1460 aa22.46■■□□□ 1.19
APOBEC3A-205ENST00000618553 ABCC8Q09428 1581 aa22.4■■□□□ 1.18
APOBEC3A-205ENST00000618553 WRNQ14191 1432 aaPredicted RBP eCLIP22.36■■□□□ 1.17
APOBEC3A-205ENST00000618553 OSCARQ8IYS5 282 aa22.35■■□□□ 1.17
APOBEC3A-205ENST00000618553 BIVM-ERCC5R4GMW8 1640 aa22.35■■□□□ 1.17
APOBEC3A-205ENST00000618553 TOP2BQ02880 1626 aa22.32■■□□□ 1.16
APOBEC3A-205ENST00000618553 CUX1P39880 1505 aa22.31■■□□□ 1.16
APOBEC3A-205ENST00000618553 SYNJ1O43426 1573 aa22.31■■□□□ 1.16
APOBEC3A-205ENST00000618553 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
APOBEC3A-205ENST00000618553 URB2Q14146 1524 aaKnown RBP22.3■■□□□ 1.16
APOBEC3A-205ENST00000618553 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
APOBEC3A-205ENST00000618553 RIMBP3CA6NJZ7 1639 aa22.17■■□□□ 1.14
APOBEC3A-205ENST00000618553 RIMBP3BA6NNM3 1639 aa22.17■■□□□ 1.14
APOBEC3A-205ENST00000618553 RIMBP3Q9UFD9 1639 aa22.17■■□□□ 1.14
APOBEC3A-205ENST00000618553 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
APOBEC3A-205ENST00000618553 POLA1P09884 1462 aaPredicted RBP22.1■■□□□ 1.13
APOBEC3A-205ENST00000618553 ZNF608Q9ULD9 1512 aaPredicted RBP22.1■■□□□ 1.13
APOBEC3A-205ENST00000618553 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
APOBEC3A-205ENST00000618553 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.11
APOBEC3A-205ENST00000618553 ARHGEF11O15085 1522 aa22.01■■□□□ 1.11
APOBEC3A-205ENST00000618553 IFT140Q96RY7 1462 aa22.01■■□□□ 1.11
APOBEC3A-205ENST00000618553 ABCA10Q8WWZ4 1543 aa21.99■■□□□ 1.11
APOBEC3A-205ENST00000618553 SOGA1O94964 1423 aa21.97■■□□□ 1.11
APOBEC3A-205ENST00000618553 EIF4G3O43432 1585 aaKnown RBP21.93■■□□□ 1.1
APOBEC3A-205ENST00000618553 RAD54L2Q9Y4B4 1467 aa21.93■■□□□ 1.1
APOBEC3A-205ENST00000618553 MAPK8IP2Q13387 824 aaPredicted RBP21.92■■□□□ 1.1
APOBEC3A-205ENST00000618553 CHD1O14646 1710 aa21.9■■□□□ 1.1
APOBEC3A-205ENST00000618553 CYB5RLQ6IPT4 315 aa21.9■■□□□ 1.1
APOBEC3A-205ENST00000618553 EEA1Q15075 1411 aa21.89■■□□□ 1.1
APOBEC3A-205ENST00000618553 ABCA5Q8WWZ7 1642 aa21.88■■□□□ 1.09
APOBEC3A-205ENST00000618553 AQRO60306 1485 aaKnown RBP eCLIP21.84■■□□□ 1.09
APOBEC3A-205ENST00000618553 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
APOBEC3A-205ENST00000618553 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
APOBEC3A-205ENST00000618553 ARAP1Q96P48 1450 aa21.79■■□□□ 1.08
APOBEC3A-205ENST00000618553 GAPVD1Q14C86 1478 aa21.76■■□□□ 1.07
APOBEC3A-205ENST00000618553 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
APOBEC3A-205ENST00000618553 FBLN2P98095 1184 aa21.75■■□□□ 1.07
APOBEC3A-205ENST00000618553 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
APOBEC3A-205ENST00000618553 PBRM1Q86U86 1689 aa21.74■■□□□ 1.07
APOBEC3A-205ENST00000618553 TDRD9Q8NDG6 1382 aaKnown RBP21.73■■□□□ 1.07
APOBEC3A-205ENST00000618553 GRIN2BQ13224 1484 aa21.69■■□□□ 1.06
APOBEC3A-205ENST00000618553 CUL7Q14999 1698 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms